G1195 (LOC107751037)


Basic Information

Item Value
gene id G1195
gene name LOC107751037
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6075698 ~ 6077286 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1737
AATCcgaattcagtttttttaatgactctgctaacaattacaattaaaccAGAAGTCACAATAACAACGAGGAAAACATTTGATAAAGTTTCTGCTGTGGGAGTTTTATAGAGTTATCAAACAACTCAAATGAACCAACATTATAAAGTGTTGTCAGATCTTTCTCTAATTCCCCCACAGTTTTGTCTTTGGGAGTAATATTCTTGTTCTCTCCAATAAACCCTCTTGAGATCTGACATTTGTTATTGTTGTCTAAGCAGCAGTATGCGGTCCAGAAGTGACTAGGCACttttactctattttttatttgacttgcACCTGGTACCACCCCTGTCACAATGTAGACCGAATATTTTTTTGATAGACATTGCTCGGACAGTTCTTCCGCAATGCTTTTTTCTAGTTTCTTCCACTGTCCTCGGTTAAAAGAGCGGTCTTGTGGAGCAGCATTGGTGAGAGTGAAGGTGGCATCAGCACAGCTCTGTGACAGTGCCTGGAAGACTGGTGCCAGATGACCTTTGTCGTATCCAGAGTTATCATAGTCACCATTAAGAGCTTGATGGTCTCCAAGTTGTTGTATTTTAACATCTTTCTCACATTTCATGGATGATGATTCTTTTTTGTCGTCAAGTGTTTGTTCTTTTGCAGTCCTTTAGTCCTTCAAACTTGTAGGCAGAGTACACAGGGATCTTGTTGTCAGTGTCATAGAATGTggcataataataaacattatttagagCTTGGCAGATCTGCCTGTATTGTGGTTCAGGAAATATTGTTGGTGATCTCCTGTTTGCAAAGAATTGGCCGCATTCATTCTGAAAATCCTGCACAACTTTGGCCGATGCACCGAAGAGAAGCGACAGCATCAGCGCACGAAGAAGAAACATCACGATGAAGATCATGGATCAAGTTCTCTG

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: endonuclease domain-containing 1 protein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737 True 920 lncRNA 0.41 3 6075698 6077286

Neighbor

gene id symbol gene type direction distance location
slc29a4b si:ch211-160d14.6,slc29a4,LOC107692733,LOC107590706,LOC107565581,LOC107575408,LOC107722931,LOC107702536,LOC108439098 coding upstream 5062 6062142 ~ 6070636 (+)
smcr8b LOC107725400,LOC107564620,LOC107692669,LOC107702539,LOC107722967 coding upstream 35854 6035257 ~ 6039844 (+)
mief2 mief2,LOC107725398,LOC107564637,LOC107692671,LOC107722970,LOC107590704,LOC107702540 coding upstream 41900 6028082 ~ 6033798 (+)
alkbh5 alkbh5,LOC107725396,LOC107692672,LOC107702542,LOC107722963,LOC107590703 coding upstream 48576 6021733 ~ 6027122 (+)
myo15ab LOC107725350,LOC107692700,LOC107565240,LOC108441473 coding upstream 55743 5984438 ~ 6019955 (+)
fscn1b fscn1,fscn1b,LOC107692665,LOC107564588,LOC107722932,LOC107590764,LOC107702511 coding downstream 17063 6094349 ~ 6099830 (+)
zgc:77849 zgc:77849,LOC107722949,LOC103038624,LOC107692663,LOC107564565,LOC108439082,LOC107702534,LOC107590708 coding downstream 30575 6107861 ~ 6113525 (+)
tlr2 tlr2,LOC107590711,LOC107722930 coding downstream 149112 6226398 ~ 6231182 (+)
prkcba prkcb,LOC107722959,LOC107702530 coding downstream 155750 6233036 ~ 6260748 (+)
cacng3a cacng3,LOC107590766 coding downstream 185136 6262422 ~ 6267501 (+)
G1161 NA non-coding upstream 213820 5832309 ~ 5861878 (+)
G1162 NA non-coding upstream 234685 5833095 ~ 5841013 (+)
G1154 si:dkeyp-9d4.3,LOC107725391,LOC107701782,LOC107564683,LOC107722956,LOC107590702 non-coding upstream 276847 5797393 ~ 5798851 (+)
G1091 NA non-coding upstream 286122 5737887 ~ 5789576 (+)
G1086 NA non-coding upstream 401015 5674372 ~ 5674683 (+)
G1199 NA non-coding downstream 12223 6089509 ~ 6089855 (+)
G1200 NA non-coding downstream 12887 6090173 ~ 6090453 (+)
G1201 NA non-coding downstream 13559 6090845 ~ 6091157 (+)
G1206 NA non-coding downstream 37678 6114964 ~ 6115281 (+)
G1287 socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765 non-coding downstream 142638 6219924 ~ 6221396 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other upstream 194564 5879460 ~ 5881134 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other upstream 1049784 4979125 ~ 5025914 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other upstream 1098435 4967186 ~ 4977263 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other upstream 1130857 4938181 ~ 4944841 (+)
G826 NA other upstream 1717402 4358007 ~ 4358296 (+)
G1318 NA other downstream 208572 6285858 ~ 6287198 (+)
G1414 NA other downstream 456216 6533502 ~ 6536957 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other downstream 634349 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other downstream 694200 6771486 ~ 6782141 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other downstream 769214 6846500 ~ 6860270 (+)

Expression


Co-expression Network