G486


Basic Information

Item Value
gene id G486
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2603191 ~ 2606077 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU722
AGCCaagaataaacatataaaaataaaacagccatTTTGTTGATCATAAAGTGTTTTTCTAATCTTTTTTACAGCACTCTTCATGAATCTGGTACAAAACAGAATCATTTCTAGTGAATGAAGGTGCAGAAACACGATTGTGACTTTCTTCGTTATTCGTGAATTAAAACCCTGATTCAGTTTGTGTTCCAGAGACGAACATTAATCAAACAGCACAATGAAACCAAACTCATCACGAGCACATTTACAAACGACACATAAAGTACTGTGACGAGGTTCAGGAGATCCTGTGGTTTAATACAACATCCATGAAGAGAGCGAACGTTTGACTTCACTCCAGTGAGATTGGGTCTTGTGTttcaccatcatcatcctcatcatcctcatcatcctcatcacaACCGTACATTCATCACATCATCACTCGTTTAACGAGCAAACCAGACGTTAGTCTTACAGCGCTTCTCCCCCGAAGGCTCCGACCGCTCCACATTCAGCACACTCTTCTCGTCGTGTGTCTTTGGTGTGCATATTTGTGTATTCATGGCTTGCAGATGCTTCACGAAATCCCTAAGAATTACATCTAGACGTGCGACAGAAGGGTTATTACCCATCAGACACTGGGCGAGGATCACAGTGAAGTGGGCAGATGGCAGAATCTGCAGtctattattcaaaaatattccTGCATCATCTGATTTTTAAGGTCTGAGTGTGTTTTAGTTCCAGTCAAAAGGACCAGCGGCTCCATAACAGCCCTGTGCTCGCTAATGAAGCTTGAGTTCAGCTGttcgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtgtgtgcgtgagtgtgtgtgtgtgtgtgagagtgtgtgcgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgagagagtgtgtgtgtgtgtgtgtgtgtgtgtgagagagtgtgtgtgtgtgagagagtgtgtgtgtgtgagtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgaggtgtgtgtgtgtgtgtgttacagtgcAGTCTGTGTGGTTTCATCTGAAGTATTGACGAAGCTGTTTTCTGTATTCCTGTGTGTTATCTGATGGGACTCAGGTCATGTGTTCATGTAGGTCTTACACTTGCTTTGTTTGAGATCAAAACTGACCGGAGGCCATAatcatgtaataatttaaatttcgtgaaataaatatactatatttaatttcacaaaaatatctcATTCAACTGtatttcatgttatttaatattagtatCGTAATTATGGACtattttctgtatataaaaaaactaaatgataatTAGTTTCAGTTAATGCAGTATTCAAGTTAAAATTAGaacaaaagcattaaatgtGTAGCCATATAGGACTGAGCAATATATCACGATATATTCATCCACAAAACTGAACGTGATAATGTGTAGCTCATCAGTGAACCGGCTTCATAACtgacctatatatatatgtatatatatatacacactttcattcattaaaagcaTGACCGTTCTGACATCATCTGCACTCTGTATGTAGATTTCTGGGTAACTACTAAGAGTGTAACAGTAAGAAGTGTGTAACAGTAAAAGATGTTGTTATGGGTGTCTTGGTTTAGTATGCATGCACACTGAACAGAAACAGCGCCATTTTAAGCACTGCACAAGTTTCTgaacttcattaaaaaactTCCAGTTGTATGCCCTTTCCCTTTCCCTGCTAGTTTTTAACAtgtaataaacatgaatgaacttCTCATGCCTCATGCAATCACTCAGTCAGTGTTTCAATCACAGCAAGATaccacaaaaaaatatcatCTGGCATTTTAGGCAGTGAATGCACTCTTTTTGAACCAAAACACCAGGCAAAAGAATCCAGCACagactgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagattgtaCGTCGCTTGTGCGTTAGCTCCAAGTTTGCGCTCAGTTCGTGTCTGAGTGAGGTAGCAGCGGCAGGGCAGCTTCGCTGGGGTCCGAGTCGCCGGAGCTCAGCAGCGCCTCCATCTGTTTCTCCAGCAGCGCCACCAGCTGGCTGCTCTTGTCTGCGCAGTCGTCAGTGAACTGGAGGTAGGGTGTGTTCTTCAGAGCGTCGGGCAGACAGGGCACCAGGTGCAGCGCTCCGCCGGGCGTCACGCCCTTCACGCAGGTGTAGAAGTCCTGCGGCGGCACCAGGGCGGGGCTTATTATCATGCTGTAGTCTGTGCCTGGGACGCACATGAGCTCAGAATGGGCGGGGCCAGGGTTCAAACTGGGTGGGGCTCCCTCACAACAAGGGGTGGGGCCGTGGTTTGGAGGAGGCAGGGCTCCCTCACAATAGTGGGTGGGGTCAGAATTGGAAAGAGGCATGGGTGCCTCGCAGTAGGGGGTGGGGCCATGGCAGTATGGCGCAGGACTGCAGCTCTGAGGCGCAGGCGGTTGTCTGTCTGCGATCAGTGCATCCTCACGTTTATACGGAGTCGCAGCCGGACACGGGTCCACGCTCAAATGGTACCACGTCTCCATGCTGTACTGCGGCGACTTATAACCGTGAAAGCTGGAGAAATGGCGATTGATCTCGTCAATCTTCCC

