G231


Basic Information

Item Value
gene id G231
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 973746 ~ 973969 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU328
CGAGGCTCCAGCGGATCGATGGCTGACCAATCAGTGGTTGATTTAATATGATGTGGTCAGCGAATCAATGTCTGCCctcaaaataattattgaaatgaaaCTGGCGTGTGTTCGCAGCAAAACAAACCTCCCTGGAGAAATACACGTcttggcttttttttaattaatgttaaaaatggcaAGATATTAAGGCAAGAGTCATCCAGAGCAACAGTGAAACCAAC

Function

NR:

description
Nance-Horan syndrome protein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328 True 224 lncRNA 0.38 1 973746 973969

Neighbor

gene id symbol gene type direction distance location
LOC122342059 ncam2,LOC107748174,LOC107756756,LOC107673712,LOC108426076,LOC107721821 coding downstream 147520 766226 ~ 826226 (-)
LOC122353666 NA coding downstream 345928 627700 ~ 627818 (-)
trnag-gcc NA coding downstream 534618 439054 ~ 439128 (-)
lztfl1 lztfl1,LOC107701792,LOC107675311 coding downstream 540068 422900 ~ 433678 (-)
ccr9b ccr9b,LOC107598203,LOC107749654,LOC107675310,LOC107726711,LOC107703604 coding downstream 565660 404682 ~ 408086 (-)
farp1 farp1,LOC107730395,LOC107677850,LOC107653673,LOC107560794,LOC107744955,LOC107559785 coding upstream 76777 1050746 ~ 1116435 (-)
kpnb3 kpnb3,ipo5,LOC107677849,LOC107653674 coding upstream 143872 1117841 ~ 1137065 (-)
LOC122353706 NA coding upstream 155530 1129499 ~ 1129637 (-)
rap2ab rap2ab,rap2a,LOC105911819,LOC106582448,LOC106512668,LOC101166017,LOC105933629,LOC103391592,LOC105907999 coding upstream 174703 1148672 ~ 1164935 (-)
slc5a3a slc5a3a,LOC107730390,LOC107677845,LOC107555245,LOC107559792,LOC107746980,LOC107653669 coding upstream 290802 1264771 ~ 1269925 (-)
G125 NA non-coding downstream 83159 890244 ~ 890587 (-)
G99 NA non-coding downstream 249710 723745 ~ 724036 (-)
G73 NA non-coding downstream 525106 448328 ~ 448640 (-)
G72 NA non-coding downstream 525864 447508 ~ 447882 (-)
G70 NA non-coding downstream 531537 441879 ~ 442209 (-)
LOC122347488 NA non-coding upstream 282220 1256189 ~ 1263203 (-)
G244 NA non-coding upstream 308869 1282838 ~ 1284809 (-)
G247 NA non-coding upstream 370329 1344298 ~ 1346789 (-)
G260 NA non-coding upstream 467119 1441088 ~ 1441512 (-)
G297 NA non-coding upstream 593069 1567038 ~ 1567532 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 225382 738137 ~ 748364 (-)
G67 NA other downstream 537621 435808 ~ 436125 (-)
G20 NA other downstream 786661 186420 ~ 187085 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other upstream 102219 1076188 ~ 1231647 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other upstream 618100 1592069 ~ 1604984 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other upstream 1714796 2688765 ~ 2689464 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 2162539 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 3033871 4007840 ~ 4014287 (-)

Expression


Co-expression Network