G1282


Basic Information

Item Value
gene id G1282
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6213641 ~ 6214547 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1861
CTTGATGTCCagatccaaaataaaaactatggaGTTATCAAtTAAGCGGTGACCCAAATCCAGATCAAGACATCAAGCGAAAAGAACCAGACCAATGCCATGTTCATGTCATCTACTGAAGCCAAATACCAAGACCACAAGATATCTGAGCTACAGAAGGCCCAGGACTTTGGGGAAAAACTGTCCCACTCAGAAATCCAAAGTAGGTTATAAAGTAACCAAGAAGCCTGAAGCACAGCCCTTCTG

Function

GO:

id name namespace
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
TU1861 True 246 lncRNA 0.41 3 6213641 6214547

Neighbor

gene id symbol gene type direction distance location
grin2ab grin2ab,LOC107564541,LOC107692695,LOC107722958,LOC108439083,LOC107725390,LOC108258284 coding downstream 8495 6138623 ~ 6205146 (-)
abcg2b abcg2b,LOC107692667,LOC107725367,LOC107564610 coding downstream 106661 6099976 ~ 6106980 (-)
actb1 actb1,actb2,actbb,LOC103039558,LOC102799139,LOC103383494 coding downstream 125879 6084199 ~ 6087762 (-)
fbxl18 fbxl18 coding downstream 130463 6078416 ~ 6083178 (-)
LOC122347076 NA coding downstream 135368 6074411 ~ 6078273 (-)
ndufab1a ndufab1,LOC107725395,LOC107590767,LOC107702508,LOC107722929 coding upstream 62510 6277057 ~ 6280616 (-)
palb2 palb2 coding upstream 66626 6281173 ~ 6288577 (-)
ern2 ern2,LOC107702527,LOC107722925,LOC107590742 coding upstream 85369 6299916 ~ 6312773 (-)
LOC122342505 LOC107565181 coding upstream 115114 6329661 ~ 6330527 (-)
zgc:136472 zgc:136472,LOC107692654,LOC107702524,LOC107572430,LOC107722945,LOC107590714 coding upstream 119390 6333937 ~ 6338319 (-)
G1263 NA non-coding downstream 124238 6089023 ~ 6089403 (-)
G1257 NA non-coding downstream 146027 6066311 ~ 6067614 (-)
G1254 NA non-coding downstream 150456 6062356 ~ 6063185 (-)
G1248 LOC107725398,LOC107692671,LOC107722970,LOC107722977,LOC107590704,LOC107564637,LOC107702540 non-coding downstream 179642 6031896 ~ 6033999 (-)
G1246 NA non-coding downstream 192710 6020556 ~ 6020931 (-)
G1288 NA non-coding upstream 3697 6218244 ~ 6218589 (-)
G1394 NA non-coding upstream 174873 6389420 ~ 6389637 (-)
G1398 NA non-coding upstream 198835 6413382 ~ 6413581 (-)
LOC122347249 NA non-coding upstream 273097 6487644 ~ 6490193 (-)
G1499 fgb,LOC107665922,LOC107692638,LOC107714148,LOC107564337 non-coding upstream 567866 6782413 ~ 6839409 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other downstream 100118 6111463 ~ 6113523 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other downstream 360392 5844144 ~ 5853249 (-)
mdh1b mdh1b other downstream 1253431 4956119 ~ 4960210 (-)
G820 NA other downstream 1914448 4298310 ~ 4299193 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other downstream 2199354 4007840 ~ 4014287 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other upstream 6057 6220604 ~ 6226114 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other upstream 53116 6267663 ~ 6274751 (-)
gng13a NA other upstream 112476 6327023 ~ 6328341 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other upstream 241497 6456044 ~ 6468254 (-)
LOC122342514 NA other upstream 318954 6533501 ~ 6544558 (-)

Expression


Co-expression Network