en1a (LOC107670337,LOC107720935)


Basic Information

Item Value
gene id en1a
gene name LOC107670337,LOC107720935
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5105850 ~ 5108390 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248313.1
GCTCCCCGCTCATCTATGTGATCTGATGTGTTTCCGGTTAGTGGCCACTAAGAGTGGTTGTGCACGAGCAGAGTTCCAGAAAAAGAGGTGTCAAACCCAGGTCTGGCAACGCGGAGGGCGCAGGAAAGCCGCGCGCCGTCGGTCCCGTCCGAAGCGACAGCACGCGAGCGTCGCCTCCCCACCACACGTCAACAAGTCGACTCGCAAAAATGTTCTCACTTTCGCGGCAAATCAGCGCGTTGTCATGGATACCTAGATAGCGTTTCCCGGTTCTTTTGTCGTGTTTGGAACGGGACGGGTCTTTCATCTCTCGAAGAGGGGAGCCGGTATGGATCAGAGCGAAGATGACAGCGTCTCCCTGTCACCGAGCCTGCCCTCTCCGCCTCTGCTCCCGCTGCAGGCGGCGCACCACAGAAACACCAACTTTTTCATCGACGACATCCTCAGACCGGACTTCGGCTGCAAACGGGAGCGTCGTCCGGCGGTCCCCGGCGCTCCGTGTCCGGACTCCGGCTGCGGTACCGACGGCGTTTCGTCGTCTGCCTCGTCCGCCGGCTCGTCCCCGGCCAGAAGAAGGCGTTCCAAGGCAGACGAGGCGGACAGAGGGGACGCGGGGAGACCCGGGGTCGTGTCGGCGTCTTCTGCTGCTCAGAATAGCCCGGGTGAAGAGTCCTCGCCCGGTAAAGACGGCCAGCAGTTTATGTGGCCCGCCTGGGTTTATTGCACGAGATACTCTGATCGACCTTCATCTGTCTCCACGCAAGGCCCGAGGACCCGGaaattgaaaaagaagaaaaacgaGAGCGAGGACAAGCGACCCAGAACGGCGTTCACGGCCGAGCAGCTCCAGAGACTGAGGGCCGAGTTCCAGGCGAGCCGCTACATCACGGAGCAGCGGCGGCGGGCCCTGGCGCGCGAGCTCCAGCTCAACGAGGCGCAAATCAAAATCTGGTTCCAGAACAAACGGGCTAAAATCAAGAAGGCCGCCGGACTCAAGAACGACCTGGCGATGCAGCTCATGGCGCAGGGACTGTACAACCATTCCACCACCACCGTTCAACAAGACGGCAACTAGCCGCGAAGACAGACTCCGGTCACCGGAGCAGACGGAACGTTATAGTTACTTCATCGACctgtttggtctttttttttttaccacaaaaaCGGACCGCGCTGGTTGTTGTTTGCCGCTAGTCAAATCAGACACTTTACATGTAatcatgatttgttttttatgctgtttaaagcaatatttcttCGTGCCAAAGATGTTATTCGATCAAAGTAtccagtatatatttttttctttgattatgGGGATGCGGGTATAATGGGAGACTTATCCGATATCAGATATTATTCTTTGCgagatatttaatattgtatccAAATAAACCTCTTTTGTACATGCAAA
>XM_043248314.1
GTGATCTGATGTGTTTCCGGTTAGTGGCCACTAAGAGTGGTTGTGCACGAGCAGAGTTCCAGAAAAAGAGGTGTCAAACCCAGGTCTGGCAACGCGGAGGGCGCAGGAAAGCCGCGCGCCGTCGGTCCCGTCCGAAGCGACAGCACGCGAGCGTCGCCTCCCCACCACACGTCAACAAGTCGACTCGCAAAAATGTTCTCACTTTCGCGGCAAATCAGCGCGTTGTCATGGATACCTAGATAGCGTTTCCCGGTTCTTTTGTCGTGTTTGGAACGGGACGGGTCTTTCATCTCTCGAAGAGGGGAGCCGGTATGGATCAGAGCGAAGATGACAGCGTCTCCCTGTCACCGAGCCTGCCCTCTCCGCCTCTGCTCCCGCTGCAGGCGGCGCACCACAGAAACACCAACTTTTTCATCGACGACATCCTCAGACCGGACTTCGGCTGCAAACGGGAGCGTCGTCCGGCGGTCCCCGGCGCTCCGTGTCCGGACTCCGGCTGCGGTACCGACGGCGTTTCGTCGTCTGCCTCGTCCGCCGGCTCGTCCCCGGCCAGAAGAAGGCGTTCCAAGGCAGACGAGGCGGACAGAGGGGACGCGGGGAGACCCGGGGTCGTGTCGGCGTCTTCTGCTGCTCAGAATAGCCCGGGTGAAGAGTCCTCGCCCGGTAAAGACGGCCAGCAGTTTATGTGGCCCGCCTGGGTTTATTGCACGAGATACTCTGATCGACCTTCATCTGGCCCGAGGACCCGGaaattgaaaaagaagaaaaacgaGAGCGAGGACAAGCGACCCAGAACGGCGTTCACGGCCGAGCAGCTCCAGAGACTGAGGGCCGAGTTCCAGGCGAGCCGCTACATCACGGAGCAGCGGCGGCGGGCCCTGGCGCGCGAGCTCCAGCTCAACGAGGCGCAAATCAAAATCTGGTTCCAGAACAAACGGGCTAAAATCAAGAAGGCCGCCGGACTCAAGAACGACCTGGCGATGCAGCTCATGGCGCAGGGACTGTACAACCATTCCACCACCACCGTTCAACAAGACGGCAACTAGCCGCGAAGACAGACTCCGGTCACCGGAGCAGACGGAACGTTATAGTTACTTCATCGACctgtttggtctttttttttttaccacaaaaaCGGACCGCGCTGGTTGTTGTTTGCCGCTAGTCAAATCAGACACTTTACATGTAatcatgatttgttttttatgctgtttaaagcaatatttcttCGTGCCAAAGATGTTATTCGATCAAAGTAtccagtatatatttttttctttgattatgGGGATGCGGGTATAATGGGAGACTTATCCGATATCAGATATTATTCTTTGCgagatatttaatattgtatccAAATAAACCTCTTTTGTACATGCAAA

