c9h3orf38 (LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751)


Basic Information

Item Value
gene id c9h3orf38
gene name LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5523560 ~ 5527595 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249342.1
CTGTGGTGCGTCTCGACAACGGAAGCGACCGCTTGTTTCACTTTCTCATGTCTTAGGTTCACAGTGGAAGTGTGTGGGATGTGTGCAGCCTGACATAAGCTGTGTAACTATGTCAAAGTTGTCAACGAAAGAGCAAAGTGGCTGTCGAAAACTGTTACGGTTGTTACCCCTGGACGACTTGTTCGCCCTTAAAGATACAGTAACGAATCGACTGATCGCCGTAGAGAGCACGCAAGAGGCCATCGAGGCCATCATAACTTACTCGCAAGATGCCGAGGAGCTCCTCAAGAGAAAGAAGGTGCACCGGgatgttatttttaagtatCTTGCCCATGAAGGAGTTGCCATGCCCCCTAATAGTGAGAAACAACAGCTGATCAGGAGAACCACTGAGCACTGGTCATCTGGTGAGATCTGGAAGCGTGAGAAGAACGCAGTGGTTTCAGAAGAGGTCGGAGATGGTCTGTCAGACCTTCCTGCTTTGGGAAAACAGTTTTGCCAGTGGTTCTTTACCCTACTGAACTCTCAAAACCCCACTCAGGGCCATCCGGCTCAAGACTGGGGTCCTCAGCACTTCTGGCAGGACGTGAGGCTTCGGCTTGTCTTGTGTTCTGGAGAGCGGCGCGTCGATGGGTTCGACGGAGCAGAGCTGGTCAGCCAGCGGCTCCATGCTTTCGCAGGACAAGAGAACCTGTTGTTCTGCCCGAACTTGGAGGGTCAGGGCTTGAAGTGCATATCTTCAGCTCATGGGCTGGTGTTGGTGGCCATAGCCGGGACCATCCACCGGGACAGTGCCTGCCTTGGGATTTTCGAGATGGTCTTTGGCCTCATTCGCTCACCGATGGACAATAACCGCTGGAAAATAAAGTTTGTGAATATGAAAGTGGAAGCTCAAAGTGCCGTGACAGACAGACGGTTGCCGGTCATTACCTACGACTCTACAGAGCTGCTGAGCCTTTGTGACTGAGAGTCAGAGATGAACTCTGAACACGGGTGATTCTGCCAAAGAAACTTTATCGCGGGATAGACATTCATCTGTACAAGGATCTTAGTTTGTATTTTGTTGACTTGAAGGAGATTTCCAGTCAGTTTAACCCCTAGCAAATATTTCAGTGAAATGTTTATTATCACTtgctattcttttaaatagaaaatctgAGTGAATGTTTATTGataattagtcattttagttcttatgtgaaatacacaaaacctcatttctattttaaggTGGCAGttctgcctttgtttttttaaagtcatcTTCACAAATGAGAGAAAAATTGAATTCATCGTTAGCTCTATAATATTTAGCAGTTTGCCTTAAAATAGGCCTACCTAaaatcttttttcctttctggtTATTTATATTCCTCTTCAATAATACTTGGAAACTTGAATcattttcacagtaaaaaaaaaaatctgtgaacaTCTCTCTGCCCTTATGgacttatttattattgttgttttatttaggcTTATTTTCTTCAAGCGCAGTGAGATCTTGGTGACACTTTACAGTGAGGTTCCTGTTGTTAACAACTACACTAAGTCAAATGAACCAGCAACGAAAAACGGCTTTTAATAACCTTAGTTAACGGTAATTTCATCTAGGCCtactaattattaaaatcaaaactcGTTTTTGTTATTAGAACCTGGGTTAACAACTAACAGtcgattttatttcaattaactaGTAATAACAAAACTGTAGCTAATGTAATTCTCCTTGCTTTAACCAGAAACCTCACTGTAAAGGGTTACCTAAGGATATTGGGAAGAGCCtctaagctttttttattagtagtatttattatttctgaattgAACTCGATTATTTCCACACGGCTTCTTTCGTCCAGCAGCGGGGCGTCAGACTCCCTCGTTCCCGCCATTACGGCGGAAGGAGCGTTTTTACGGTATTCACGCCTTACGGGAATAAAGTACCTTTCGTCGTCCTCGAGAGGCCAGAAGCGAGTCGTTTGACTCATCGGTCTCCGGAGGAGCACGGGAGGGCCGTGTGGTTTCAGCGGGGGATGTTATATGTGGGAAATTATTCTTGGCGCTCGCTTCAAAGGCCGACGCTTCGATAATATCTTTTCTCGAGCGCTTTTTTAATGCCGCGCAGTGCCATAGTTGTGGCAAAAGACGCCACCGCGAGCATTGATCTTTTCCCTGTTCGCCTCCCcgaaagaaaaataacaagcTCCTCGCCTTGCGTCTTTATAGCCGCGGCCTCTCTCTTTTTAATAAGTGGTTTGGCCGGGCTCGCGGTTATGACGACCAGGTTCAAAAATACGGGTCCCTGGCGTCTGCGGATCATCGCGCCTTCGCGTCGGCTTTAATGGCGACGTGTGTTTCTCATAAAGCCCATGTTAGCGTTTTGATTGTAAATCTCTCAGATATGTTTCGGAGGGGCGAACAATGAACTTCTTTAATTGgctggtctttttttttatttggttgctACTTTTGAATAGctgctttaaatgttataaaatagcACGTGCGTCTTTGACGCGTCCCCTTGTTTTTGCCTGGCTTTTGCTGCACTGAAACCAGTTTTATCCTAAACCATCAGGTTTTTTAATTGCTGTGACATTTCGCACAGTCTATAGTCTTGCTGAACTTTGTTGGCCTGTAATAagcatttgtcaaaaaaaataataaataaaaatcaatgattTGTCCACACGG

Function

NR:

description
PREDICTED: uncharacterized protein C3orf38 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249342.1 True 2703 mRNA 0.44 3 5523560 5527595

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 132374 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 137291 5377251 ~ 5386269 (+)
cd58 NA coding upstream 146774 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 375389 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 385410 5128137 ~ 5138150 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 101527 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 289250 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 456294 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 475180 6002775 ~ 6004352 (+)
LOC122351516 LOC107720938,LOC107752607,LOC107689504,LOC107549895,LOC107549742 coding downstream 477757 6005352 ~ 6030322 (+)
G67979 NA non-coding upstream 131181 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 182271 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 210000 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 226555 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 421896 5101359 ~ 5101664 (+)
G68056 NA non-coding downstream 219260 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 238744 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 268499 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 306545 5834140 ~ 5914281 (+)
G68101 LOC107670329,LOC107549899,LOC107730347,LOC107730410 non-coding downstream 362753 5890348 ~ 5892207 (+)
trnam-cau_112 NA other upstream 66031 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 66297 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 66717 5456772 ~ 5456843 (+)
trnar-ccu_64 NA other upstream 66985 5456503 ~ 5456575 (+)
trnar-ccu_63 NA other upstream 68118 5455370 ~ 5455442 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other downstream 356332 5883927 ~ 5885753 (+)
LOC122351907 LOC107670338,LOC107721263 other downstream 435289 5962884 ~ 5973123 (+)
si:ch211-167j6.3 NA other downstream 2813700 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 2903516 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 2933149 8460744 ~ 8506143 (+)

Expression


Co-expression Network