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG:

id description
ko04530 Tight junction

RNA

RNA id representative length rna type GC content exon number start site end site
TU722 True 2807 lncRNA 0.43 2 2603191 2606077

Neighbor

gene id symbol gene type direction distance location
cd247 cd247 coding upstream 29214 2564546 ~ 2573977 (+)
creg1 creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633 coding upstream 38772 2561357 ~ 2564419 (+)
adprhl1 adprhl1,LOC107694472 coding upstream 121632 2469473 ~ 2481559 (+)
gas6 gas6,LOC107694478,LOC107573434,LOC107751089 coding upstream 196904 2390877 ~ 2406287 (+)
pros1 pros1 coding upstream 215542 2371927 ~ 2387649 (+)
gpa33a NA coding downstream 41350 2647427 ~ 2654848 (+)
LOC122351317 ildr2,LOC107662109,LOC107751053 coding downstream 50056 2656133 ~ 2676029 (+)
ildr1a LOC107751054,LOC107570078 coding downstream 72221 2678298 ~ 2690765 (+)
tmem39a tmem39a,LOC107662110,LOC107570077,LOC107551106,LOC107751086 coding downstream 85665 2691742 ~ 2700224 (+)
rpl24 rpl24,LOC107575619,LOC107551103,LOC107751658,LOC107662676,LOC107662117 coding downstream 133600 2739677 ~ 2742411 (+)
G518 NA non-coding upstream 14183 2588687 ~ 2589008 (+)
G517 NA non-coding upstream 14518 2588445 ~ 2588673 (+)
G512 NA non-coding upstream 19544 2579316 ~ 2583647 (+)
G505 LOC107751062,LOC107570084,LOC107694469,LOC107551096,LOC107747071 non-coding upstream 60882 2540487 ~ 2542309 (+)
G504 NA non-coding upstream 62790 2539233 ~ 2540401 (+)
G527 NA non-coding downstream 19968 2626045 ~ 2627404 (+)
G538 NA non-coding downstream 97445 2703522 ~ 2720923 (+)
G546 NA non-coding downstream 120223 2726300 ~ 2730720 (+)
G719 NA non-coding downstream 679872 3285949 ~ 3286202 (+)
G771 NA non-coding downstream 1114187 3720264 ~ 3720539 (+)
G482 dusp27 other upstream 6889 2594931 ~ 2596302 (+)
setdb2 LOC107570068 other upstream 44664 2493572 ~ 2558527 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other upstream 75947 2524525 ~ 2527244 (+)
pcid2 pcid2 other upstream 84806 2511572 ~ 2518385 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 114088 2483640 ~ 2489103 (+)
G727 NA other downstream 728581 3334658 ~ 3340876 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other downstream 1030630 3636707 ~ 3699093 (+)
G824 NA other downstream 1750621 4356698 ~ 4357260 (+)
G826 NA other downstream 1751930 4358007 ~ 4358296 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 2332104 4938181 ~ 4944841 (+)

Expression


Co-expression Network