G83761


Basic Information

Item Value
gene id G83761
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 4703255 ~ 4751235 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU104502
ATGTGTGCATCACAGCATTATAAAAGTACAACAGATGGATATCAATGAATACTGCTGCTGGACAGTTTTAGGTAAACCAAGTTTATTTGCTCAAGAAGTGTTGGAAtaaattcattttgtatttttctcaacaGTTCAGAATTCAAAATTAGAACAGAGACTTGTTCTGGTGATGCAGTTTGCTGAGGTGCTATGGTATCAAAAAGATTTAGCTTACACTTTTCtaaacatgtataaacatatCATTAACTTCCGTATTCATGGCTATAAAAAGACCCATCAGATCCACCCCACTGTTGTTAAAAATGGCAGAAAGAGGTCAGTCTTGGATTTTCAGGACATTTCTTTTCTCCAAATCAttcatttctttcaaaataaggGCAACATTGTAGCGGAGTTCCTGGAACTTGGACACTGgtacTCAAAGCGATGGGGGATTCCATTCGTTAACTTCATCTGCATGAGAATCGAAGGTTGCAAGGCACGGGACAAggagctgcaatgaaaacacGTCTGTTTAGGCATCTTGAAAATCTGTATCTGTCGAGCATTTTAGAAGATGGTCCATAGTCATTAAAGATGCTG
>TU104504
ATGTGTGCATCACAGCATTATAAAAGTACAACAGATGGATATCAATGAATACTGCTGCTGGACAGTTTTAGGTAAACCAAGTTTATTTGCTCAAGAAGTGTTGGAAtaaattcattttgtatttttctcaacaGTTCAGAATTCAAAATTAGAACAGAGACTTGTTCTGGTGATGCAGTTTGCTGAGGTGCTATGGTATCAAAAAGATTTAGCTTACACTTTTCtaaacatgtataaacatatCATTAACTTCCGTATTCATGGCTATAAAAAGACCCATCAGATCCACCCCACTGTTGTTAAAAATGGCAGAAAGAGGTCAGTCTTGGATTTTCAGGACATTTCTTTTCTCCAAATCAttcatttctttcaaaataaggGCAACATTGTAGCGGAGTTCCTGGAACTTGGACACTGgtaccttaaaaaaaaagaaagaaaagaaaacacaaaacaaaaacaaacaaacaaacacttcttTAACTGATATTTCATAAACTAGCAAATGCTCACCTACTGGTCAAGTTTGTTGCCTGAGTTGAAGCTACATCTTTGCAGGGTGAAAataagtttttatatataataattataattaatacatttatgtataataatacatattattacatATACCCTAATGAGCTGAGGTTGAATATGCTGCCTGACTACTGTGCTTATTTGTGGTCTCAGAGAcagcagtggggggggggggggggggggggggggggtagatCTAAATATGCACATTTCCTGTAATGTTGTATTAGTGTACTATTagcttaaatacatttcaatctgGTACCTGTTTACCAGGAGACAGAAAATGTGCACATAAatgattatataaataatgtaatgcatctgTTGATAAGCAGAGACAACCAcccattatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatagctttgtgacatggtgcattatcctgctggaagtagccatgatggatccatgttctctcacctttctttcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggttaaattaagcaattttgagcgtggcatggttgttggtgccagacgggccggtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104502 False 585 TUCP 0.38 2 4748781 4751235
TU104504 True 1220 lncRNA 0.37 4 4703255 4751235

Neighbor

gene id symbol gene type direction distance location
AMCG00021122 LOC106604955,LOC106611984 coding downstream 237597 4463840 ~ 4465658 (-)
AMCG00021121 il1rapl2,LOC106604955 coding downstream 250416 4451684 ~ 4452839 (-)
AMCG00021119 il1rapl2,LOC106604955,LOC106611984 coding downstream 329200 4359792 ~ 4374055 (-)
AMCG00021120 NA coding downstream 352169 4349252 ~ 4351086 (-)
AMCG00021117 NA coding downstream 366543 4292591 ~ 4336712 (-)
AMCG00021134 LOC100697681,LOC101472898,LOC102787112,LOC102308013,LOC102213142 coding upstream 1646393 6397628 ~ 6421738 (-)
AMCG00021136 NA coding upstream 1698188 6449423 ~ 6450172 (-)
AMCG00021135 NA coding upstream 1787307 6538542 ~ 6542302 (-)
AMCG00021141 tmm47,LOC105912477,LOC105030438,LOC106603112,LOC107662487,LOC103353305,LOC101483903 coding upstream 1908302 6659537 ~ 6670212 (-)
AMCG00021145 pak3,LOC106563430 coding upstream 2064700 6815935 ~ 6844522 (-)
G83673 NA non-coding downstream 577554 4125491 ~ 4125701 (-)
G83667 NA non-coding downstream 581769 4121249 ~ 4121486 (-)
G83608 NA non-coding downstream 952353 3748658 ~ 3750902 (-)
G83607 NA non-coding downstream 955743 3747158 ~ 3747512 (-)
G83602 NA non-coding downstream 968048 3734677 ~ 3735207 (-)
G83773 NA non-coding upstream 70823 4822058 ~ 4859229 (-)
G83833 NA non-coding upstream 1224239 5975474 ~ 5975781 (-)
G83839 NA non-coding upstream 1513101 6264336 ~ 6264571 (-)
G83860 pgrmc1 non-coding upstream 1779701 6530936 ~ 6531273 (-)
G83862 NA non-coding upstream 1817944 6569179 ~ 6636907 (-)
AMCG00021090 NA other downstream 1984336 2677585 ~ 2718919 (-)
G83428 NA other downstream 2243876 2457001 ~ 2459379 (-)
G83313 NA other downstream 2725287 1973160 ~ 1977968 (-)
G83864 NA other upstream 1793257 6544492 ~ 6546577 (-)
AMCG00021153 NA other upstream 2364185 7115420 ~ 7122491 (-)
AMCG00021249 NA other upstream 7342242 12093477 ~ 12100854 (-)
G84814 NA other upstream 7775858 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 7968629 12719864 ~ 12801586 (-)

Expression


Co-expression Network