G1270 (zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708)


Basic Information

Item Value
gene id G1270
gene name zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6111463 ~ 6113523 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1845
AAAAGCTTGATTTCTTTAATGCAAGAATCATTATTGTACATTAACAATTCAATGGTCTctgcacagctttttttttacaatatgtacCACAAGTCTATGTCAGCACCTACAGgtatttacattacataatgTTACATTGGAGACAAAGGTGCTGGGGAAAAGAGCGACAGAAGAGGatgagcgaaaaaaaaagatggatgtTCAGGAAGAATGAAGGGAAATTACTGAAGAAAAACGAGAGTGATTGAGAGATGTGCATGACAGCGGACGTATGGCTATCACAGCACTTGTGCCTGCTGCTCGAGCAGAATTAagagaaagcaaaaaagaaaaagaaaaatcatgaaTAACATtgtcaataatattaaaataaaacttttgttgcTTTTCAAAGCCGCAGCGTGGTAACTGAGAGCTGGGGCAGTGACAGGTGCTGGAGGAAGAGGCAGgtaccacacacactcacaaacacactctaaCACAAAACTCATCAGTcgttcactcacacacatcaaGTACTTGTACACACACGCAATCAAACAGACATTGCTCATTATGTTGCGAACATGCACAcgaaaatgttttcttgttcCTGCGTTCGATCGCATCTCAGTTCAGCCATAACgcaacctcacacacacacacacatacacacaatcaACTCACGCAGCAATATAGTGAATGAGGGTTGTGTGTTTGTCGACAGGATCCTATGGAAGGGCACTTAGGCCTCTGCACTGAACACCGTCTCCCACCGATCACCTCAACTGGGCTCTGTAGACCAATCAGAGAATGTGCTGGGCTGTGGTGAGCACTGTTATTGGCTGCTTTTATTTCCTGGTCTGAATAAAGATGGGAGGATGACTGAGGAGTGGCATTTTATTCACGTATTACGCAGTTGTTGTCGTCGTCGTCTTTTTCTTAAGAGCTCAGATCATCCTATTGCGTTTGTGAGTGGGCGAGTCTGTTATGACATCATTGCACTGGGCGGAGCTTCGTTTCCGAGTTCCGTTGTCGAGGTGGAGTGCCATCTCCTCGGCAATGAAAGTGTTGAGGTCCACGTCGTGGAGACCGTTTCGACGGCGACTGGGGGCGGAGCTGGCACTCAGGTGTGTGGGTGAACCTGGGGCTCCGGAGCGCATACTGATACTCGCCATGGCTCCGCTTAGACCTTCATGCAGAGCAATGGCCTCCCTGAAAGGCTGCAGGTCTGTTTCTACAGATGAACTTGTCTCCGAGGACGTGGGTCGGCTTGGCGACACCATTGCAAGTCTTGGCGGAGCCCTGGAGCTACGTGGCGGTGGGGCTTTACCACAGAGGAAGCTGATAAGATCCTCACGCCGAATAGTCCGCCTCCTTTTCTTCACCCATGCTAGGACATCTTTGTTTCGTCTCTGATGACCGATCTGAATACCCAACTCATAACTCCTCTGATGGGCATCAACACTCT
>TU1847
AAAAGCTTGATTTCTTTAATGCAAGAATCATTATTGTACATTAACAATTCAATGGTCTctgcacagctttttttttacaatatgtacCACAAGTCTATGTCAGCACCTACAGgtatttacattacataatgTTACATTGGAGACAAAGGTGCTGGGGAAAAGAGCGACAGAAGAGGatgagcgaaaaaaaaagatggatgtTCAGGAAGAATGAAGGGAAATTACTGAAGAAAAACGAGAGTGATTGAGAGATGTGCATGACAGCGGACGTATGGCTATCACAGCACTTGTGCCTGCTGCTCGAGCAGAATTAagagaaagcaaaaaagaaaaagaaaaatcatgaaTAACATtgtcaataatattaaaataaaacttttgttgcTTTTCAAAGCCGCAGCGTGGTAACTGAGAGCTGGGGCAGTGACAGGTGCTGGAGGAAGAGGCAGgtaccacacacactcacaaacacactctaaCACAAAACTCATCAGTcgttcactcacacacatcaaGTACTTGTACACACACGCAATCAAACAGACATTGCTCATTATGTTGCGAACATGCACAcgaaaatgttttcttgttcCTGCGTTCGATCGCATCTCAGTTCAGCCATAACgcaacctcacacacacacacacatacacacaatcaACTCACGCAGCAATATAGTGAATGAGGGTTGTGTGTTTGTCGACAGGATCCTATGGAAGGGCACTTAGGCCTCTGCACTGAACACCGTCTCCCACCGATCACCTCAACTGGGCTCTGTAGACCAATCAGAGAATGTGCTGGGCTGTGGTGAGCACTGTTATTGGCTGCTTTTATTTCCTGGTCTGAATAAAGATGGGAGGATGACTGAGGAGTGGCATTTTATTCACGTATTACGCAGTTGTTGTCGTCGTCGTCTTTTTCTTAAGAGCTCAGATCATCCTATTGCGTTTGTGAGTGGGCGAGTCTGTTATGACATCATTGCACTGGGCGGAGCTTCGTTTCCGAGTTCCGTTGTCGAGGTGGAGTGCCATCTCCTCGGCAATGAAAGTGTTGAGGTCCACGTCGTGGAGACCGTTTCGACGGCGACTGGGGGCGGAGCTGGCACTCAGGTGTGTGGGTGAACCTGGGGCTCCGGAGCGCATACTGATACTCGCCATGGCTCCGCTTAGACCTTCAACACACAGATGAACTTGTCTCCGAGGACGTGGGTCGGCTTGGCGACACCATTGCAAGTCTTGGCGGAGCCCTGGAGCTACGTGGCGGTGGGGCTTTACCACAGAGGAAGCTGATAAGATCCTCACGCCGAATAGTCCGCCTCCTTTTCTTCACCCATGCTAGGACATCTTTGTTTCGTCTCTGATGACCGATCTGAATACCCAACTCATAACTCCTCTGATGGGCATCAACACTCT

