G5178


Basic Information

Item Value
gene id G5178
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22385266 ~ 22387528 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU7385
CTTCAACGTATCTATGTATAATGGAAGCAGGAGGACAGCATCCAAAGACCCAGAGAGTTTTCATTCCCTTCATCAGATGTTGATGTGAATAAATCGGTCAGTTTATAATCTACAATTATCTGTAAACCGACAAAGAATGTAGTAAAATAGGATTTAAGTCGTTCCCGCAGATAAAGTTCCTTaaagtttcacaaaaataatcacTTGGGAACATAACAGCTTATTTCAAAAAGCGATTTAGTCAGCATGGCATTAAataggattttatttttcattattcagcatttatttctgAGGCTTAAAATGGTCACACACACTCGTGACCCTTCTGTACCTCAGCCACCATTTATATTAGACAGTAAAACACATTCAACATCATTTTTTCGTCATTATCATCAGTGCAAAAATGCTAATCAAGCAAAATAAGAATCCGCTTACTGTTATTCTCTACAATCTCTAACGTGttttaaaaagctattaaaaaagcCAGtggtaaaacaaataaattaaatagtagTTGGCGATCCTTTCGGTTCTCGTAAACGTATAAAACAAACCGTCTCAGCATAAAAGactgaaacaaagcaaaagcaTCGAGGGTTGAGGAATTTGTACATCTCGGTGAGGtttcagagggaaaaaaaaaatacattgattaTGGACAGCTTTTAGGTTGGTGAATATGGGAAGGATGACATTTGGCTTTGGAGTGCGAGGAAGATGTGCTCCATCACTGGACACGGTATACCTGGCACTCGTTCAGCAGGATCACAATTTAAACTCATCCACATCTTCACGGCATTATATTACAGGTGTTTttgttcatctctctctcttttttgcttTGTGAATGTGCAATAACAAAATAAGGCATCCACCTCGTCTACCTGAAGCATAAGTAGTTCTGCATTTCTGAAaggctgaacacacacacacacacacacacacacacagattaacATGAAGCATTAACAACACTCCTCATGAAAGCCTTCTGCATTGCCTTTCTTCATTTTGTCACTCATTTTTCACTCTCTGCCGAACTCACTTTCTCACTCACTACCGCTTTTCACTTCCTCACACTCTTTACCACTCTGGCTCTCTACCGCATCCACTTCCTGACTCTTTATCACACTCACTACCACGCAATCACTCCCTCACTCTACTGCTCTTCCTTCTTTGATCTCTAGCACTCTTTACCACACTCACTCTCTACTATATCCACTTCCTGACTCTATTCCATTCACTTCCTTCCTACAGCTCTCACTTCTTTGCTCCCTATCACAATGATTTCCTTATCTTTCCTACTACTCTTCGAAAAATCTTTTTATCATTCTTGATTTCGTTCTCCTCCAATGTATCCATCCGTCCACATTTACATCACAGCAGTCAATCCATCTGTCTTCTACACTATTTGGgcacctttttttatttactcccaCTGAGAGTAAAAATGATTTCctattataataatagaatTTATTCACCTACATAGCTTTCCACTCTGTTGACcctcattaaaatacattttagatatCAGGAACGGTGTTAAACAAATCTGCAGTGACTTTTCCTAATAAGTTGGGTCTTTCTAAACCTATACAGTCTTCTCTCAGTTTCAGACCTTCAACAATGCATCTTGGGCATTTTTAGTCTAGATGGCATCTTATGAGAGGAGTTGCCAATGCATGTTCAGGTTGTggccgtacacacacacacacacacacacacacacacacacactctatctcCACTGAACTGGTATCCTCAAGAAAACCAAACTTATGGATAGTGGTATACTGACCGCTACTGTAGACAATTTTTCTCATGACTCcctaaacatctaaaaaaaaatgtagagcCCCATATTTCAGTGGCAAGGGATCTCATGGAGTGGTTCCTCTGCCTCGGCGGGCCTCACAGTCATTAGACCCTGTCTTTGTAGAGTCTTGAGCCAAAATCCCAAAGGCATAACAGAGTCACAGTTTTGGTGACAAGttgtgggtaatgtagttttaacAGGGTCTAAATCACAGCATCTTTGGTGGCTTTCCAACAATCTTATTGATTCAGAAgtcttttcttctgtatttatCTTCATATTCTTCAGCCCCTGCTTGGGCTGCTTCTCTTTCCAGTGCCCTTCGACCCTGCATTACTCCCTTTTCAGCAGTCTGACACTCCAGAGAAGTCCAAGTTGGGGTCCCTGGTGAGGTTCTTCCTCTGACGGACAGTCTTC
>TU7390
