si:dkey-11f4.14


Basic Information

Item Value
gene id si:dkey-11f4.14
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5386472 ~ 5391186 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249338.1
CTCACTGCTAGTCTCACTTCCGGTTCGCTGGGGAAGGGCGGGCGGACCGGTTTTACCTGGAACAGCTGAGGTAACACgaaagtgaaagaaaatgaaaaaactcAAGGGAGTGTTTAATCTTTTCGTCTGGGTAATATTATCAAGATTCCATGCTGTATCTTCTATAATCTATGTCGAGGATGGGAAGAGTGTGACTTTAAATCCAAATATACAAGGAAATCCTGAAGACATTTTGTGGACATTCAATGGAAATAAGGCGGCTGAACGTGATTTGAACGAATTTCTAGAATATGGTCAGTTCAGAGGAAGGTCAGAGATTGACATCTCTACTGGGCAGCTCACTGTCCTCCGCGCCACCAGCCAGGACAGTGGTGTTTATAAGTCTGCAGTACAGATTGATGGAAAACTGcaaatgtatgaaaatgaaGTTCGGGTTATTGATGCTGTGCAGGAGCCCAATGTGACCTGTACACTGAACAATGTTACAGAATCAAAAACACTGTTCTGCTCAGTTTCATCTCGGTTCCTAACAACTTTTGAATGGACTGGATCAAATTCGTTAAAACGATCTGGGCAAGAGCTCGATATCAGCAAGGTGGAGAAGCCTGATTCAGTCTTTATTTGCACTGTGAAAAATGAAGTGAGCCAAAAGAGCACCAGCTTCACTCTGAAGGACTGCCCCGAAGGTAAACCACCACATGAGAATGTCATTCTACCAGTTATAATTATCATAGCTTGTGTTGTTATTATCGTGGGGAGTGCAGCtgccatttatttcatttaccgAAGAAGAAACAAGGGTAAGAAAGGGGAAGATCTAAACCATGCTGTCAGAAACAATTATGATCTAGAGGACAATGCAGAACAGGACACAAATGAAGATAGAGATGAGTTTGAAaatgatgaagaaacagaaatgaTGAGTGGTAATGAATACAGGAAAGAGCCAAACCAGGTTCTCAAAAACAATCATGTTTCAGAAGACAATGCAGAATATAAGGACAtaaatgaagatgaagaggagtATGAAAATAAGGAAGAAACAGAAATGATGGCTGATTTTAACTGTAGGGAAGAGGCAAACCAGGCTCTCAGAAGCAATCATGTGTCAGAGGACAGTGCAGAAGAGGATTTAAAGAAAGATAAAGAAGAAACCGAAatgatgcattattttaaatgtaGTGAGGATGTTGCAGAGAACTATGAAGAACAGGACATAAATCAAGAtgaagagtgaaaaaaaaaaaaaaaaaaaaaaaaaaaaacgataaattTAGTACTAGCAAAGTTGTAAGCAggcttgtatttaaaaaaaaaaaaaaaaaaaaaattatatttaggcTGGAAAAAATATGCATGACTTGTACAAAAGGATACCaccagctatttaaaaaaaaaccccaaggAATCTTAATTTTACTTTTCCCTGTGGGAAACTACTTGCATACTAAATTGTATTTCTTGTAAACATATTGAATATGTGTTCTAGGCCAAGATCTTCAGTTATGAAGAAAATAAGCAGGAAATCACAGCCCAAGACCTCACTGGACCCACACAAGACAGTCCTAACGAGTAACAAGTTAACTGAGCAGCAGACTCAGACatagcactttacaataaggttcattaaagaattaacttaaa
>XM_043249339.1
CTCACTGCTAGTCTCACTTCCGGTTCGCTGGGGAAGGGCGGGCGGACCGGTTTTACCTGGAACAGCTGAGGTAACACgaaagtgaaagaaaatgaaaaaactcAAGGGAGTGTTTAATCTTTTCGTCTGGGTAATATTATCAAGATTCCATGCTGTATCTTCTATAATCTATGTCGAGGATGGGAAGAGTGTGACTTTAAATCCAAATATACAAGGAAATCCTGAAGACATTTTGTGGACATTCAATGGAAATAAGGCGGCTGAACGTGATTTGAACGAATTTCTAGAATATGGTCAGTTCAGAGGAAGGTCAGAGATTGACATCTCTACTGGGCAGCTCACTGTCCTCCGCGCCACCAGCCAGGACAGTGGTGTTTATAAGTCTGCAGTACAGATTGATGGAAAACTGcaaatgtatgaaaatgaaGTTCGGGTTATTGATGCTGTGCAGGAGCCCAATGTGACCTGTACACTGAACAATGTTACAGAATCAAAAACACTGTTCTGCTCAGTTTCATCTCGGTTCCTAACAACTTTTGAATGGACTGGATCAAATTCGTTAAAACGATCTGGGCAAGAGCTCGATATCAGCAAGGTGGAGAAGCCTGATTCAGTCTTTATTTGCACTGTGAAAAATGAAGTGAGCCAAAAGAGCACCAGCTTCACTCTGAAGGACTGCCCCGAAGGTAAACCACCACATGAGAATGTCATTCTACCAGTTATAATTATCATAGCTTGTGTTGTTATTATCGTGGGGAGTGCAGCtgccatttatttcatttaccgAAGAAGAAACAAGGGTAAGAAAGGGGAAGATCTAAACCATGCTGTCAGAAACAATTATGATCTAGAGGACAATGCAGAACAGGACACAAATGAAGATAGAGATGAGTTTGAAaatgatgaagaaacagaaatgaTGAGTGGTAATGAATACAGGGAAGAGGCAAACCAGGCTCTCAGAAGCAATCATGTGTCAGAGGACAGTGCAGAAGAGGATTTAAAGAAAGATAAAGAAGAAACCGAAatgatgcattattttaaatgtaGTGAGGATGTTGCAGAGAACTATGAAGAACAGGACATAAATCAAGAtgaagagtgaaaaaaaaaaaaaaaaaaaaaaaaaaaaacgataaattTAGTACTAGCAAAGTTGTAAGCAggcttgtatttaaaaaaaaaaaaaaaaaaaaaattatatttaggcTGGAAAAAATATGCATGACTTGTACAAAAGGATACCaccagctatttaaaaaaaaaccccaaggAATCTTAATTTTACTTTTCCCTGTGGGAAACTACTTGCATACTAAATTGTATTTCTTGTAAACATATTGAATATGTGTTCTAGGCCAAGATCTTCAGTTATGAAGAAAATAAGCAGGAAATCACAGCCCAAGACCTCACTGGACCCACACAAGACAGTCCTAACGAGTAACAAGTTAACTGAGCAGCAGACTCAGACatagcactttacaataaggttcattaaagaattaacttaaa

