G1926


Basic Information

Item Value
gene id G1926
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8556040 ~ 8607795 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU2800
gtaattcaaattagtacaaaatcattttattacaaaatatataataaataaatacatagatatAAATACAACACGCAACACTTTTGTGAACAACATTCAACATTGAACAAACTGTTTTAAGCATAACCAAACACTGTTCCCATTGGTACAGTTTAATATGTCAGATGCGGCCATATCTTTCATATCTTCAGGCTCAACTTCACAGATGACCCAGCCATTCATAGGGTTTTGGCAAGGATCCTCTCAATGACCTTCTTAACCCAGGGTGCAGTAGGGTCCAGACAGATCTCTTTCCTGGATCCCTTCAGGGTTGCACTGTgttacaaataaagaaagaaaaaacattaagaacCCTATTTGATGTTAAGTTTGTACTCTGTAAGTGTTATAGCATTATGAGTGCGAAACTCACATGATCTCTGTGTCTTTACAGTGTGAGCTCGGAGGGAAGAGCTCCACACTTTCTATGTGTTTTCCGATGCGTCGACTCTCAGTCTCAATGCAGCGACACCGTGGATCTACACCCAGGCCTCTAAGGCTCATCCTTCACAAATGGTCAGGAATCCGAGGCATACGATAACAGAGACTAAAAAGATTTTGCAGTGCATTCTTCAAAAGAGAAACTTAGATTTACAATCGGAAACtaacaaaaagtaaaagtaaatatagaGTTTGGATGCTAGACGCTTGAGATGTTCAGATCGGTCGGTACTGTTAATTGTTATCTTTCATCTTCTGCTGTCACGGTGAGGAGAGCCGTTCCCGTTCAAGATTCCCGCGGATGCCGTTCAGCAATCAAGGCCAGGAGAGCCTCCACTGGTTCCGTCCAGCTCAGAAAGGGGTTCCCGATACACCAGTGCCAGCGCCTCGTGAACACCCTCCAGTGCCTGGTAGGCTCTATCCAGTGGCCGCTCCTCAAGAACGTCCTCAAGTGTTAAGCCCAGAGGAGATTAAAAACTTAGCTTCCGTCTGCCACACTGCTCACCCTCAGCCCACCATCTGTGTGTTGGATTCgtcacgggtctgccagtctccatcgttGTCTTTGCTGGAGAATCTCTTGACTCCTCATTGGCCATTTGACTTGTTGGCTCCACAgtggctcctagctccctcctctccactgtgGCCCGTCAGTTCACCAGCTCCGCAGTGATCTCTCATCCCTCCAGCTCCATATTGGTCTATTGTCTGACTTTGCCttgtccctccatccctccatcaTGGCTGTGGCCCGGGTCCTATCTGCCTTCTCCTTCTCCAAGTCCCTTCAATCTCCTCCCTCTATCTGAACCACCCTGAACTCCGTTAGTCATTCTTTTTCTGGGTGTCCAttctccaccagaacctcct
>TU2801
gtaattcaaattagtacaaaatcattttattacaaaatatataataaataaatacatagatatAAATACAACACGCAACACTTTTGTGAACAACATTCAACATTGAACAAACTGTTTTAAGCATAACCAAACACTGTTCCCATTGGTACAGTTTAATATGTCAGATGCGGCCATATCTTTCATATCTTCAGGCTCAACTTCACAGATGACCCAGCCATTCATAGGGTTTTGGCAAGGATCCTCTCAATGACCTTCTTAACCCAGGGTGCAGTAGGGTCCAGACAGATCTCTTTCCTGGATCCCTTCAGGGTTGCACTGTgttacaaataaagaaagaaaaaacattaagaacCCTATTTGATGTTAAGTTTGTACTCTGTAAGTGTTATAGCATTATGAGTGCGAAACTCACATGATCTCTGTGTCTTTACAGTGTGAGCTCGGAGGGAAGAGCTCCACACTTTCTATGTGTTTTCCGATGCGTCGACTCTCAGTCTCAATGCAGCGACACCGTGGATCTACACCCAGGCCTCTAAGGCTCATCCTTCACAAATGGTCAGGAATCCGAGGCATACGATAACAGAGACTAAAAAGATTTTGCAGTGCATTCTTCAAAAGAGAAACTTAGATTTACAATCGGAAACtaacaaaaagtaaaagtaaatatagaGTTTGGATGCTAGACGCTTGAGATGTTCAGATCGGTCGGTTCTCTTCTTTCCTATCTGCATCATCATGCCAGTCCACTGTAAACATCAGTCAGAGTATTGTCATTAATactcaacacacacaaaactaataaaacatcaGATTCCTTTTCATGTGCATTAAAGATGCTTGAGATATCAAGTAAATGTGTGAGTTGCTGTTAAAGGAattgttcacacaaaaattacaattctgtcatcatttactcaccctcatggaaaat

