G485


Basic Information

Item Value
gene id G485
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2489483 ~ 2491877 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU721
tatttattaacctcAAACCTTGAAGcataaaaataaccaaacattCACTACAAAAATATCAGCGCAGCAGTCATGTGACCAGACGAATCACCAGACGTGACCGGTGggcttcatcttcatcatcatcatcatcactgtcaggaagctgctgccgatgaagatgatgaagatgatgatgtcACTGACATGCACTTTAGATGTCTTAGGAAAGCACAAGATATAGTTTCAGACTCACATTTATTCACTTCCCTTTTCACTCGAGCAACAAAATGaacttcatcttcatcatcatcatcatgttttTAGGGTTCAGGTTCACACAGATTCACTGCACGAGTCTCACAAAACACCACACTTTAAATCTGTGTGAGCAGACCCcttacagctgtgtgtgtgtgtgtgtgtgtgtgtggaggatcATGGGTAATTCACCAGCGGCTCTATTCAGGTTTCATGATCCAAGAAACAAgaacaaacattaattatttacatcaGGTGTCATTTAATGccagcgtctctctctctctctctcacacacacacacgatctgATATAAACTTGTTTCTACATGAATCCAATTAAATTCAGTACACTAAAAGGTtcagcattttagaataaaGAGCGTGGGTGTCTCAGGATCAGTGTGAACTACCCACAGCAAGATTATTAGAATAAAACAAGTCTGATTTGATGAGGATGAATGAGACTGAAGCTGTGTCTagtccatcacacacacacacacacacaccttacagtacacacatacattgaCCTCACGGAGAAATCACACACACTAATGACCACTGCAGTTGACCCTTGACCCTCACAGcgatctctcacacacacacacacacacacaggttataTCTGTGGTCaggtaataaaaacacattctgaTTAATTGCAGGTGGATCAAATCATTAATGTCGCAAATATTAACTGCATTGTGTGAAATATGAACCTGCTTTCAATGCACTTTTTCCTGCAGAGAGGAAGTGTGTGTCGTGTGTCGTTCAGGTTCAGACTGAAGTTACTAAAGCCTTCGAAAGCAGCCCAAAAACAGCGTCTTGGGTTTCTTTGCTCTGTCCAATGATCATGTGATGATGTTTGAGCTCACCCGCAcatctctaacacacacacacacacacactgcagctgacccctgaccacacacacacacacacacacacactgcagctgacccctgaccacacacacacacacacacacacactgcagctgacccctgacctctcacacacacactgcaggtgACCCctgacctcacacacactgcaggTGACCCCTGACCTCTCACACACTGCAGGTGACCCCTGACCTCACAGCgatctcacacatacacactgcagctgacccctgacctcacacacacacactgcagctgACCCCTGACCTCACAGCGATCACACACACCCAGACACTGCAGCTGACCcctgacctcacacacacacacacacacacacactgcagctgacccctgacctcacacacacacacacacacacacactaatcagAGCGCAGACGGAGTGTGATCAGATGGTCTGGTATCCGGCGTGTGTCCTCTTCCTTCCGATCAGATAGGCGATGAGAACGATCAGCACCAGACCGGCCAGAGCCACGCCCACGATGATGGGGATGAGCATGTTCTCCTGATCCACACGACACTCCTCCACTGCACGCACCTGCAGAGAAGCGTCCGGCCGTGACGTTGAAGGGCTGCAGCTGCAGTCTGAAGGTGTTGATGGAGAAGCTGGAGACGATGGAGAGCGTCTGCTCCGAGCTGCACATGTACGAGCGACCCACGCTGCACTGCAGCAGATTCAGAGAAGCGTTCCTCTCCACGAAACGCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU721 True 1877 lncRNA 0.38 3 2489483 2491877

Neighbor

gene id symbol gene type direction distance location
adprhl1 adprhl1,LOC107694472 coding upstream 7924 2469473 ~ 2481559 (+)
gas6 gas6,LOC107694478,LOC107573434,LOC107751089 coding upstream 83196 2390877 ~ 2406287 (+)
pros1 pros1 coding upstream 101834 2371927 ~ 2387649 (+)
rasa3 rasa3 coding upstream 118348 2334161 ~ 2371135 (+)
LOC122345332 LOC107698899,LOC107751092,LOC107593812,LOC107580773 coding upstream 179095 2301741 ~ 2310388 (+)
creg1 creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633 coding downstream 69480 2561357 ~ 2564419 (+)
cd247 cd247 coding downstream 72669 2564546 ~ 2573977 (+)
gpa33a NA coding downstream 155550 2647427 ~ 2654848 (+)
LOC122351317 ildr2,LOC107662109,LOC107751053 coding downstream 164256 2656133 ~ 2676029 (+)
ildr1a LOC107751054,LOC107570078 coding downstream 186421 2678298 ~ 2690765 (+)
G463 NA non-coding upstream 67836 2420476 ~ 2421647 (+)
G440 NA non-coding upstream 116327 2372715 ~ 2373156 (+)
G457 NA non-coding upstream 162153 2323285 ~ 2327330 (+)
G439 NA non-coding upstream 213212 2275992 ~ 2276271 (+)
G450 NA non-coding upstream 214142 2275007 ~ 2275341 (+)
G504 NA non-coding downstream 47356 2539233 ~ 2540401 (+)
G505 LOC107751062,LOC107570084,LOC107694469,LOC107551096,LOC107747071 non-coding downstream 48610 2540487 ~ 2542309 (+)
G512 NA non-coding downstream 87439 2579316 ~ 2583647 (+)
G517 NA non-coding downstream 96568 2588445 ~ 2588673 (+)
G518 NA non-coding downstream 96810 2588687 ~ 2589008 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 380 2483640 ~ 2489103 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other upstream 297019 2185821 ~ 2192464 (+)
LOC122327253 NA other upstream 1047817 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 1368762 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 2039843 445940 ~ 449640 (+)
setdb2 LOC107570068 other downstream 1695 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 19695 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 32648 2524525 ~ 2527244 (+)
G482 dusp27 other downstream 103054 2594931 ~ 2596302 (+)
G727 NA other downstream 842781 3334658 ~ 3340876 (+)

Expression


Co-expression Network