G83864


Basic Information

Item Value
gene id G83864
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 6544492 ~ 6546577 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU104623
tgcTGCTATGCATTTTGGTTATGAAATATCTAATGGACATATTTCTTCAATTGCAACACACAAAAGGggtttgtaattatttaaataagaaaacctAATGATCCAGGAAACAATATTTGGGAAATCTACTATGCTTGTTGTGAATTACTTCACTGCTATGGACGGGACATACAGACAGAACTTGTAGACCTTGTGCGTTTCAATCAATCTGTTACGTAGATGATAACAATGATTGGCTTAATTAGTCAAGACCAACATCTTTGTCCACCACCTGAACTGAAGACACCTAAGCAAATAATGACAGGCTGGGGACCTCCAGAAGATGCACTTTTGGAGACTGTTGCATACACTGTAtccatttagtttatttgttgCTTTCAAAAGTcaagaataaacacaatttCTTGCTACTTATAGGGCTAATTTCACACTCAGATTTAGCACTATTATTGGACACCCCAGTGTTATTTAGGCAGATTAGTCTGTGGAACCAGCTGACAGTGTTTAAAGAGACGTGAGGTTTCACACTCGTGTAAGTCATCGGAATGAATGTGTACAACTGCAAACAACCTGCACGTCAAGCTGTGAGAATACAAAGCAGCCTTTTAGTCAAGgtttaaacttaatttattacatCAGTTATGACATTCTGCCACAAGAAGTGGCACAATCTGACAGCACAAGAAGATAGTATGTGTTCATCCACCAAGTAGTACAGTTCAAACTATTTTAGTTAACTTTTAAAGTGAAAAGCCTTGGTTTCTTCACTCCTGTCTCCATTCTTTGGGGGTGACCTTCCCAACGGGCGACAGATTCCATGTAATGCCGGTCTGTGTTGCTACCTGTaacaataaaaatcaaatcaataatgtGTACCATGTCACAAAGTAGTCACCTAACTAGAACTTAAAACTGCCCCTCCATACACTTACTTACAAAGGCTTTAGGATGTTTcatgcacatattttaattggttttccaATATTCAGAAATATAGAATTTCATGCAAAGACCGAAGTAAGAACTTTACTAATTAGTAATTGAAATATCttgcaaagtaaatgtattagtCACTAAAGTGGTTTGAGAGGAAGACAACATTCAGAATTGAGATTTGCAACTGAGAAGTGATTCACATGATGTTGTATCTGGTTTCCAATCCCTCATTCCCCATCCTTCCTCAGATGTATGAACAGTGAGGGTGTTTCCTGGTTTAGGACAGTCCGAGGCTTTGCAGAGACTTACAAAGGACCAGACTGCGCCGCAGAACAGCATCCCGGACACCATCAGGATGTTGCCATACTTGTCATGGAAGTCGGGCCCGGCTTTGTGATGGGTCTGTCGGACCGCAGCCTGGCGGACACCCCGGGGCTAAGGTTCAATGCAGTCTTTGCAAAACGGAACATGTTCGGATCTTGTTGTATCTTCACCGCAACCTCCCTCTCGCTGCACCAAATAcccttgaaagaaaaaaataaatcaagatggCTGCTTACACCGGAAGAAAtcgcaaaaaaatatatattaaaa

Function

GO:

id name namespace
GO:0070546 L-phenylalanine aminotransferase activity molecular_function
GO:0080130 L-phenylalanine molecular_function
GO:0008793 aromatic-amino-acid molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU104623 True 1530 TUCP 0.40 2 6544492 6546577

Neighbor

gene id symbol gene type direction distance location
AMCG00021135 NA coding downstream 2190 6538542 ~ 6542302 (-)
AMCG00021136 NA coding downstream 94320 6449423 ~ 6450172 (-)
AMCG00021134 LOC100697681,LOC101472898,LOC102787112,LOC102308013,LOC102213142 coding downstream 122754 6397628 ~ 6421738 (-)
AMCG00021125 fam199x,LOC100194523 coding downstream 1807278 4728373 ~ 4737214 (-)
AMCG00021122 LOC106604955,LOC106611984 coding downstream 2078834 4463840 ~ 4465658 (-)
AMCG00021141 tmm47,LOC105912477,LOC105030438,LOC106603112,LOC107662487,LOC103353305,LOC101483903 coding upstream 112960 6659537 ~ 6670212 (-)
AMCG00021145 pak3,LOC106563430 coding upstream 269358 6815935 ~ 6844522 (-)
AMCG00021154 LOC106563513 coding upstream 505959 7052536 ~ 7063256 (-)
AMCG00021152 tmem164,LOC102783906 coding upstream 532601 7079178 ~ 7079639 (-)
AMCG00021155 NA coding upstream 541424 7088001 ~ 7101704 (-)
G83860 pgrmc1 non-coding downstream 13219 6530936 ~ 6531273 (-)
G83839 NA non-coding downstream 279921 6264336 ~ 6264571 (-)
G83833 NA non-coding downstream 568711 5975474 ~ 5975781 (-)
G83773 NA non-coding downstream 1685263 4822058 ~ 4859229 (-)
G83764 NA non-coding downstream 1804608 4739096 ~ 4739884 (-)
G83862 NA non-coding upstream 22602 6569179 ~ 6636907 (-)
G83878 NA non-coding upstream 32277 6578854 ~ 6580419 (-)
G83901 NA non-coding upstream 96645 6643222 ~ 6643523 (-)
G83931 NA non-coding upstream 265655 6812232 ~ 6813434 (-)
G84052 gabrb4,LOC108429394,LOC103032374,LOC107727281,LOC107571379 non-coding upstream 844045 7390622 ~ 7390915 (-)
G83761 NA other downstream 1793257 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 3825573 2677585 ~ 2718919 (-)
G83428 NA other downstream 4085113 2457001 ~ 2459379 (-)
G83313 NA other downstream 4566524 1973160 ~ 1977968 (-)
AMCG00021153 NA other upstream 568843 7115420 ~ 7122491 (-)
AMCG00021249 NA other upstream 5546900 12093477 ~ 12100854 (-)
G84814 NA other upstream 5980516 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 6173287 12719864 ~ 12801586 (-)
G84952 NA other upstream 7080758 13627335 ~ 13627747 (-)

Expression


Co-expression Network