Function

GO:

id name namespace
GO:0005811 lipid droplet cellular_component

KEGG:

id description
ko04979 Cholesterol metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU2800 True 1353 TUCP 0.53 4 8603300 8607795
TU2801 False 931 lncRNA 0.53 4 8556040 8607795

Neighbor

gene id symbol gene type direction distance location
elf2b elf2b,LOC107692595,LOC107702304,LOC107742505,LOC107714223,LOC107562959 coding downstream 65985 8472819 ~ 8490055 (-)
pcdh18a LOC107751534,LOC107692598,LOC107564003,LOC107746447,LOC107557554 coding downstream 376464 8172337 ~ 8179576 (-)
sclt1 sclt1,LOC107692600,LOC107665924,LOC107683335 coding downstream 737641 7805692 ~ 7818399 (-)
cplx2l cplx2l,LOC107692605,LOC107723185,LOC107665962,LOC107758899,LOC108241424,LOC103366469,LOC107390991 coding downstream 785514 7762381 ~ 7770526 (-)
b4galt1 LOC107692709,LOC107565367,LOC107758898,LOC107665944,LOC107557953,LOC108277608 coding downstream 826300 7722102 ~ 7729740 (-)
pde5aa LOC107692592,LOC107563895 coding upstream 1293 8609088 ~ 8622357 (-)
wfs1a wfs1a,LOC107565338,LOC107692704,LOC107742510 coding upstream 26766 8634561 ~ 8642497 (-)
LOC122351261 NA coding upstream 66199 8673994 ~ 8676615 (-)
LOC122345778 dmd,LOC107692624 coding upstream 105835 8713630 ~ 8751572 (-)
LOC122351709 NA coding upstream 258660 8866455 ~ 8867812 (-)
LOC122351284 NA non-coding downstream 107416 8446548 ~ 8448624 (-)
G1868 NA non-coding downstream 388653 8138483 ~ 8167387 (-)
LOC122341751 NA non-coding downstream 478653 8075175 ~ 8077387 (-)
G1845 pcdh10a,LOC107751533,LOC107665923,LOC107557555 non-coding downstream 571737 7953213 ~ 7984303 (-)
G1809 LOC107723197,LOC107692608,LOC107564078 non-coding downstream 758594 7743495 ~ 7797446 (-)
G2010 NA non-coding upstream 23669 8631464 ~ 8634397 (-)
G2016 NA non-coding upstream 61618 8669413 ~ 8670804 (-)
G2033 NA non-coding upstream 88077 8695872 ~ 8697401 (-)
G2034 NA non-coding upstream 92634 8700429 ~ 9005360 (-)
G2038 NA non-coding upstream 100424 8708219 ~ 9014629 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other downstream 55828 8492144 ~ 8500212 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other downstream 1260211 7204004 ~ 7295829 (-)
G1642 NA other downstream 1386018 7125642 ~ 7170022 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other downstream 1421758 7071589 ~ 7134282 (-)
LOC122342514 NA other downstream 2011482 6533501 ~ 6544558 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other upstream 171417 8779212 ~ 8798355 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 1749386 10357181 ~ 10401686 (-)
LOC122347930 dnah6,LOC106610484 other upstream 2127175 10734970 ~ 10799609 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other upstream 2198774 10806569 ~ 10814075 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other upstream 2346080 10953875 ~ 10981366 (-)

Expression


Co-expression Network