G297


Basic Information

Item Value
gene id G297
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1567038 ~ 1567532 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU436
TTCACTGTATTAAGAATTTGATAACCGgagcaatatttattatatgtcaAAAAGCAGAACTGTAGCgctgtagttttagtttttctttgagCTCTCCGGTGTCCGTGCAGCAGGCTGTGACTCACAGTGTATGGCGCTGCGGCTCGGGGAGATGGGTGTCGTGGGGTGAACCGCCGGGGTGGAGATGGGACCCAGGTAAGGGTAGGACTGCTCGTACGACCAGGACGGAGACGTCTGCATCTGCCGAGAGTCTGAAACCACACGGTCACATTCAATGCATGACATTTCACCGTCAAAACCAAGACGTACATACTACAAAATACAGAGATATTATCAATGGCtactgagaacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacactcacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU436 True 443 lncRNA 0.44 2 1567038 1567532

Neighbor

gene id symbol gene type direction distance location
urp2 LOC107698908 coding downstream 97937 1465437 ~ 1469101 (-)
rcan1b rcan1b,LOC107555267,LOC107698909,LOC107568778,LOC107653682,LOC107718018,LOC107709340 coding downstream 111967 1442791 ~ 1455071 (-)
LOC122350642 atp1a1a.4,LOC107717913,LOC107653679,LOC107555265,LOC108429865 coding downstream 154092 1404578 ~ 1412946 (-)
atp1a1a.1 atp1a1a.1,LOC107718011,LOC107555257,LOC107698904,LOC107653678,LOC107717912,LOC107568774 coding downstream 164214 1392929 ~ 1402824 (-)
LOC122350536 atp1a1a.2,atp1a1a.4,atp1a1a.3,LOC107698906,LOC107555259,LOC107717913,LOC107555265,LOC107653679 coding downstream 196051 1364542 ~ 1370987 (-)
wu:fa56d06 LOC107555251,LOC107751082 coding upstream 38344 1605876 ~ 1612082 (-)
n6amt1 n6amt1,LOC107563652,LOC107727005,LOC107698915,LOC107689945,LOC107751077 coding upstream 394782 1962314 ~ 1968862 (-)
LOC122342174 adamts5,LOC107751075,LOC107593743 coding upstream 584119 2151651 ~ 2155943 (-)
jam2a LOC107751072,LOC107593737 coding upstream 656557 2224089 ~ 2235491 (-)
mrpl39 mrpl39 coding upstream 671606 2239138 ~ 2244571 (-)
G260 NA non-coding downstream 125526 1441088 ~ 1441512 (-)
G247 NA non-coding downstream 220249 1344298 ~ 1346789 (-)
G244 NA non-coding downstream 282229 1282838 ~ 1284809 (-)
LOC122347488 NA non-coding downstream 303835 1256189 ~ 1263203 (-)
G231 NA non-coding downstream 593069 973746 ~ 973969 (-)
G303 LOC107698893,LOC107555241,LOC107751081,LOC107653672,LOC107571885 non-coding upstream 13211 1580743 ~ 1582087 (-)
G304 NA non-coding upstream 16359 1583891 ~ 1584684 (-)
G347 NA non-coding upstream 215663 1783195 ~ 1784512 (-)
G358 NA non-coding upstream 299108 1866640 ~ 1867365 (-)
G372 NA non-coding upstream 322444 1889976 ~ 1893190 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 335391 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 818674 738137 ~ 748364 (-)
G67 NA other downstream 1130913 435808 ~ 436125 (-)
G20 NA other downstream 1379953 186420 ~ 187085 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other upstream 24537 1592069 ~ 1604984 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other upstream 1121233 2688765 ~ 2689464 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 1568976 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 2440308 4007840 ~ 4014287 (-)
G820 NA other upstream 2730778 4298310 ~ 4299193 (-)

Expression


Co-expression Network