G4528 (ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977)


Basic Information

Item Value
gene id G4528
gene name ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 19521084 ~ 19522399 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6436
ACATAACAAgcactgatttatttaaatagatgaaacttaaaaaacaaaacaaaaaaaaaaaaacatcactccAAAACAGTAACAAAGAATTTGTTCTCTCACTGGAAGACATTTCAGAGGtgtgttttcatatatatatatatatattccaaaatgtggaaagaaagaacaagaaatgcaaataaaaggtGTTGACAAAGTTCATCAAACCCTGTGCATTTTGATcactttcctcttttttttttttttttattaatttctttttttaataacactcACTACCCTGGACCGGGTGACCTCCAACATATATAAACTCTCAAGGCTTTCCAAAATGAACAattaagagaagaaaaaaaaaaaaaagcttagaaAAGAACTCTTCATTGTCTTATGGACGTTAGTGGCAGTATCTTAAACATCTGTGTTTCCAGGGTTAATTACGTCTGTTGGTCGTCCTAATGCAAAAGCAACAACAGCACCTGTTTGGAAACTTTCAGCTAAGTGCATGAGGAGAACCTTTTAACATAAGTTAAACAAAACCGCCGATCCCCACACAGGCATATTTTCACTTGAACAATCTAGCACATCTTCTGTAAGGCACTACCTGGACCGCCTATCCTTCTTGGCCCTATCCGCACTTTTTTCCATAGTCTTTTCGCTGTCGCCCCTGCATTTGGGGCAATACCATTTCCCCTTGGGCTTGTAGGTGAGTCCAACACAAGAAAAATGGAACCACTCGATGGGACATTGCTCGTTGTCGCAGCCGATCATCTCGCCGTAGGACACCTGTTCGCAGAGGCAGTAGGTGGGCTCGTTGGGGTCGATGGTGAACTCCACCGGCGACGCTTCTCGCTCTTGCTTGGCCTTGGAGCGCTTCTTCTTCTTGGCCGACTTGGACTTCTTCTCACGGGGCTGCTGCGGAGGCTCTTCTCCCAGGTCCTCCAGGGCCCCGTTGGCGCAGGTGTCCCGGCTCTCGCTGTTGCGCTGGCGCCTGGGTCTTCTCGCGGAGGAGCGCTCGGGCATGACGTTCGCCGAGGTGCTGGCCGGGTCGTGCCTCACCTTCTCCGCCGGCCGCTCCGCTTCCGCCGGCTCCAGGAAACAAGGCGAGTGGGCCTCGATCTGACGCGAGCGGTTCTCCACCACCTCCATCATCTGTGTGACCACGTGGATCTTCTCATCTCCCAGCTCCTGACTGCTGATGAGCGCCCGCTGCAACTGAATCTGCAGTCGCTTGCGCTGCCCGCTGTCGGTCTCCTTTTTGTACTTCTCATAGATCTCGTCCACCTCCTTCAGGAC

Function

symbol description
ing2 Predicted to enable methylated histone binding activity. Predicted to be involved in positive regulation of transcription, DNA-templated. Predicted to act upstream of or within several processes, including chromatin organization; negative regulation of cell population proliferation; and regulation of cellular senescence. Predicted to be active in nucleus. Orthologous to human ING2 (inhibitor of growth family member 2).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6436 True 1296 TUCP 0.48 2 19521084 19522399

Neighbor

gene id symbol gene type direction distance location
irf2a irf2a,LOC107671024,LOC107550872,LOC107748823,LOC107559652,LOC107737100,LOC107684969 coding upstream 51655 19464300 ~ 19469429 (+)
tenm3 LOC107737101,LOC107670970 coding upstream 86362 19191093 ~ 19434722 (+)
spcs3 spcs3,LOC107752235,LOC107670941,LOC107550835,LOC107737105,LOC107676690,LOC107558782 coding upstream 648236 18868682 ~ 18872848 (+)
wdr17 wdr17,LOC107670895,LOC107676687 coding upstream 662139 18839950 ~ 18858945 (+)
cep44 LOC107676682,LOC107558780,LOC107670817,LOC107737107,LOC107752226 coding upstream 827696 18687317 ~ 18693388 (+)
sod3b LOC107671542,LOC107748835,LOC107574198 coding downstream 2449 19524848 ~ 19526586 (+)
LOC122331797 aip,LOC107748827,LOC107737096 coding downstream 7988 19530387 ~ 19535903 (+)
lgi2b lgi2b,LOC107550949,LOC107671185,LOC107748826 coding downstream 16932 19539331 ~ 19544378 (+)
ccdc149b LOC107748825,LOC107671163,LOC107559643 coding downstream 22466 19544865 ~ 19552166 (+)
si:ch211-113e8.11 LOC107671245,LOC107552526,LOC107748836,LOC107559641 coding downstream 64176 19586575 ~ 19589162 (+)
LOC122333031 NA non-coding upstream 344257 18993761 ~ 19176827 (+)
G4361 NA non-coding upstream 773331 18747234 ~ 18747753 (+)
G4360 glra3,LOC102780741,LOC101174559,LOC102299625 non-coding upstream 797789 18723075 ~ 18723295 (+)
LOC122340556 NA non-coding upstream 803989 18694169 ~ 18717095 (+)
G4356 NA non-coding upstream 805853 18714947 ~ 18715231 (+)
G4531 NA non-coding downstream 2147 19524546 ~ 19524780 (+)
G4553 NA non-coding downstream 52012 19574411 ~ 19574760 (+)
G4579 NA non-coding downstream 220763 19743162 ~ 19778083 (+)
G4677 dok7,LOC107749932,LOC107674231,LOC107552150,LOC107714234,LOC107679881 non-coding downstream 448377 19970776 ~ 19972265 (+)
G4678 dok7,LOC107714234,LOC107674231,LOC107679881,LOC107749932 non-coding downstream 456570 19978969 ~ 19980622 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other upstream 1236440 18247250 ~ 18284644 (+)
lsm6 lsm6 other upstream 1622538 17896535 ~ 17898546 (+)
gab1 gab1,LOC107725185,LOC107734574,LOC107684448 other upstream 1910339 17551473 ~ 17610745 (+)
LOC122348759 raph1b,LOC107654246,LOC107707841,LOC107719733,LOC107705038 other upstream 3451169 16064271 ~ 16069915 (+)
G3647 NA other upstream 3867703 15653093 ~ 15653381 (+)
scoca scoca,scoc,LOC107671340,LOC107712029,LOC107674238,LOC107737083,LOC107556533 other downstream 193154 19715553 ~ 19777050 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other downstream 620062 20142461 ~ 20145856 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other downstream 719419 20241818 ~ 20243349 (+)
LOC122348864 ctnna2,LOC107706127 other downstream 1799063 21321462 ~ 21361440 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other downstream 2068478 21590877 ~ 21620592 (+)

Expression


Co-expression Network