cyyr1 (cyyr1,LOC107751099,LOC107698919,LOC107593871)


Basic Information

Item Value
gene id cyyr1
gene name cyyr1,LOC107751099,LOC107698919,LOC107593871
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2185821 ~ 2192464 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU616
TCAGGGATGAAGCCCACGGAGCGGATTCGTGAAAACACGACTGAAGGGAGATCTAAATATAGACTTCAGGGACGCTGGCGAGAAGATGAGGCCGCAATTTGCCGCTATTGAAGAGGACGGTCGTGTCGTTCCTGAGATAACGTCCACGTTCGCGTCGTGACGGCGGAGGCGCATCCAGAAGGACCGGGCGACGATCCTGGGGGAGGGGATCGAGGCGAAGAAAAGAGAATAGCGCGAGGAAGAAGTTCAAGACAAAGAGGAAGGAGTCAAACGAGAAGTTGCGCCCGAGAGGCTGCTCGAGGAACACGTGGAGCGCCGCGGATAAACCAGCTGCTTCGTTTTAACGCTTGACAGGCAGAGGAACAGAACGAGACGACTTAAGACATGGCAGCATTAGCGAAGATGAAGTAACATGCGAAAGTCGGTGGGAAACGTACAGGGAGATCATGGAAAGTCGGAGGAGATGGACGCTCCTGCGGGACTCGCTGCTGCTCTGCTTCTTCGCCGgcCGTGGAGATGCTCAGTGTGACAGCTGTATGGAGTATTGCTGTGATGGGGTTCCTCCGTTCTGCTGCTCTTACTATGCGTATGTGGGAGATGTGCTCTCGGGGACGGCCATCTCTGGGATCGTGTTCGGGGTGGTGTTTCTGATGGGTGCCGTCGCGGCCGTCTTTCTGTgcatctgtatgtgtgtgaagaACGGCCGCGGGGCGAGAGTGGGCGTCTTCGGCTCGTCCTACATCAACACCGTGACTCAGGGTTAcccagGTCCTCCACCTCCGTACAGTTACGACTACGAGATGTACGCTCCGGATCTACGGCCTCCTCCGTACACTCCCACTCCACCCAGAGCCACAGGCTGCTCTCCACCTCCACCCTATCCGGGCTACAGCCGCAAGTGAGCCTCCCGGCGTGCGcaaaataatgcacaaatattaaaaacgatAATCCCTGCTCGACCTCTGCGGATGAAGCGGGGATTTCCAGTCACTggagcttatttttatttatggacATCTATGGAGGCGATGAACACTAATACACCTTATTAGGAGACCTGGACGGGCCTGAAAActacaaaatgtgtttaaacaGTACGTCTTCTTGTTGAAGATCAGTGTTATGTCTTTTAATCAAACGGTGATGCAGTGAAATGTATATTCTTCTACCCGAAACGTGTTTTTATCAACTGAGGAAATAATACGGTAAACATATTTATTCGTAGAAATCCGAAAGAGCAGGTTGCATTTGTAGCTGGCCACTGGCTAGGTGTAGTTCATGTCCAAACAGACAAATGTTAATGCAGTTCACGAGCGTTTTTACTTTTCATAATAAAACTGAAGGCTGC
>XM_043240894.1
TTGAGACGCTCTTGTTTACTCTTCGTGTCGAGCTCGGGTCAGGGATGAAGCCCACGGAGCGGATTCGTGAAAACACGACTGAAGGGAGATCTAAATATAGACTTCAGGGACGCTGGCGAGAAGATGAGGCCGCAATTTGCCGCTATTGAAGAGGACGGTCGTGTCGTTCCTGAGATAACGTCCACGTTCGCGTCGTGACGGCGGAGGCGCATCCAGAAGGACCGGGCGACGATCCTGGGGGAGGGGATCGAGGCGAAGAAAAGAGAATAGCGCGAGGAAGAAGTTCAAGACAAAGAGGAAGGAGTCAAACGAGAAGTTGCGCCCGAGAGGCTGCTCGAGGAACACGTGGAGCGCCGCGGATAAACCAGCTGCTTCGTTTTAACGCTTGACAGGCAGAGGAACAGAACGAGACGACTTAAGACATGGCAGCATTAGCGAAGATGAAGTAACATGCGAAAGTCGGTGGGAAACGTACAGGGAGATCATGGAAAGTCGGAGGAGATGGACGCTCCTGCGGGACTCGCTGCTGCTCTGCTTCTTCGCCGgcCGTGGAGATGCTCAGTGTGACAGCTGTATGGAGTATTGCTGTGATGGGGTTCCTCCGTTCTGCTGCTCTTACTATGCGTATGTGGGAGATGTGCTCTCGGGGACGGCCATCTCTGGGATCGTGTTCGGGGTGGTGTTTCTGATGGGTGCCGTCGCGGCCGTCTTTCTGTgcatctgtatgtgtgtgaagaACGGCCGCGGGGCGAGAGTGGGCGTCTTCGGCTCGTCCTACATCAACACCGTGACTCAGGGTTAcccagGTCCTCCACCTCCGTACAGTTACGACTACGAGATGTACGCTCCGGATCTACGGCCTCCTCCGTACACTCCCACTCCACCCAGAGCCACAGGCTGCTCTCCACCTCCACCCTATCCGGGCTACAGCCGCAAGTGAGCCTCCCGGCGTGCGcaaaataatgcacaaatattaaaaacgatAATCCCTGCT

