G749 (LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062)


Basic Information

Item Value
gene id G749
gene name LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 3636707 ~ 3699093 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1118
tttttttttttttttttttttttttttttttttttttttttttTATAAGAACCGACATCATATTTATTGAtgacataaacatattttggtCAATATAGTGCAATAAGTGCAAAGCAATCAAAACAATGGAAACGATAAGGGAAAGAGAATTGCGAATGCTTGTATAAAAATAGgtgttacattaaaatatcaGTATTACACAACATAATTATTacttcaattattatttatgaattttgatataacatattaaaaatacatattaagaATGAATacacatattcatttttaatatataatatttcttctAACGTTAGCTGGGAAGGCCCTGTGGCCTTCCATCTTCCAAAAAAGTGCAGACAGCATACAAAGACACTTTTCCTTTGAAATTGTTAAATGATGCAAAGTCTCTCTTCGACATTGGGGTGTGCCACTGCTGAAAAAAAGCCACTTGTACAATGCAAGCTACAGTAAGTGATCGGAAACTACAAACAAAATGTTCGTACAGAGAATGGGACATGACACACATAATATTGATGAGCattgaaaaaatgttgaaaatacatGGCAAAGAGTATACCAATAAATACAGTACTTACTTACAGACTAAAGCAGAGAAATTGTCCTGCTCGATTGGATGCGCTGCTGTATAGTGTTTCTGTCagaaagttgtgttttttttttgttttttgttttttttcttttgttcttgtttGCGAAACCCCTCCCCGACCTCTTTAAATTCACAATATTTGTATGATTATATTCCTGAAAATGTATTTGGGTGAGATTAACCTGTACACTTAGATTTATGAGTATTCAATCAtccacttaaaaaaatagatttttgcaTCGCCAGTTTTATATCACAACTCGTGCTTTCATCCAAGTTCCGCGAgctctatttatttgttttcattcttaGATATTTCTGTAATGCCATGTGGTTCTGAAATTAAAGTAACATAGTTCGGCACACCCCACTTAAggatttggacttttttttttctctttacgTTGATGTATGTTGTGCCAAGGCACCCTCCAGTTTGAGTCAGTACAAGGGGAAAAATGCATCTACTGCATTTATAGATAGCCCAACATTTAAAACTGGCTCTGTGTTGTCTGTTTCTCAAGAACTTCGAGGTAGTCCGGCTCTATTTGAAGTTTTGCCTTTAGTTCCAAATAGTCGTTTCTATTGGGCTCCACAAAGACAGTACTTGGCGCTGTGCCATATAGCATAGTCTCTCGTATTCCTTCTGGATGTAAGAACTGGCGCCTGACGTCGAAGTTTGGTTGGTATGTGTACGGGACGGGGCCAGTGTACTTATATTCAAACCTGCTGCCAGCAGTCGATGGGGATTTATCCGGCTCCAGGATTCCTCGGAAAAAGTGTTCTGCATCCTGGACAGGGGACGGCTGCTCACGAGGCTCGATGGTGCTCACTGTGTAATTCGGGCTCCTCAAGGTGACCTCCTGGTCCTCGTCAGCATTACTCCTGTAGGTGACCTTGAGTTCGTGTAGATCAGGGTAATCCTCCACAGCATTCCCTTCCCGGGACCTGTAGATTGGGTTTTTGCACATGTGACCTAACGGATGGGGAATGTACTCATAGACATGACCCGCTGGGGCCTTGACCTTGGGAACGGAGCGATTGCTATAGAGATTGTACTGCAGGTTGAAGGAGCTCACATCAGAGTTGTTTGTGCTGGTACGGTCGCTCTGAGACTTTTTACGCCTCTTCATCACCACCACAAACAGGCCGGCTGCCACAAACACCGACATAATGAAAACAAGGAGGAGGCTGAGAATGAGGACAGACAAAGGAACGTTACTGGAATGGGTGTTAAACCTCTGGGGTGTCTCCGTGGTGGTGATCCTGTCTGCAGAAGGCTCCTCAGAAGGAACCACGGTGGAGACGATGACATCGGAGTAATCTGGACATAATTGCTCAGAGGGGACAACCCGCATATCCTGGCCCGCGAGCCGCTTGGGAGTCACGCATTTGACATCATTGACCACTGTTCCTGTGTTTAGCTGCTCCAGCCAGATCTTCATGCCGACCACATCGCAGGAGCAGTCCCAAGGGTTCTCAAATAGGTCAATCTGGACCAGTGCTTTCAGCTGGTCCAGAACTCCGCTGACAGGCAGGTTTTGAAAGTGGTTGCTGCGAAGGTTGAGTCGGGAGAGAGACAGACTAGAGAAGATGCCTCCTggcaatgtttttaaaagattgttATTGAGGAAAAGTAACTGAAGGTTGGGCACAAAGCGGAAGGTGCCACCTACAATCTCTCGAATcttattatattctaaatacAAGTACTGCAGACTTTTTAACCCAAAGAACATATCTGCTGTGAGTCTGTCAATCAAATTGCCATTCAAGTACAGCCTACGTAGGTTAATTAAATCCCCAAAGGCTCTGTCGTGTATGAGTGCTATCCGATTGTTTCCCAGGTGCAATAAATCCAGTCCCTCAGCCTCCACAAAGTCAGATCTACGAACGACAGGGATGTAGTTCCCTGTGAGATACATCTTTTTAGGATTGTATGGCTTGGGCTTCAGATCTGATATGTTTTCAATCTTCCTCTCCTGGCAGTTGACATTTAGCCCCAGGTCGGAGATCTGTAGATTGCATGTACATGTGGTGGGGCAGTCCAAAGGCACGGGAGATTTGGTCTGAAAAGCAATGATGGGCCCATAGTTGTAGGGGTTGGCTGGGATTCGAGAAGTAGGCTTGGACTTGGTTTTGCCGGGTTGCCGTGTGCCCTTGGTCGGCCTGGACGAGGATCGCAGGACGGCCGAAGATGTGGCTGATGCCGTCACGGCCGCCGGTGTGGTCTGGAAATAGCCGCTGGTGCTGAGTGGGGGTGGAGGCCGCATCTCGTACTCTGATATGGCCCTTCTGGGACACAGTTCCTGCTTTGAGACCTCGTCCAGATCCCTGCCATGGAGCCTGAAAGGAGTCTCACATACCACCTCCCCCACCAGAGCTGTGTAGGCGATGCTTTCCAGCCAAGCCTTAAGCGCAATGAGCTCGCAGGAACAATTCCACGGATTCTCCTCAAGCTGTAATTCCACTACTTTGTCCATATGCTCCAAAAGGCCGATGTAAGGGAACATTTTTAAGCGGTTGCCCCTAAGATCCAGGTGCGTCAAGGGCACATTCCGGAAAATGTTTGTGGGCAAAGAGGACAACAAGTTGTCATTGAGAATAAGCACAGTCAGTTGCTGAAGCCTGCTCAGAGCATTAGGTTCAATAGTGCTAATGAAATTATAGTCTATCTGAAGGTATTCTAGGCTCTCGAGTCCGACGAAAGTGTCATCCCTTAGCATGTCTATTTTGTTATTGTTCAAATGTAATCTCTTTAATCCTTGGAGCCCGTTGAAAGCCCCGGTCTCCACCTCAGATATGTCATTATTACCTAAATGCAAAATAGTAACTCCAGTATAGTTGATGAAGTCATTGACAGATAGTCTTTTCAGCAAATTACCTGTCAGCAAAAGATGGTACATAGAAAACTGAACTGGGCTTATTTCCGACAGCCGCACAATGCCCCTGTTCTCACAACTGACCGTCAGAATGCCTTCCTTCTCCTCGCAAGTGCACAGATTCCTACAGATCTCCCCATAATTGTCATACATCTCAACCAGACTCAGAGATGTGGCAACCAGCAATATTATTTTCAGTATCCAGATATGCATTTTCTTGTGCAGGAATGGCCCAGCTCACGGTAGTGCAGTTGCAGTTTGAGGTGTCATCTAGAAAAGGAAAAAACGTGATGAATGTCTGTTACATGAACATGCAATGTCTACATGTGAAAACTACATTAAACGGCGGACAATGCCATAATGTTACAGGAATATTTTAATGACAGATTTGCAGGATCCTTCCCATTATTGTAATGCAAACTCCTAATGCCTAACAGCCTAATGCAAAAGGAGATTCTGATGCGAATAACCAATGGGCTCTGT

