G1061


Basic Information

Item Value
gene id G1061
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5614387 ~ 5622881 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1540
CTAAAATGAGGATGATCTTTGAAGAAGGCCTTCTCTGTTTCTGTGGCCTCATTGAGAGTGACTTGATCTAAAATCTCTTTTTGTCCTCTGCACCTCACAATCATGTAACCTTTAGTAAGGTGAATGACCTCATTGTGCACAATGTCTACAACTGTCTCTTCGGTGCCCTTGTCCACCAGATCCGGCTTTGTTAAGATACCTGTAGATAGAATATGATGACAATATAGTCAGAATATGCATAGCAGCCTATAGGTTTACCTACTCTGATTTATGTACGCaccttatttttgtatttaggGTATCATTTGCATATAGATACCTGTGCATGtacaataaacaaacagtacATTGTGCTGCTCGATATTTCACATTCTAAAATAAGGTGAATAGAATTGCATGAAATGCAATCAGTAAAGCACACCTAATGTTCTTTCGCCTTCAGTGTCCTCCTCCTGAGCCATCTTTAACGCTTCTGTGGTTGCGATGTCAACATTGCATGGCACCACGACCAGGTTAATCGTTTCTTGCTTTGTAACGAACTTCCTGATCAGTCTCTtaatctagaaaaaaaacatttgtctgGTGAACATTCCATTCCCTATgtcaaaaaaccccaaaatgtCATAGAAAGTAAATATAAGGAGTTCACCTGATCCCCAATATTCTCCGGTTGCCCCTTGACAGCCACTCGTGCGATACCAGGGAGGTCAATGAGAGTGAGGTCAGGGACATTGGCAGAGGTGATCTGCAGACTGATGAGTTCATCACTAATACCAACACCTACTCCAGCCATCTCATCCTGAGCTGCAAGTTAGACCCAAACCTAAGTAGTGTACTATatacaatatgcatttttaagcattctgtACCTTCACGGATCTTTTTCTCCACTTCTGCTGGATCATGAATATCTTCCTCTTTGTCCTGGTAGCTGATTCTCCCATGCCATTTGTCTACATCTTTACTTCTTATCATCTTGAGCTCAAGAGGACACCTTGTAACAATTCCTACACAAAACATGAAAGGTGGCACTTTGTAATTCACCGTGCTGTTCTTCAAAATGGCGTACAAATGTCAGTTCCCCGGGTCAGGGCCACTGCTGACCAAATAGTTGCTCTAGGCAGAATTGTATTGTtgtggaagtaaaaaaaacaaatagaattttaatgaaatataaaagtacaattttttttattttaattaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1540 True 1205 lncRNA 0.53 2 5614387 5622881

Neighbor

gene id symbol gene type direction distance location
LOC122347193 pcnp,LOC107564735,LOC107590694,LOC107702552 coding upstream 3648 5608329 ~ 5610739 (+)
mylz3 mylz3,LOC107725378,LOC107564772,LOC107701775,LOC107702554,LOC107705457 coding upstream 6972 5603707 ~ 5607415 (+)
lancl1 lancl1,LOC107564761,LOC107702553,LOC107590692 coding upstream 14332 5593642 ~ 5600055 (+)
si:ch73-383l1.1 erbb4a,erbb4,LOC107705456,LOC108440448,LOC107674013,LOC107702505,LOC107707608,LOC107667809 coding upstream 51514 5440065 ~ 5562873 (+)
erbb4a erbb4a,erbb4,LOC107674013,LOC107707608,LOC107725343,LOC107667809,LOC107557316,LOC108440448,LOC101079286 coding upstream 319947 5157979 ~ 5294440 (+)
en1b eng1b,en1,LOC107705463,LOC107702516 coding downstream 45516 5668397 ~ 5672318 (+)
LOC122347080 NA coding downstream 156816 5779697 ~ 5782861 (+)
slc5a10 slc5a10 coding downstream 214232 5837113 ~ 5860158 (+)
LOC122342392 LOC107725347,LOC107565259,LOC107701771 coding downstream 253825 5876706 ~ 5879991 (+)
LOC122342401 LOC107725347,LOC107701771,LOC107565259 coding downstream 257814 5880695 ~ 5888652 (+)
LOC122344626 NA non-coding upstream 206089 5404612 ~ 5408298 (+)
G1036 NA non-coding upstream 457406 5156722 ~ 5156981 (+)
LOC122346173 NA non-coding upstream 475533 5127490 ~ 5138854 (+)
G1016 NA non-coding upstream 513065 5038720 ~ 5101322 (+)
G948 NA non-coding upstream 636473 4977422 ~ 4977914 (+)
G1086 NA non-coding downstream 51491 5674372 ~ 5674683 (+)
G1091 NA non-coding downstream 115006 5737887 ~ 5789576 (+)
G1154 si:dkeyp-9d4.3,LOC107725391,LOC107701782,LOC107564683,LOC107722956,LOC107590702 non-coding downstream 174512 5797393 ~ 5798851 (+)
G1161 NA non-coding downstream 209428 5832309 ~ 5861878 (+)
G1162 NA non-coding downstream 210214 5833095 ~ 5841013 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other upstream 588473 4979125 ~ 5025914 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other upstream 637124 4967186 ~ 4977263 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other upstream 669546 4938181 ~ 4944841 (+)
G826 NA other upstream 1256091 4358007 ~ 4358296 (+)
G824 NA other upstream 1257127 4356698 ~ 4357260 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other downstream 256579 5879460 ~ 5881134 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other downstream 434523 6057404 ~ 6087655 (+)
G1318 NA other downstream 662977 6285858 ~ 6287198 (+)
G1414 NA other downstream 910621 6533502 ~ 6536957 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other downstream 1088754 6711635 ~ 6845548 (+)

Expression


Co-expression Network