Function

GO:

id name namespace
GO:0005515 protein binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249338.1 True 1644 mRNA 0.38 8 5386472 5391186
XM_043249339.1 False 1512 mRNA 0.38 7 5386472 5391186

Neighbor

gene id symbol gene type direction distance location
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 203 5377251 ~ 5386269 (+)
cd58 NA coding upstream 9686 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 238301 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 248322 5128137 ~ 5138150 (+)
en1a LOC107670337,LOC107720935 coding upstream 278082 5105850 ~ 5108390 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 132374 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 237936 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 425659 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 592703 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 611589 6002775 ~ 6004352 (+)
G67970 NA non-coding upstream 45183 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 72912 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 89467 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 284808 5101359 ~ 5101664 (+)
G67882 NA non-coding upstream 302171 5084043 ~ 5084301 (+)
G68013 NA non-coding downstream 76355 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 355669 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 375153 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 404908 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 442954 5834140 ~ 5914281 (+)
ndufb3 ndufb3,LOC107752587,LOC107549774,LOC107549916,LOC107689503,LOC107720946 other upstream 244320 5140145 ~ 5142152 (+)
LOC122351471 NA other upstream 357833 5025563 ~ 5028639 (+)
c9h2orf76 zgc:101851,cunh2orf76,LOC107670315,LOC107747242,LOC107560816,LOC107752580,LOC107549781,LOC107689495 other upstream 368134 5015470 ~ 5018338 (+)
rbm45 rbm45,LOC107716918,LOC107752596 other upstream 669239 4709053 ~ 4717233 (+)
G67717 LOC107716922,LOC107657385,LOC107725823,LOC107671308 other upstream 823870 4523286 ~ 4562602 (+)
trnar-ccu_4 NA other downstream 14043 5405229 ~ 5405301 (+)
trnar-ccu_5 NA other downstream 14717 5405903 ~ 5405975 (+)
trnar-ccu_6 NA other downstream 16290 5407476 ~ 5407548 (+)
trnar-ccu_7 NA other downstream 17063 5408249 ~ 5408321 (+)
trnar-ccu_8 NA other downstream 17798 5408984 ~ 5409056 (+)

Expression


Co-expression Network