G727


Basic Information

Item Value
gene id G727
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 3334658 ~ 3340876 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1095
ATCAATATAGTGCTGTTTCATTTCCTTTCTCCAAGCTTTTCAAGCAAGAGGCTCTGCGGCACAGGAACAACAGTGATTAACGCTTCAGATCAACAGCCTAtccaacaaaacacaagattaTTTGCAGTAACTCCTCAGTTCTGCTGAGGGAGTGTTGGAGCGAACAATTCTCTTATCAGTGTCTGAAGGAGTGTGTGGATCTGCTAACTCGCACTCAAATCTCACGGTGTGTGAAAGACTTCATCAGACTCTTGTTTCAGGCTGAAATGGAATTGGCCTCCAAATTTCTCTCGCAGTGTCTCTGTCAGAGTTGATCATCCCTACATCGTCATCATCCTGTCTCTAGACATTTTCCGGATGACAGATTGCCTGTGAACCAACTGTAAACCATACGAACTCCACGATCAAACGGACTGCGCCAAAAGTGCTTCAAAAACTCTAAAGGAGAAACCAATGAGATTAGTCTTTCTCAGGAGAAAAATCTGGAGACTGCGAGATGCTGTCTAGGACAAACAGACGAGAAGAGTGATTTTTCCTTCCCACAGGCCGGATCCAGCGCTCACCTTTGAAATCGAGCCGTAATAGCTCTTTCAGATGTATCGCACCTAGCCTCTCTTGATAAACGCATAGATAGCGAGCGAGAGAGCGAGCGCGCGCGGTCGATAATGCAGTGAGCGCGTGGGCACCGTCCATTAAATAGCAGTTAATTACCCTGCACTGGAGATGAAAGGCTCATTTGTGAAACGGTCTCCTTCTCGCATTGATGAAATAGCTCTTCAAGTTCACACGCATGCTCTCTCGCGCAAACAAGTGCGCACGTTCCACACGTGCGGCATCCTAACGACGCCGCTTCAATCACAGGTGAAATTTTGCACGATCGTGACGCGTCCCTAAAGGAGAAAAACGGCGGATGTTTATATATAGAACGGTTTCCAGGGGTGAATTTCCAACGTGTGAATAATTCATGAGCCTTCATTACTGTTATCGACCGTTTCCTGTGTCCTCTCGCGCGGCCAAACCTAACAGATAATGTCTTCCTCTGATAGAGGGGTGATTGATATAAGTGCAGGCTTGCTTCCGAACAGGACAGTTTTCCCCTTCGACAAGGTTTCCTGCTCTTCCCACTTCTTTGttttctccacacacacacgcaccctCAAATTCACTCTGCTCCATTGCATCCCAAGCAGGCGTATTAGTAATCCATCAATGCTATTTCCAGTCCGTGGTCTCGCTGGCTGGCAGGGAGGAAAAAGGATTGGAGGAGAGACCTTGGACGCAGACAGTCCTTCGGCTTGCCATCGTGGCAAAATAATCACACAAAGGTGTCTGTGTGTCCCTAGCCCGGACTTCTGGAAAAAGGGGGATGTGAGCGGAAGAGATAAAGAAGGTAAACAAAACCGGTGACATACGCACTCGGTCCTGGGAGGCTCTGCCACATAATATAGCCGTGTCATGGGCTAGCGTGTGCCGTGGAAGTCTGGATAGGGGTTGAAGTACGTAGTCGGGTGGGTGgatgatgtttgtttgtttgttttttggaccGTGGCACGGCGCGTGGGTGCCAAACAGGCAGCGCATTGTAGCTCAACTGGACTTGGAAGTACTGGGactgaaagaaaagagagaaagagagacgggTTACGTTCAGAATAGCATACTAGCAAACGCTATTTCTGGAGTATGCGGTATATATAACGGTGTCCAAATTCCCTGATTTCATTTTGTACGTAAACCTTGCCAATCATTTCCAAAATGACGAATCGCCTAGAAATAGCATCAGCTGGAATTTTTAAGAAAATCCAAAAAATTTAAAGACACTTCTTAAAAATTCTGGAAAGTTTCTCCCCTTTGCGACCCTATAGATAACTAAGATGATGACTTAAGTATAATGAGGTCACAGTCACCGGTATTGTTACTGAtaactagaaaaaaaacttttttgcaaaaaaataatataataataaaataaataaaaatattaatacgaTATATATGTTAGATAAacacataattaaaacattgtgaCCTTTCTGTACGTATATTTCTCATGTCTTTGAGGCAAGTATTCACTGAAATTCATGTTGTTTCGCTTACGTCTCTGTGAAGACCCAGACGGCAGAGAACACGCAGAGcacattgttttgttattatggctatacacaaataaagtttcaaactatacatttttcttatctGTATGATCAAaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1095 True 2210 TUCP 0.46 2 3334658 3340876

