LOC122351517


Basic Information

Item Value
gene id LOC122351517
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 6002775 ~ 6004352 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248613.1
caaatatttactaaatgacagaactgcaaaaaaaaaaaaaaaaaaaaaaaaaagaacactaaCAGTCACACAACCATCCTGCAATACAGATGCTGTATGTGCTTTACAATCCTCGCAGCAAAACCACTTCTTGCTTcttgcaatataaaatattacatgaatagTGTCTCATGTTGTTCCCCTTACTGTTTGTGAAATTAAGCTTCGATTTGAGCAGCATCTGGTTTCCTCCATGCCACTGCAAAACCATGCCAAAAGTAGTTGTAGTTTTCTGGTGTCCCAGTAATAACTTATCGCACAAATTCTGTATATAATTACAGCAGGCATACTGCCTGTCATTTACGTAATGAACACAATAAAAGAGCAAGCATTGTTAAAAGTGGTTttgaaaacattgttttcataatttcaaATAATCTTTTCTTTTACTTACACTTTTCTTAAAGTTTGAATTTTCAAGTTTATCTCTTAATAAACTACATCTTCAGCTGCTACACCATTGGTGATTAGCTGAGTGGATTCAGCGTGGTGTGTGAAGAGAGACATATAGATGATGATCTTAAATTCATCAGGTGGCAATGAAATATGTCACAAAGACCCAGCACATGGACTGATTGAGATCACTCTCACCATCCTGGCCGACAAAGGTCACATAGTGCCAGAGATAATCAGGCTCTTGGAGTGGACGGACCACCCTGACCACTTCATCCTGGTCCTGGAATGTCCCTCTCCCTGTGAAAACCTGGTGGAGTTCATCAGGCGTCACGGTGGAAGCCTCGATGAAGAAACAACAAGGCAGATCATGTGGCAGGCGGCtcacaataaaatgcattatataaaatacaataataaagacTTGTCGCAAGGGGGCGATAGTGTTTCTGTTTATTGTCTagaccagtggttttcaaacctgtcctggaggCACCCCGTCCTGCACCTGTTTTAAATCAGCTCGTTATTAGAGACTGCAAGAACTAAATTGCGTTTGTGATATGGAAAACAATTACTGAGATCTGAAATCTGAATTTGAGGATGCTGCCACAATtacaaatgtgaaaatacaaagaaaaacgCATTACATTACAGCAGAGAGATACACAACAATATGCAGAGctccacactcacacacacttttacaaaGACAAGCTAGACCTGTACTATTATAATGTTTACATGTATCTTTCAGTTGTACGAATGGTTATAGTCATAATTTATAGTATGAACTATGGATTTATTCTTACATTAATAGTCATTGCAGGATTTTATGTACTGCAGTTGAGTATTATGTAACGTATTTTGTACTagatcttttgtaacattagatACATCACAAATATGCAGGATTCgctattatttacatatatgtacagtacataCC

Function

GO:

id name namespace
GO:0019787 ubiquitin-like protein transferase activity molecular_function
GO:0004842 ubiquitin-protein transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248613.1 True 1381 mRNA 0.37 3 6002775 6004352

Neighbor

gene id symbol gene type direction distance location
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding upstream 138 5983889 ~ 6002637 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding upstream 137401 5816845 ~ 5865374 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding upstream 270705 5629122 ~ 5732070 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding upstream 475180 5523560 ~ 5527595 (+)
si:dkey-11f4.14 NA coding upstream 611589 5386472 ~ 5391186 (+)
LOC122351516 LOC107720938,LOC107752607,LOC107689504,LOC107549895,LOC107549742 coding downstream 1000 6005352 ~ 6030322 (+)
LOC122351469 col4a1,LOC107557928,LOC107715912,LOC107688716,LOC107702910,LOC107721605 coding downstream 172721 6177073 ~ 6193230 (+)
irs2b irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 coding downstream 242461 6246813 ~ 6261089 (+)
pdzk1 LOC107688772,LOC107721583,LOC107703056,LOC107551063,LOC107716762,LOC107602882 coding downstream 705854 6710206 ~ 6717797 (+)
st6gal2a st6gal2a,LOC107721598,LOC107688722,LOC107676409,LOC107716800,LOC107602911,LOC107551073 coding downstream 759517 6763869 ~ 6813022 (+)
G68085 NA non-coding upstream 88494 5834140 ~ 5914281 (+)
G68101 LOC107670329,LOC107549899,LOC107730347,LOC107730410 non-coding upstream 110568 5890348 ~ 5892207 (+)
G68069 NA non-coding upstream 205283 5796094 ~ 5797492 (+)
G68058 NA non-coding upstream 234515 5766339 ~ 5768260 (+)
G68056 NA non-coding upstream 237901 5746855 ~ 5764874 (+)
G68160 NA non-coding downstream 84128 6088480 ~ 6103697 (+)
G68167 NA non-coding downstream 137267 6141619 ~ 6165064 (+)
G68195 NA non-coding downstream 290936 6295288 ~ 6323460 (+)
G68246 NA non-coding downstream 595175 6599527 ~ 6599806 (+)
G68247 NA non-coding downstream 668753 6673105 ~ 6673650 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 29652 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 117022 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 545246 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 545512 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 545932 5456772 ~ 5456843 (+)
si:ch211-167j6.3 NA other downstream 2336943 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 2426759 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 2456392 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 2859035 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 2862745 8867097 ~ 8871633 (+)

Expression


Co-expression Network