CTTCAACGTATCTATGTATAATGGAAGCAGGAGGACAGCATCCAAAGACCCAGAGAGTTTTCATTCCCTTCATCAGATGTTGATGTGAATAAATCGGTCAGTTTATAATCTACAATTATCTGTAAACCGACAAAGAATGTAGTAAAATAGGATTTAAGTCGTTCCCGCAGATAAAGTTCCTTaaagtttcacaaaaataatcacTTGGGAACATAACAGCTTATTTCAAAAAGCGATTTAGTCAGCATGGCATTAAataggattttatttttcattattcagcatttatttctgAGGCTTAAAATGGTCACACACACTCGTGACCCTTCTGTACCTCAGCCACCATTTATATTAGACAGTAAAACACATTCAACATCATTTTTTCGTCATTATCATCAGTGCAAAAATGCTAATCAAGCAAAATAAGAATCCGCTTACTGTTATTCTCTACAATCTCTAACGTGttttaaaaagctattaaaaaagcCAGtggtaaaacaaataaattaaatagtagTTGGCGATCCTTTCGGTTCTCGTAAACGTATAAAACAAACCGTCTCAGCATAAAAGactgaaacaaagcaaaagcaTCGAGGGTTGAGGAATTTGTACATCTCGGTGAGGtttcagagggaaaaaaaaaatacattgattaTGGACAGCTTTTAGGTTGGTGAATATGGGAAGGATGACATTTGGCTTTGGAGTGCGAGGAAGATGTGCTCCATCACTGGACACGGTATACCTGGCACTCGTTCAGCAGGATCACAATTTAAACTCATCCACATCTTCACGGCATTATATTACAGGTGTTTttgttcatctctctctcttttttgcttTGTGAATGTGCAATAACAAAATAAGGCATCCACCTCGTCTACCTGAAGCATAAGTAGTTCTGCATTTCTGAAaggctgaacacacacacacacacacacacacacacagattaacATGAAGCATTAACAACACTCCTCATGAAAGCCTTCTGCATTGCCTTTCTTCATTTTGTCACTCATTTTTCACTCTCTGCCGAACTCACTTTCTCACTCACTACCGCTTTTCACTTCCTCACACTCTTTACCACTCTGGCTCTCTACCGCATCCACTTCCTGACTCTTTATCACACTCACTACCACGCAATCACTCCCTCACTCTACTGCTCTTCCTTCTTTGATCTCTAGCACTCTTTACCACACTCACTCTCTACTATATCCACTTCCTGACTCTATTCCATTCACTTCCTTCCTACAGCTCTCACTTCTTTGCTCCCTATCACAATGATTTCCTTATCTTTCCTACTACTCTTCGAAAAATCTTTTTATCATTCTTGATTTCGTTCTCCTCCAATGTATCCATCCGTCCACATTTACATCACAGCAGTCAATCCATCTGTCTTCTACACTATTTGGgcacctttttttatttactcccaCTGAGAGTAAAAATGATTTCctattataataatagaatTTATTCACCTACATAGCTTTCCACTCTGTTGACcctcattaaaatacattttagatatCAGGAACGGTGTTAAACAAATCTGCAGTGACTTTTCCTAATAAGTTGGGTCTTTCTAAACCTATACAGTCTTCTCTCAGTTTCAGACCTTCAACAATGCATCTTGGGCATTTTTAGTCTAGATGGCATCTTATGAGAGGAGTTGCCAATGCATGTTCAGGTTGTggccgtacacacacacacacacacacacacacacacacacacacactctatctcCACTGAACTGGTATCCTCAAGAAAACCAAACTTATGGATAGTGGTATACTGACCGCTACTGTAGACAATTTTTCTCATGACTCcctaaacatctaaaaaaaaatgtagagcCCCATATTTCAGTGGCAAGGGATCTCATGGAGTGGTTCCTCTGCCTCGGCGGGCCTCACAGTCATTAGACCCTGTCTTTGTAGAGTCTTGAGCCAAAATCCCAAAGGCATAACAGAGTCACAGTTTTGGTGACAAGttgtgggtaatgtagttttaacAGGGTCTAAATCACAGCATCTTTGGTGGCTTTCCAACAATCTTATTGATTCAGAAgtcttttcttctgtatttatCTTCATATTCTTCAGCCCCTGCTTGGGCTGCTTCTCTTTCCAGTGCCCTTCGACCCTGCATTACTCCCTTTTCAGCAGTCTGACACTCCAGAGAAGTCCAAGTTGGGGTCCCTGGTGAGGTTCTTCCTCTGACGGACAGTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7385 False 2239 lncRNA 0.34 2 22385266 22387528
TU7390 True 2243 lncRNA 0.55 2 22385266 22387528

Neighbor

gene id symbol gene type direction distance location