Function

NR:

description
PREDICTED: SLIT and NTRK-like protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1118 True 3978 TUCP 0.48 2 3636707 3699093

Neighbor

gene id symbol gene type direction distance location
LOC122350229 gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC108414264,LOC100710496 coding upstream 515887 2941770 ~ 3120820 (+)
LOC122328837 gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC103365236 coding upstream 854523 2758083 ~ 2782184 (+)
rpl24 rpl24,LOC107575619,LOC107551103,LOC107751658,LOC107662676,LOC107662117 coding upstream 894296 2739677 ~ 2742411 (+)
LOC122353699 NA coding upstream 894495 2742079 ~ 2742212 (+)
tmem39a tmem39a,LOC107662110,LOC107570077,LOC107551106,LOC107751086 coding upstream 936483 2691742 ~ 2700224 (+)
slitrk6 slitrk6,LOC107674010,LOC107558904,LOC107730399,LOC107574216,LOC107737039,LOC107698122 coding downstream 105506 3804599 ~ 3817996 (+)
LOC122352357 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 coding downstream 308682 4007775 ~ 4011370 (+)
LOC122342374 erbb4a,LOC107674013,LOC107725343,LOC107556266,LOC108440448,LOC107557316,LOC107707608 coding downstream 522190 4221283 ~ 4232503 (+)
spry2 spry2,LOC107549433,LOC107750630,LOC107674014,LOC107676062,LOC107750049,LOC107556294 coding downstream 796101 4495194 ~ 4499239 (+)
tuba8l2 tuba8l2,LOC107750365,LOC107556293,LOC103042625,LOC108411703,LOC107549435 coding downstream 849359 4548452 ~ 4554686 (+)
G719 NA non-coding upstream 350505 3285949 ~ 3286202 (+)
G546 NA non-coding upstream 905987 2726300 ~ 2730720 (+)
G538 NA non-coding upstream 915784 2703522 ~ 2720923 (+)
G527 NA non-coding upstream 1009303 2626045 ~ 2627404 (+)
G486 NA non-coding upstream 1030630 2603191 ~ 2606077 (+)
G771 NA non-coding downstream 21171 3720264 ~ 3720539 (+)
LOC122341420 NA non-coding downstream 321004 4020097 ~ 4024338 (+)
LOC122346127 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 non-coding downstream 510316 4209409 ~ 4218600 (+)
LOC122346159 LOC107557315,LOC107705456,LOC107725343,LOC107707608,LOC107674013,LOC107667809,LOC107556266 non-coding downstream 520149 4219242 ~ 4221288 (+)
G815 NA non-coding downstream 594960 4294053 ~ 4299198 (+)
G727 NA other upstream 295831 3334658 ~ 3340876 (+)
G482 dusp27 other upstream 1040405 2594931 ~ 2596302 (+)
setdb2 LOC107570068 other upstream 1078180 2493572 ~ 2558527 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other upstream 1109463 2524525 ~ 2527244 (+)
pcid2 pcid2 other upstream 1118322 2511572 ~ 2518385 (+)
G824 NA other downstream 657605 4356698 ~ 4357260 (+)
G826 NA other downstream 658914 4358007 ~ 4358296 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 1239088 4938181 ~ 4944841 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other downstream 1268093 4967186 ~ 4977263 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other downstream 1280032 4979125 ~ 5025914 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_01693958_01696561 SLITRK5 coding CI01000299 null 1692924 ~ 1697305 (-)