G6 (LOC107683095,LOC107600734,LOC107716905)


Basic Information

Item Value
gene id G6
gene name LOC107683095,LOC107600734,LOC107716905
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 52167 ~ 52588 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU20
gtcctgcagctgctggagtggttagactttcccagacgctacaccttgatcctggagcgtcccgttccttgccaagatctggacactttctgcaagcagaacggacgcctggaggagagtctggccaagaaagtgctgctgcagctggtcacggcgctgaaacactgcgagagccgcggagtcctgcaccgggacgtcaaaccggagaacctgctgatctccacagagtcacacgacatcaagctgctggacttcggctgtggagatctgctgaaagactcggcctacagacactttgcaggcactcttcagtacgcccctcctgagtggttttggcgg

Function

NR:

description
Nance-Horan syndrome protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20 True 339 lncRNA 0.49 2 52167 52588

Neighbor

gene id symbol gene type direction distance location
prpf4bb prpf4bb,LOC107738454,LOC107749644,LOC107598186,LOC107670278,LOC107554722,LOC108442973 coding upstream 140623 193211 ~ 205559 (-)
gli3 LOC107749627,LOC107747788,LOC107554716,LOC107598194,LOC107694915,LOC107694564 coding upstream 158135 210723 ~ 361603 (-)
ccr9b ccr9b,LOC107598203,LOC107749654,LOC107675310,LOC107726711,LOC107703604 coding upstream 352094 404682 ~ 408086 (-)
lztfl1 lztfl1,LOC107701792,LOC107675311 coding upstream 370312 422900 ~ 433678 (-)
trnag-gcc NA coding upstream 386466 439054 ~ 439128 (-)
G5 NA non-coding downstream 3640 47787 ~ 48527 (-)
G18 NA non-coding upstream 113509 166097 ~ 166327 (-)
G19 NA non-coding upstream 125088 177676 ~ 178201 (-)
G50 NA non-coding upstream 165991 218579 ~ 221074 (-)
G51 NA non-coding upstream 166341 218929 ~ 221328 (-)
G56 NA non-coding upstream 340711 393299 ~ 393852 (-)
G20 NA other upstream 133832 186420 ~ 187085 (-)
G67 NA other upstream 383220 435808 ~ 436125 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other upstream 685549 738137 ~ 748364 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other upstream 1023600 1076188 ~ 1231647 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other upstream 1539481 1592069 ~ 1604984 (-)

Expression


Co-expression Network