Function

NR:

description
homeobox protein engrailed-1-B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248313.1 True 1414 mRNA 0.55 2 5105850 5108390
XM_043248314.1 False 1385 mRNA 0.55 2 5105867 5108390

Neighbor

gene id symbol gene type direction distance location
marco NA coding upstream 6474 5094242 ~ 5099376 (+)
c1ql2 c1ql2,LOC107670317,LOC107689526,LOC107549752,LOC107752616,LOC104939125 coding upstream 36525 5066823 ~ 5069325 (+)
LOC122351173 LOC107670300,LOC107720934,LOC107576887,LOC107549889 coding upstream 46221 5058563 ~ 5059629 (+)
LOC122351196 sctr,LOC107549745,LOC107747236,LOC107752604,LOC107670318,LOC107560812,LOC107689516 coding upstream 99054 4992313 ~ 5006796 (+)
LOC122351440 ino80d,LOC107747229,LOC107752578,LOC107670308,LOC107561721 coding upstream 252711 4840938 ~ 4853139 (+)
usp37 usp37,LOC107670323,LOC107549772 coding downstream 19747 5128137 ~ 5138150 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding downstream 34018 5142408 ~ 5148171 (+)
cd58 NA coding downstream 261213 5369603 ~ 5376786 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding downstream 268861 5377251 ~ 5386269 (+)
si:dkey-11f4.14 NA coding downstream 278082 5386472 ~ 5391186 (+)
G67888 NA non-coding upstream 4186 5101359 ~ 5101664 (+)
G67882 NA non-coding upstream 21549 5084043 ~ 5084301 (+)
LOC122351367 NA non-coding upstream 53702 5050450 ~ 5052148 (+)
G67872 NA non-coding upstream 80488 5022240 ~ 5025362 (+)
G67867 LOC107752614,LOC107689494,LOC107747239,LOC107670320,LOC107560813 non-coding upstream 94413 5006890 ~ 5011437 (+)
G67955 NA non-coding downstream 188265 5296655 ~ 5297005 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding downstream 198628 5307018 ~ 5313560 (+)
G67970 NA non-coding downstream 230579 5338969 ~ 5341289 (+)
G67979 NA non-coding downstream 265019 5373409 ~ 5392379 (+)
G68013 NA non-coding downstream 359151 5467541 ~ 5562170 (+)
LOC122351471 NA other upstream 77211 5025563 ~ 5028639 (+)
c9h2orf76 zgc:101851,cunh2orf76,LOC107670315,LOC107747242,LOC107560816,LOC107752580,LOC107549781,LOC107689495 other upstream 87512 5015470 ~ 5018338 (+)
rbm45 rbm45,LOC107716918,LOC107752596 other upstream 388617 4709053 ~ 4717233 (+)
G67717 LOC107716922,LOC107657385,LOC107725823,LOC107671308 other upstream 543248 4523286 ~ 4562602 (+)
hoxd4a hoxd4a,hoxd4,LOC107600706,LOC107671320 other upstream 692690 4409895 ~ 4413160 (+)
ndufb3 ndufb3,LOC107752587,LOC107549774,LOC107549916,LOC107689503,LOC107720946 other downstream 31755 5140145 ~ 5142152 (+)
trnar-ccu_4 NA other downstream 296839 5405229 ~ 5405301 (+)
trnar-ccu_5 NA other downstream 297513 5405903 ~ 5405975 (+)
trnar-ccu_6 NA other downstream 299086 5407476 ~ 5407548 (+)
trnar-ccu_7 NA other downstream 299859 5408249 ~ 5408321 (+)

Expression


Co-expression Network