Neighbor

gene id symbol gene type direction distance location
LOC122350229 gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC108414264,LOC100710496 coding upstream 213838 2941770 ~ 3120820 (+)
LOC122328837 gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC103365236 coding upstream 552474 2758083 ~ 2782184 (+)
rpl24 rpl24,LOC107575619,LOC107551103,LOC107751658,LOC107662676,LOC107662117 coding upstream 592247 2739677 ~ 2742411 (+)
LOC122353699 NA coding upstream 592446 2742079 ~ 2742212 (+)
tmem39a tmem39a,LOC107662110,LOC107570077,LOC107551106,LOC107751086 coding upstream 634434 2691742 ~ 2700224 (+)
slitrk6 slitrk6,LOC107674010,LOC107558904,LOC107730399,LOC107574216,LOC107737039,LOC107698122 coding downstream 463723 3804599 ~ 3817996 (+)
LOC122352357 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 coding downstream 666899 4007775 ~ 4011370 (+)
LOC122342374 erbb4a,LOC107674013,LOC107725343,LOC107556266,LOC108440448,LOC107557316,LOC107707608 coding downstream 880407 4221283 ~ 4232503 (+)
spry2 spry2,LOC107549433,LOC107750630,LOC107674014,LOC107676062,LOC107750049,LOC107556294 coding downstream 1154318 4495194 ~ 4499239 (+)
tuba8l2 tuba8l2,LOC107750365,LOC107556293,LOC103042625,LOC108411703,LOC107549435 coding downstream 1207576 4548452 ~ 4554686 (+)
G719 NA non-coding upstream 48456 3285949 ~ 3286202 (+)
G546 NA non-coding upstream 603938 2726300 ~ 2730720 (+)
G538 NA non-coding upstream 613735 2703522 ~ 2720923 (+)
G527 NA non-coding upstream 707254 2626045 ~ 2627404 (+)
G486 NA non-coding upstream 728581 2603191 ~ 2606077 (+)
G771 NA non-coding downstream 379388 3720264 ~ 3720539 (+)
LOC122341420 NA non-coding downstream 679221 4020097 ~ 4024338 (+)
LOC122346127 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 non-coding downstream 868533 4209409 ~ 4218600 (+)
LOC122346159 LOC107557315,LOC107705456,LOC107725343,LOC107707608,LOC107674013,LOC107667809,LOC107556266 non-coding downstream 878366 4219242 ~ 4221288 (+)
G815 NA non-coding downstream 953177 4294053 ~ 4299198 (+)
G482 dusp27 other upstream 738356 2594931 ~ 2596302 (+)
setdb2 LOC107570068 other upstream 776131 2493572 ~ 2558527 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other upstream 807414 2524525 ~ 2527244 (+)
pcid2 pcid2 other upstream 816273 2511572 ~ 2518385 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 845555 2483640 ~ 2489103 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other downstream 295831 3636707 ~ 3699093 (+)
G824 NA other downstream 1015822 4356698 ~ 4357260 (+)
G826 NA other downstream 1017131 4358007 ~ 4358296 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 1597305 4938181 ~ 4944841 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other downstream 1626310 4967186 ~ 4977263 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G404484 NA non-coding CI01000299 null 1197441 ~ 1198241 (-)