LOC122351337


Basic Information

Item Value
gene id LOC122351337
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12303714 ~ 12321820 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251738.1
GCTTTTGTGCATTCTGCCACAATAATGCACAATAATGTCTTCATTTCCATCCTTTTCACATCAAATGTTGATATGCAATTCATTTTGTCATTCGATTAATTACTTGTAAtggaaatataaatgataatatatctTATCTAAATGTCAAATAAGCCTGACTGCATGCAAATAGGGACATGCAACACTCTCAAGTGTCTCCTCTCTATCCAGATCTAGCAAACGATCTTACTgtggaaaaagtaaattgtacattttcagCCTGGGAGACAGAAGAAGGAATGCATTTCCCATGATTCAACATGAAACTAAGTAGAAACATCTCACACTCAACAGGCCGCTGCATCTAGGCTAGTCAATGAACTGGAAGGGAATTGGACATGGTATCTGCAGGATATTGGCAGCGGGCAGGGCCCCCCATGATTGCAGCTGAAAATGAACGACGCTGGGGACTGTCAAGCTAATGCCAAGTTTGATGAAGgaagcCAAAGCTTCTCTTCTCCAAAGTGTAAAGAAAACCCACACGACTGACAATACATCTCAGAGATGACCGAACACTACACATCGTTTCATGCCTCTTCCGTGTCTAGCATATTCAAAAAGGAAAGTTCAGGAACTTGTTGTGTTTGGCCTTTGCTCTCCATCCATCCCCTGTTCAAAATCAAACCGGCGTTCTGGTTGTGACCTGTTCTCTACTCTCCACTGTCGACTCTGTTAACATTAGCCAAACTAATGAGGCAGCGCTCCTTATCTGCCTCCCTCCTTTCTTGACATGAGCGTCCTGCACACAGTTCTCTCGCAGTCATCGCTCCTCTTTGCGTCAGCTCCCGCAAGTCGGGGAGTCGAACCCCTCCGGCCCTCGCTCTTCGTGGGAACAACATGCCCCCCCCCCACCTCCCCAATGGACCTTAGGCCTTGTCATCTTTAAACCTTCAAACAACACCCGAGTCACCCTCCCCCTTCCCACGGTTAAAATAAATTGTCCTTAGTGTAGAGGCGGCTGTCTGAAGCTTGCAAGTTAGGCCTTCCTGTCTTCGGGATTTTGGAAGCCCTCCCCTAGAGAGTAAGAAAGACTTTGTGAGAAAGATGAGAGAAAAGAGGAACGGGAAAAGAGAGCAAATGAGAAGAAGGTGTTGTAATTCCTGCCCACTCTTGAATCAGGACAGCGCCCACACACTTTTTCTCAAGCCCCCACGTGCACCGATGGCTGGGGTGATATAGCACGGgacagggtgtgtgtgtgtgtgtgtgtgctgtaatgACGGTGAGGTGGCGTTTAATGGCTGGCCAAAGTATCCTCGTGGGCGACTGCCGTTCCCATGCCCTGCTGCATTCCTCCCTCAGATCCCAGACGCGTTCTTTTGctactatttatttttccttcccCCTACGTGGAGGCCAGGATGTACAACGAGTGCATTACCAGTGACCTGAGTGGGAGGGGAAACAGTGGAGCCCTCCTGAACACAAatggacacacactcacacacacacacacatttaaatgctgCCATTAGTCCGGCCCCCAAGGGGTTATGCTCTCCTTTTAACACAGCGGTGACACTGCATGTACTGCGCTCTGGGTAGTTCTGGAGCAGATTGACCTATCTTTAGGTCTGGGTGATTATCTTTTCCCCATTTTCTGAAGTATTGATGAAATTATGCATCAAATGTTCAATGAAAGGTTGTTTCTTTGACTTTGTTGGTGATAACAATAGgcaaaaaatgtatatcatCAATAGAATTAATCCAATTATACTGCTGTTGAAGATATGACGATGTTTAACAATGCACAAGGAACAAGGAAAATCTCAAAGAatgattcttttaaattatataatcataGCCATATCATAGATCATAGATTCTGAGACTGACCTGCTTGAGCTGCACAAGCTGAAGGTTGTGAGTGAATGAACAATGGCAAGCTGAAATGCTTTTAGTCACAGAGAtcacaagaaacatttaaaaaatcttactgactgcAAACATGTTGAACCGTAGTGTATATTATTGAGTATCTAtctacaaaaaatatgtaaatgtaatatgtatatgtaaatattccTCTGAAGGCTAAGCAGAAAGTCCtgtcttcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251738.1 True 2097 lncRNA 0.44 3 12303714 12321820

