G482 (dusp27)


Basic Information

Item Value
gene id G482
gene name dusp27
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2594931 ~ 2596302 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU717
TCACCTCGGTGTGTGAGTAAAGCGTCGTCCAGGAACTCTGCACACGAGCGGAAGTGAGGAGAGATGTCAGCGTCTGGGAAGTCGTCCACCTCGATGCCCATGTAGGTGATGTTCATGCCCTGATAAAAGACCTGTCCGGTGTAGACCCCGGTGCCGTGAGCGGCGTTTAACACATGAGTGATGCCCAGCCGCTTCAGACGACCTTTATTCACCGCCACAGACCTGTTCTCTGCGATGTAGAGTCCGGGCCAGACCTCGTCGACGGGGTTGAAGGGCGCCTCCAGACGGTCCTGGGTCAGCGCTCTCTGGATGTCCAGCACACAGGGCGTGTTGTAGGGGCTGCGGTCATCCATCATGTCCTTCACTCTGTTGTAGAGATCCTCCACCATCAGCTGCCTGGCCGACTCCAGCATGCTCTCGGGGGCCGCCGGGGCCCGCAGCTCTCTGGAGCCCAGCTCTGAgaccggacacacacacacacacacacacacacacacacagagactcaaCACTAATCTGTTCACAGCACAGACGCTGAAACTAGTGACTGTGTGCTGCAGAGTTAAACTTCTCTATCCACATCACAGCAAAACAACAgcgttttacaagaaaatgctCTTTCAGGATTTCTACTTTAAAGTTTGTTCTTCAGTTctgtacactcttaaaaataaagctgcttaAAAGCTTCTCCACAGCgtttccacagaagaaatgtttttggttcctcaagaaatttaataatctttaaaagaaGCTTTTTGTGAATGTGCCGTCAGATGCTGAAGGTTCTAtggaaccatttaaacaaaaaacttctTCTGTTGGATCgtgaatctttatttttaagagagtaAATCTCCAGGACCTGCTTCTCAGACCTTCACTGATGATCTTCTTGGCAGCGATGGAGGAGGACAGATGAATCGGCTCCATGAAGATGCTCTCCGCATCCGAGCCGGAGATCATGGAGAAGCGGTCCGACACCGAGGAGAAGCGATCAGACGTCATGGAGAAGCTGtgtgagatcagacacactctcag

Function

symbol description
dusp27 Predicted to enable protein tyrosine/serine/threonine phosphatase activity. Acts upstream of or within skeletal myofibril assembly. Predicted to be located in sarcomere. Is expressed in optic tectum and somite. Orthologous to human STYXL2 (serine/threonine/tyrosine interacting like 2).

NR:

description
PREDICTED: inactive dual specificity phosphatase 27 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU717 True 1044 TUCP 0.30 2 2594931 2596302

Neighbor

gene id symbol gene type direction distance location
cd247 cd247 coding upstream 20954 2564546 ~ 2573977 (+)
creg1 creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633 coding upstream 30512 2561357 ~ 2564419 (+)
adprhl1 adprhl1,LOC107694472 coding upstream 113372 2469473 ~ 2481559 (+)
gas6 gas6,LOC107694478,LOC107573434,LOC107751089 coding upstream 188644 2390877 ~ 2406287 (+)
pros1 pros1 coding upstream 207282 2371927 ~ 2387649 (+)
gpa33a NA coding downstream 51125 2647427 ~ 2654848 (+)
LOC122351317 ildr2,LOC107662109,LOC107751053 coding downstream 59831 2656133 ~ 2676029 (+)
ildr1a LOC107751054,LOC107570078 coding downstream 81996 2678298 ~ 2690765 (+)
tmem39a tmem39a,LOC107662110,LOC107570077,LOC107551106,LOC107751086 coding downstream 95440 2691742 ~ 2700224 (+)
rpl24 rpl24,LOC107575619,LOC107551103,LOC107751658,LOC107662676,LOC107662117 coding downstream 143375 2739677 ~ 2742411 (+)
G518 NA non-coding upstream 5923 2588687 ~ 2589008 (+)
G517 NA non-coding upstream 6258 2588445 ~ 2588673 (+)
G512 NA non-coding upstream 11284 2579316 ~ 2583647 (+)
G505 LOC107751062,LOC107570084,LOC107694469,LOC107551096,LOC107747071 non-coding upstream 52622 2540487 ~ 2542309 (+)
G504 NA non-coding upstream 54530 2539233 ~ 2540401 (+)
G486 NA non-coding downstream 6889 2603191 ~ 2606077 (+)
G527 NA non-coding downstream 29743 2626045 ~ 2627404 (+)
G538 NA non-coding downstream 107220 2703522 ~ 2720923 (+)
G546 NA non-coding downstream 129998 2726300 ~ 2730720 (+)
G719 NA non-coding downstream 689647 3285949 ~ 3286202 (+)
setdb2 LOC107570068 other upstream 36404 2493572 ~ 2558527 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other upstream 67687 2524525 ~ 2527244 (+)
pcid2 pcid2 other upstream 76546 2511572 ~ 2518385 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 105828 2483640 ~ 2489103 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other upstream 402467 2185821 ~ 2192464 (+)
G727 NA other downstream 738356 3334658 ~ 3340876 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other downstream 1040405 3636707 ~ 3699093 (+)
G824 NA other downstream 1760396 4356698 ~ 4357260 (+)
G826 NA other downstream 1761705 4358007 ~ 4358296 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 2341879 4938181 ~ 4944841 (+)

Expression


Co-expression Network