G1064 (mxa,mx1,LOC107702551)


Basic Information

Item Value
gene id G1064
gene name mxa,mx1,LOC107702551
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5593214 ~ 5626276 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1543
tttttttttttttttttttttttTTTATAATATGATGGATATCTTTAATTGGGAAAATGCACCCCATGTTGTTCATTAAGAGTTAAATTccaaaactgaaataacatatttgcatatatgcatatttgtgCTCCATACTATATATTTCATACTTTCCTTTCCttaaccctttttttaaattatttttaataggtAACCAAGAGGCTGCGTGCCTTCATCAGACGTTTCTGGCGACTCAGTAAGCTCTCCCGCTTTTGGCCGATGTCAAAGTCTTCTTTAAGCAGGTGGTCTACATCTTCTCTATCATGCAGCAACTGCAACATGTTCCTCTGCAGCTCCGAAGCTGCTTCCTGGAGCAGCAGATAGCGGATCACCATCGGGATCTGGTCAGCTAGACGCTTGCTTGCAATCTGGTGAGGTAGATAACACTGCGTCTcagatatacatttatatttgagtAAGCTCCGATGGATCTGAAAGCTTTAGTTAGCACACTTACCATGTAATAGGACTCAAGGTGCAACCTCATCTCACGCAAAGTGGCATCATGACCTGTGGAAATTACTATACCCACAAATTgatcttcctcctcttcctgctTGTCCTTTGCATGTTGCAGACTCTGGCTGTATGTGCCATCTTGACTGTAAACAATGAGCTCCATCTTGAATTGGGTTCTCAGCATAGATTCTGCTTGGGATTCTTTATCCTGCTTGATGGCTTCAATCTTAGtctaa

Function

symbol description
mxa Predicted to enable GTPase activity and microtubule binding activity. Acts upstream of or within response to arsenic-containing substance; response to bacterium; and response to virus. Predicted to be active in several cellular components, including cytoplasm; microtubule; and nucleus. Is expressed in several structures, including digestive system; gill; heart; immune system; and muscle. Human ortholog(s) of this gene implicated in alopecia areata; avian influenza; liver disease; and prostate cancer. Orthologous to human MX1 (MX dynamin like GTPase 1) and MX2 (MX dynamin like GTPase 2).
mx1 Enables identical protein binding activity. Involved in antiviral innate immune response; interleukin-27-mediated signaling pathway; and negative regulation of viral genome replication. Located in cytosol; nuclear membrane; and perinuclear region of cytoplasm. Implicated in alopecia areata; avian influenza; liver disease; and prostate cancer. Biomarker of Human papillomavirus infectious disease.

NR:

description
Myxovirus (influenza) resistance A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1543 True 737 lncRNA 0.50 3 5593214 5626276

Neighbor

gene id symbol gene type direction distance location
si:ch73-383l1.1 erbb4a,erbb4,LOC107705456,LOC108440448,LOC107674013,LOC107702505,LOC107707608,LOC107667809 coding upstream 30341 5440065 ~ 5562873 (+)
erbb4a erbb4a,erbb4,LOC107674013,LOC107707608,LOC107725343,LOC107667809,LOC107557316,LOC108440448,LOC101079286 coding upstream 298774 5157979 ~ 5294440 (+)
ube2f ube2f,LOC107725407,LOC107556276,LOC107674019,LOC107707607,LOC107566887 coding upstream 436858 5149028 ~ 5156356 (+)
si:ch211-93g23.2 si:ch211-93g23.2,LOC107725372,LOC107674017,LOC107556277 coding upstream 444324 5145908 ~ 5148890 (+)
fastkd2 LOC107673994 coding upstream 626294 4960324 ~ 4966920 (+)
en1b eng1b,en1,LOC107705463,LOC107702516 coding downstream 42121 5668397 ~ 5672318 (+)
LOC122347080 NA coding downstream 153421 5779697 ~ 5782861 (+)
slc5a10 slc5a10 coding downstream 210837 5837113 ~ 5860158 (+)
LOC122342392 LOC107725347,LOC107565259,LOC107701771 coding downstream 250430 5876706 ~ 5879991 (+)
LOC122342401 LOC107725347,LOC107701771,LOC107565259 coding downstream 254419 5880695 ~ 5888652 (+)
LOC122344626 NA non-coding upstream 184916 5404612 ~ 5408298 (+)
G1036 NA non-coding upstream 436233 5156722 ~ 5156981 (+)
LOC122346173 NA non-coding upstream 454360 5127490 ~ 5138854 (+)
G1016 NA non-coding upstream 491892 5038720 ~ 5101322 (+)
G948 NA non-coding upstream 615300 4977422 ~ 4977914 (+)
G1086 NA non-coding downstream 48096 5674372 ~ 5674683 (+)
G1091 NA non-coding downstream 111611 5737887 ~ 5789576 (+)
G1154 si:dkeyp-9d4.3,LOC107725391,LOC107701782,LOC107564683,LOC107722956,LOC107590702 non-coding downstream 171117 5797393 ~ 5798851 (+)
G1161 NA non-coding downstream 206033 5832309 ~ 5861878 (+)
G1162 NA non-coding downstream 206819 5833095 ~ 5841013 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other upstream 567300 4979125 ~ 5025914 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other upstream 615951 4967186 ~ 4977263 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other upstream 648373 4938181 ~ 4944841 (+)
G826 NA other upstream 1234918 4358007 ~ 4358296 (+)
G824 NA other upstream 1235954 4356698 ~ 4357260 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other downstream 253184 5879460 ~ 5881134 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other downstream 431128 6057404 ~ 6087655 (+)
G1318 NA other downstream 659582 6285858 ~ 6287198 (+)
G1414 NA other downstream 907226 6533502 ~ 6536957 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other downstream 1085359 6711635 ~ 6845548 (+)

Expression


Co-expression Network