G681


Basic Information

Item Value
gene id G681
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2740227 ~ 2742428 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1043
TCAAGAACACATCAAGGTTGATAGTGAAAcctttattaatacacaaaatgcCAAAACATGAACTTAGCGCTTGCCACCAACACGAGGAGCGCTGACCTTCATGGGCTTGGCGATTTTCTGTTTGGCTGCGGCTTTGACAGGGgcctaaaaacaataaaacacgtTACTCAATAtacaatttacaaaattaaacaatttacaTTTGCTTTGCAATAATCTGTAGGGCTGTAAATGACACTGAGCATCCATTGTTAAGGGTACTAGGTGTAGACACAGTCCTTCTACTCTGTGCCACCTTATGACACAGAAATGACAGAATCAGTCACACTGCAACGCCTTCAAGGGGCAAGggtgaaaaaaaccaaaaaacaaaaaggatgaACAGAGGagttctaaataaaaaatcaccCATGATTCACCCAACCTCTAGTCTTCTCTCCTTTCAGACAAATCACCATAAAAGTGTCCTAGttcttccaagctttataaaTGGAAGTGAATGTTTACATTCGGGATGAATAAAGGCTGTGTGAATGAACTGATGCCTTCCTTTATGCAAGAAAAActtgcacatttaaaatttatataaatccTAACCTCTAGTTAACTCTTGTATCAGAGTGAGGGGAGATCTCCGGGAGATGGAGGAGTTGGAAGAGTTAGGACacttaaaaacgtaaaaaaataaatgagttatACAAACCTAAGATGGCTTAAGGAGTGGAATCATgggacaatttttatttttgggtgaacaatccctttTAAACCATCTCTTACCTTGGTGCTCTGAACAGGTTGTTTCTTAGTTGCCTGCTTTGCTTTCTTGGCCTCCTTAGCAGCCCTGACACATCagACCTGATGGCCTGCTCTCTCTGAGCTTTACGCACTTCTGGCTTCTGGTTCCTCTTGGCCAGGATCTCAGCCAGAGAAGCACCGGTGATGGCACGCTGGAACTTCACAGCACGACGGGAGCGCTTCTTACTGACCTCTTCCTAAATCAGCAAACATACATCATGATTTAAGCTTCATTTCAGTCACTTGAAACATCAGCAGAAAATCAGCTCTCTAGTCatttttaacatgctttaaGGCAGCATCATTTACACAAGGTAGGGTCTGTCAGTGACTATTCTGAGGGGTTTGAGAGGTGAGAGTTACTCAGACTCACAGACTGGCCCTTCTTGTGCTTGCGGCGGTACAGAACGGTCCAGTTGATCTGTCTGGGGTTCCTCTTGGACAGGAAAGCAGACTCACACTTAGCATTCAGGAACTGGAAAACCTGCAGAGAGAGGATTGACAGCACATTCGCTCAGTTCCTACAGTCAAAGATCATATCAGACTATAACGCTTTCA

Function

GO: NA

KEGG:

id description
ko00520 Amino sugar and nucleotide sugar metabolism
ko03022 Basal transcription factors

RNA

RNA id representative length rna type GC content exon number start site end site
TU1043 True 1356 lncRNA 0.42 2 2740227 2742428

Neighbor

gene id symbol gene type direction distance location
cep97 NA coding downstream 638 2732846 ~ 2739589 (-)
nfkbiz LOC107751657,LOC107575617 coding downstream 7869 2726297 ~ 2732358 (-)
eed eed,LOC107751659,LOC107662672 coding downstream 16307 2720655 ~ 2723920 (-)
hikeshi hikeshi,zgc:110091,LOC106574699 coding downstream 20084 2717987 ~ 2720143 (-)
LOC122342272 LOC107751049 coding downstream 22383 2710717 ~ 2717844 (-)
LOC122353624 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 coding upstream 952737 3695165 ~ 3701245 (-)
ndfip2 ndfip2,LOC107676059,LOC107549434,LOC107750462,LOC107674006,LOC108411896 coding upstream 1789361 4531789 ~ 4546466 (-)
mnx2b mnx2b,LOC107750883,LOC107674001,LOC107556279,LOC107676047 coding upstream 1827406 4569834 ~ 4574420 (-)
fn1b fn1b,LOC107749885,LOC107556289,LOC107674002,LOC107750053,LOC107676051,LOC107549419 coding upstream 1854652 4597080 ~ 4618627 (-)
nrp2a nrp2a,nrp2,LOC107556288,LOC107749808,LOC107750056,LOC107673990,LOC107676043 coding upstream 1931261 4673689 ~ 4739460 (-)
G666 NA non-coding downstream 85395 2652717 ~ 2654832 (-)
G652 creg1,LOC107694464,LOC107751059,LOC107551109,LOC107739160,LOC107654633 non-coding downstream 175817 2562191 ~ 2564410 (-)
G653 creg1,LOC107751059,LOC107739160,LOC107654633,LOC107551109,LOC107694464 non-coding downstream 178261 2561355 ~ 2561966 (-)
G638 NA non-coding downstream 181363 2556243 ~ 2558864 (-)
LOC122351916 NA non-coding downstream 187966 2548924 ~ 2552261 (-)
LOC122351434 NA non-coding upstream 78760 2821188 ~ 2833731 (-)
G692 NA non-coding upstream 324383 3066811 ~ 3070069 (-)
G695 NA non-coding upstream 369842 3112270 ~ 3120797 (-)
G720 NA non-coding upstream 543528 3285956 ~ 3286209 (-)
G730 NA non-coding upstream 599134 3341562 ~ 3341953 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other downstream 50763 2688765 ~ 2689464 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other downstream 1135243 1592069 ~ 1604984 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 1508580 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 1991863 738137 ~ 748364 (-)
G67 NA other downstream 2304102 435808 ~ 436125 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 394080 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 1265412 4007840 ~ 4014287 (-)
G820 NA other upstream 1555882 4298310 ~ 4299193 (-)
mdh1b mdh1b other upstream 2213691 4956119 ~ 4960210 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other upstream 3101716 5844144 ~ 5853249 (-)

Expression


Co-expression Network