Function

symbol description
cyyr1 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including female organism; head; lateral line system; male organism; and pectoral fin. Orthologous to human CYYR1 (cysteine and tyrosine rich 1).

NR:

description
PREDICTED: cysteine and tyrosine-rich protein 1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU616 True 1348 TUCP 0.51 4 2185859 2192464
XM_043240894.1 False 994 mRNA 0.56 4 2185821 2192072

Neighbor

gene id symbol gene type direction distance location
adamts1 adamts1,LOC107698918,LOC107751074,LOC107593742 coding upstream 1320 2178211 ~ 2184501 (+)
LOC122350785 adamts5,LOC107751075,LOC107593743 coding upstream 14288 2153236 ~ 2171533 (+)
gart gart coding upstream 224178 1942061 ~ 1961643 (+)
LOC122345473 LOC107751076,LOC107593744,LOC107698914,LOC100332351 coding upstream 244200 1937450 ~ 1941621 (+)
zgc:152904 zgc:152904,ncam2,LOC107698913,LOC107751079,LOC107721821 coding upstream 292625 1712042 ~ 1893196 (+)
appa app,appa,LOC107698920,LOC107593741,LOC107751095,LOC103352860,LOC108232458 coding downstream 457 2192921 ~ 2219736 (+)
atp5pf atp5j,LOC107751073,LOC107593738,LOC107698902 coding downstream 28424 2220888 ~ 2223969 (+)
LOC122351075 LOC107593736,LOC107698922,LOC107748323,LOC107665816,LOC107557261 coding downstream 61155 2253619 ~ 2260025 (+)
si:ch73-41e3.7 NA coding downstream 79514 2271978 ~ 2274222 (+)
trmt10c NA coding downstream 83982 2276446 ~ 2281686 (+)
G415 NA non-coding upstream 10205 2174322 ~ 2175616 (+)
G408 NA non-coding upstream 66430 2119116 ~ 2119391 (+)
G404 NA non-coding upstream 104001 2081472 ~ 2081820 (+)
G318 NA non-coding upstream 194054 1930657 ~ 1991767 (+)
G320 NA non-coding upstream 234501 1936173 ~ 1951320 (+)
G450 NA non-coding downstream 82543 2275007 ~ 2275341 (+)
G439 NA non-coding downstream 83528 2275992 ~ 2276271 (+)
G457 NA non-coding downstream 130821 2323285 ~ 2327330 (+)
G440 NA non-coding downstream 180251 2372715 ~ 2373156 (+)
G463 NA non-coding downstream 228012 2420476 ~ 2421647 (+)
LOC122327253 NA other upstream 744155 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 1065100 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1736181 445940 ~ 449640 (+)
G10 NA other upstream 2007621 177716 ~ 178200 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 291176 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 301108 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 319108 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 332061 2524525 ~ 2527244 (+)
G482 dusp27 other downstream 402467 2594931 ~ 2596302 (+)

Expression


Co-expression Network