G5


Basic Information

Item Value
gene id G5
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 47787 ~ 48527 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU19
gatcaagatgtggtttcttaatgagaggtttaactacagccagtttaaaggttttgggaacataacctaatgacaatgatgaattaataatgttcaaaataggatctataacttctggaagcagatcttttaatagtttagatggaacagggtctaacatacatgttgctggtttagatgatttaacaagtttgtacaagtcttcttctcctataatagagaaagagtgtaatttttccttaggggatctaaagctcattatctgatgtgaaactgtagttgacggctgcatatttacaattttatctctgatggtatcaatcttagaagtaaagaaattcataaactcattgcagctatactcttggggcatattagcacctgttgatgctttattttttgttaatttagtcactgtactaaataaataccgggggttgtgtttgttttcttctaaaagggatgaaaaataatcagatcttgctatttttaatgcttttctgtatgacagcatactctcccgccaggcaatacgaaatacttctaatttggtttttctccacctgcgctccattttccgggctgctctctttagggtgcgtgtgttgtcattataccatggagtcagattgttttcttttatcttttttaagtgcaaaggagcaactgtatctaaagtgctagaaaaaagagagtgcatagtttcagttacatcatcaagtttttgcatcgtattggatg

Function

GO:

id name namespace
GO:0004520 endodeoxyribonuclease activity molecular_function
GO:0004536 deoxyribonuclease activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19 True 741 lncRNA 0.38 1 47787 48527

Neighbor

gene id symbol gene type direction distance location
prpf4bb prpf4bb,LOC107738454,LOC107749644,LOC107598186,LOC107670278,LOC107554722,LOC108442973 coding upstream 144684 193211 ~ 205559 (-)
gli3 LOC107749627,LOC107747788,LOC107554716,LOC107598194,LOC107694915,LOC107694564 coding upstream 162196 210723 ~ 361603 (-)
ccr9b ccr9b,LOC107598203,LOC107749654,LOC107675310,LOC107726711,LOC107703604 coding upstream 356155 404682 ~ 408086 (-)
lztfl1 lztfl1,LOC107701792,LOC107675311 coding upstream 374373 422900 ~ 433678 (-)
trnag-gcc NA coding upstream 390527 439054 ~ 439128 (-)
G6 LOC107683095,LOC107600734,LOC107716905 non-coding upstream 3640 52167 ~ 52588 (-)
G18 NA non-coding upstream 117570 166097 ~ 166327 (-)
G19 NA non-coding upstream 129149 177676 ~ 178201 (-)
G50 NA non-coding upstream 170052 218579 ~ 221074 (-)
G51 NA non-coding upstream 170402 218929 ~ 221328 (-)
G20 NA other upstream 137893 186420 ~ 187085 (-)
G67 NA other upstream 387281 435808 ~ 436125 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other upstream 689610 738137 ~ 748364 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other upstream 1027661 1076188 ~ 1231647 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other upstream 1543542 1592069 ~ 1604984 (-)

Expression


Co-expression Network