Function

symbol description
zgc:77849 Acts upstream of or within cellular response to xenobiotic stimulus. Orthologous to human C16orf72 (chromosome 16 open reading frame 72).

NR:

description
UPF0472 protein C16orf72 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1845 True 1450 TUCP 0.46 2 6111463 6113523
TU1847 False 1412 lncRNA 0.39 2 6111463 6113523

Neighbor

gene id symbol gene type direction distance location
abcg2b abcg2b,LOC107692667,LOC107725367,LOC107564610 coding downstream 4483 6099976 ~ 6106980 (-)
actb1 actb1,actb2,actbb,LOC103039558,LOC102799139,LOC103383494 coding downstream 23701 6084199 ~ 6087762 (-)
fbxl18 fbxl18 coding downstream 28285 6078416 ~ 6083178 (-)
LOC122347076 NA coding downstream 33190 6074411 ~ 6078273 (-)
LOC122347124 NA coding downstream 37521 6071930 ~ 6073942 (-)
grin2ab grin2ab,LOC107564541,LOC107692695,LOC107722958,LOC108439083,LOC107725390,LOC108258284 coding upstream 25100 6138623 ~ 6205146 (-)
ndufab1a ndufab1,LOC107725395,LOC107590767,LOC107702508,LOC107722929 coding upstream 163534 6277057 ~ 6280616 (-)
palb2 palb2 coding upstream 167650 6281173 ~ 6288577 (-)
ern2 ern2,LOC107702527,LOC107722925,LOC107590742 coding upstream 186393 6299916 ~ 6312773 (-)
LOC122342505 LOC107565181 coding upstream 216138 6329661 ~ 6330527 (-)
G1263 NA non-coding downstream 22060 6089023 ~ 6089403 (-)
G1257 NA non-coding downstream 43849 6066311 ~ 6067614 (-)
G1254 NA non-coding downstream 48278 6062356 ~ 6063185 (-)
G1248 LOC107725398,LOC107692671,LOC107722970,LOC107722977,LOC107590704,LOC107564637,LOC107702540 non-coding downstream 77464 6031896 ~ 6033999 (-)
G1246 NA non-coding downstream 90532 6020556 ~ 6020931 (-)
G1282 NA non-coding upstream 100118 6213641 ~ 6214547 (-)
G1288 NA non-coding upstream 104721 6218244 ~ 6218589 (-)
G1394 NA non-coding upstream 275897 6389420 ~ 6389637 (-)
G1398 NA non-coding upstream 299859 6413382 ~ 6413581 (-)
LOC122347249 NA non-coding upstream 374121 6487644 ~ 6490193 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other downstream 258214 5844144 ~ 5853249 (-)
mdh1b mdh1b other downstream 1151253 4956119 ~ 4960210 (-)
G820 NA other downstream 1812270 4298310 ~ 4299193 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other downstream 2097176 4007840 ~ 4014287 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other downstream 2826677 3136508 ~ 3284786 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other upstream 107081 6220604 ~ 6226114 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other upstream 154140 6267663 ~ 6274751 (-)
gng13a NA other upstream 213500 6327023 ~ 6328341 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other upstream 342521 6456044 ~ 6468254 (-)
LOC122342514 NA other upstream 419978 6533501 ~ 6544558 (-)

Expression


Co-expression Network