G83608


Basic Information

Item Value
gene id G83608
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 3748658 ~ 3750902 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU104320
GGGGTCTTCTAGCAGAGCTCAAGTCTCATCTCTGACTCCACATTTTATTATCCGAGCTTGTCCTTGACTTCCTGTTAGCCAATCGTCTGCTGACGAGCTCAGTTACTTCAACACAAACTCCAAAGTTTCAGATCACTTGGACGTGATTTTTCCCACAGGCGCTGAATGTGTGCAATGCGAGAGGAACGCCTCCGCCGGCGCTCCTGGCTCAGCCCCCCGGCTCTGTAACCCAGGACTAACACACGGTGAGCAGGACCCGATCATTACAGCATGGCACAGAACAGAAGCAAAATAACCACAAACCTGGTGTATTACAGGTTCAATGTAAGGAAGACACTCGTCTGCTTCCCTGGCTCAGGGGGGCACGGGGGAACAGTGCGTCTGAGAACAGCCCACGCTGCAATCGGGTCCAGCGCCTGGGCACAGACGAGCCGTGACGCCCGAGTCCCTCTCATTTGTGTTGCACACCTGATATGAACTTCCTCCAGCACAccttcaatttgaaaataacactTTGCTTATATAACTGGTATCAGCctacaggacacacacacacacacacacacacacacacacacacacgttatgGTTTGGGAACATGTGAATGAACAAGTCCCTGCTGGACATGTGGCGTCTCCTTCCCCAATCCCTGTAAACCAGGACTTCCTGATCCACATGTTGTGCAACGCTCTTCCCAAGAGCCTCAGCCGTTCCTCGGCCCGCGGCGGCAGCTGCAGAGCGCCTCGCGTGTCAGGAAGGGCATCGTTTCACCCGTTCAGTTATTGTACAGTTATTGTATTGTGCCTCCGTTTCTATTACACTCACGTCTGTGAATAAAGCAGGACTAACAAGTATTTGGattcagccttttttttttttaaatccaacacTGAACAATTCAAACTTTCTTTTGAGGTTTTCCTGTGTACAAAAATACCCGTATGAAGCTCTCCACACAGTCCTTGAAAGAGGAAAGTGTGAGACGGACACACTGCAGTTCAGCAAGGGACCGAGAAGAGCGGAGGCTGAATCCATTCCAGGCCAAACCAGCTGCGATGGTTGTGATCCGTGTCCTTTGATCCTGATCACACGATTGACAGTACAGAGGCCCCGCTGGTTTTGCGGTTGCGATTACTTAATTACTACACTATCGTTCCGGGATGCGAATTTAAACATAACTAACTCCTATCGGCACTAACGCGGCACTATTGACAGCCGTCAAGAGCAACAGCACGTGGGGCGAGTCACATCACACCGAGACACACAGACTCCAGGGCCGGGGCCGAGGCCCTCACCCGGGTCTCTGCGCAGCGCCGTACACAGACCGTCAGCCGAGACAGAAGGTGGAAGTCGGTGGGTCTCTGTGCCGAGAGAAACGGGACAGGATGTGTCTCTCCCACTGCGCCGACGCTCGGTTCTGTCGGCCTTGGATTCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104320 True 1437 lncRNA 0.52 3 3748658 3750902

Neighbor

gene id symbol gene type direction distance location
AMCG00021105 NA coding downstream 12305 3733756 ~ 3736353 (-)
AMCG00021092 efnb1,LOC106603306,LOC106567780 coding downstream 459918 3287994 ~ 3288740 (-)
AMCG00021091 LOC106603306 coding downstream 483447 3255379 ~ 3265211 (-)
AMCG00021086 NA coding downstream 1165041 2583330 ~ 2583617 (-)
AMCG00021085 NA coding downstream 1171704 2522860 ~ 2576954 (-)
AMCG00021110 NA coding upstream 28919 3779821 ~ 3801007 (-)
AMCG00021111 NA coding upstream 59509 3810411 ~ 3813043 (-)
AMCG00021109 NA coding upstream 65791 3816693 ~ 3825283 (-)
AMCG00021115 LOC106567772,LOC106603301 coding upstream 486135 4237037 ~ 4260026 (-)
AMCG00021116 NA coding upstream 511127 4262029 ~ 4281357 (-)
G83607 NA non-coding downstream 1146 3747158 ~ 3747512 (-)
G83602 NA non-coding downstream 13451 3734677 ~ 3735207 (-)
G83596 NA non-coding downstream 30468 3710153 ~ 3718190 (-)
G83539 NA non-coding downstream 326212 3422202 ~ 3422446 (-)
G83517 NA non-coding downstream 660703 3087694 ~ 3087955 (-)
G83667 NA non-coding upstream 370347 4121249 ~ 4121486 (-)
G83673 NA non-coding upstream 374589 4125491 ~ 4125701 (-)
G83764 NA non-coding upstream 988194 4739096 ~ 4739884 (-)
G83773 NA non-coding upstream 1071156 4822058 ~ 4859229 (-)
G83833 NA non-coding upstream 2224572 5975474 ~ 5975781 (-)
AMCG00021090 NA other downstream 1029739 2677585 ~ 2718919 (-)
G83428 NA other downstream 1289279 2457001 ~ 2459379 (-)
G83313 NA other downstream 1770690 1973160 ~ 1977968 (-)
G83761 NA other upstream 952353 4703255 ~ 4751235 (-)
G83864 NA other upstream 2793590 6544492 ~ 6546577 (-)
AMCG00021153 NA other upstream 3364518 7115420 ~ 7122491 (-)
AMCG00021249 NA other upstream 8342575 12093477 ~ 12100854 (-)
G84814 NA other upstream 8776191 12527093 ~ 12527694 (-)

Expression


Co-expression Network