Neighbor

gene id symbol gene type direction distance location
zeb2a zeb2a,LOC107711399,LOC107675348,LOC107563183 coding downstream 58926 12196754 ~ 12244788 (-)
arglu1a arglu1a,LOC107555859,LOC107673121,LOC107711396,LOC107577473,LOC107675355,LOC106586866 coding downstream 293777 12004004 ~ 12009937 (-)
efnb2a efnb2a,efnb2,LOC107555860,LOC107563180,LOC107675360,LOC105018709 coding downstream 303022 11982968 ~ 12000692 (-)
LOC122352021 hs6st3b,LOC107555209,LOC107733651,LOC107663930,LOC107600438,LOC107720131,LOC107655503 coding downstream 839300 11454069 ~ 11464414 (-)
gtpbp8 si:rp71-84d19.3,LOC107663822,LOC107567641,LOC107738531,LOC107733632,LOC107598183 coding downstream 899418 11400551 ~ 11404296 (-)
itm2bb itm2bb,itm2b,LOC107673124,LOC107709423,LOC107601060 coding upstream 123732 12445552 ~ 12452338 (-)
slc39a10 slc39a10,LOC107673130,LOC107709428,LOC107724029,LOC107675357 coding upstream 297456 12619276 ~ 12640868 (-)
LOC122352069 hacd2,LOC107660639,LOC107741899,LOC107661144 coding upstream 401581 12723401 ~ 12729104 (-)
LOC122351488 pikfyve,LOC107731754,LOC107569979 coding upstream 492333 12814153 ~ 12815138 (-)
ftcdnl1 zgc:153901,LOC107555842,LOC107728290,LOC107670712 coding upstream 792683 13114503 ~ 13118222 (-)
G69607 NA non-coding downstream 23517 12279793 ~ 12280197 (-)
LOC122351183 NA non-coding downstream 33567 12268112 ~ 12270147 (-)
G69596 NA non-coding downstream 147275 12085714 ~ 12156439 (-)
LOC122351998 NA non-coding downstream 349480 11790781 ~ 11954234 (-)
G69467 NA non-coding downstream 937895 11358950 ~ 11365819 (-)
G69639 NA non-coding upstream 70493 12392313 ~ 12393474 (-)
G69640 NA non-coding upstream 72277 12394097 ~ 12394329 (-)
G69641 NA non-coding upstream 72951 12394771 ~ 12395000 (-)
G69642 NA non-coding upstream 74246 12396066 ~ 12396514 (-)
G69643 LOC106586327,LOC106582410 non-coding upstream 82575 12404395 ~ 12404721 (-)
gtdc1 gtdc1,LOC107709416,LOC107555857,LOC107563182,LOC107675364,LOC107673117 other downstream 108753 12091131 ~ 12194961 (-)
LOC122351308 si:rp71-84d19.3,gtpbp8,LOC107663822,LOC107567641,LOC107738531,LOC107733632,LOC107598183 other downstream 803219 11496947 ~ 11500495 (-)
LOC122351858 slc10a2,LOC107663831,LOC107567642,LOC107675341,LOC107738529 other downstream 810594 11396666 ~ 11493120 (-)
mrasa LOC107551943,LOC107663912,LOC107733654,LOC107600440,LOC107738526 other downstream 1617087 10680158 ~ 10686627 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other downstream 1784257 10515272 ~ 10519457 (-)
G69650 NA other upstream 100609 12422429 ~ 12423446 (-)
lrch1 lrch1,LOC107709425,LOC107601076,LOC107673127,LOC107724026 other upstream 196464 12518284 ~ 12582425 (-)
LOC122351186 adcy5,LOC107555914,LOC107660638,LOC107596066,LOC107661140,LOC106586396,LOC107745452,LOC107668560,LOC107695824,LOC107716189,LOC107568450,LOC108433131 other upstream 386156 12707976 ~ 12720690 (-)
LOC122352189 NA other upstream 416224 12738044 ~ 12738171 (-)
G69757 NA other upstream 663304 12985124 ~ 12985978 (-)

Expression


Co-expression Network