map2k7 map2k7,LOC107712243,LOC107692141,LOC107676852,LOC107718577 coding upstream 1297 22371229 ~ 22383969 (+)
pkn1a LOC107712223,LOC107676851,LOC107603033,LOC107561874 coding upstream 14654 22338779 ~ 22370612 (+)
si:ch211-214c7.4 LOC107676873,LOC107561873,LOC107712236,LOC107692142,LOC107718585,LOC107603029 coding upstream 51443 22309897 ~ 22333823 (+)
mcoln1a mcoln1a,mcoln1,LOC107561871,LOC107676888,LOC107603030,LOC107718592 coding upstream 75880 22296032 ~ 22309386 (+)
trappc5 trappc5,LOC107692146,LOC107712234,LOC107676838 coding upstream 90067 22293448 ~ 22295199 (+)
lipt1 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 coding downstream 24629 22412157 ~ 22414170 (+)
eif5b eif5b,LOC107567794 coding downstream 27110 22414638 ~ 22426760 (+)
arhgef7b arhgef7b,LOC107567796,LOC107676887,LOC107718510,LOC107692139,LOC107746262 coding downstream 39456 22426984 ~ 22448303 (+)
sox1b sox1b,sox1a,LOC107746263,LOC107567792,LOC107676867,LOC107692134,LOC107718482,LOC107603037 coding downstream 127938 22515466 ~ 22518610 (+)
tubgcp3 tubgcp3,LOC107692132,LOC107746265,LOC107718870 coding downstream 216209 22603737 ~ 22621251 (+)
G5159 NA non-coding upstream 149737 22232347 ~ 22235529 (+)
G5134 ddx39aa,LOC107712218,LOC107676896,LOC107603018,LOC107692155,LOC107551870 non-coding upstream 315132 22068067 ~ 22070134 (+)
G5132 NA non-coding upstream 343154 22041866 ~ 22042112 (+)
G5112 NA non-coding upstream 433931 21945811 ~ 21951335 (+)
G5111 rps6,LOC107603014,LOC107551827,LOC107676127,LOC107720314 non-coding upstream 480157 21899050 ~ 21905109 (+)
LOC122350977 NA non-coding downstream 138594 22526122 ~ 22530488 (+)
G5206 NA non-coding downstream 151742 22539270 ~ 22539472 (+)
G5223 NA non-coding downstream 328008 22715536 ~ 22733117 (+)
LOC122346574 NA non-coding downstream 347906 22735434 ~ 22741631 (+)
LOC122331092 NA non-coding downstream 364958 22752486 ~ 22757654 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other upstream 750214 21632215 ~ 21635052 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other upstream 764674 21590877 ~ 21620592 (+)
LOC122348864 ctnna2,LOC107706127 other upstream 1023826 21321462 ~ 21361440 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other upstream 2141917 20241818 ~ 20243349 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other upstream 2239410 20142461 ~ 20145856 (+)
LOC122348949 LOC107676845,LOC107560973,LOC107718848,LOC107692180,LOC107603005,LOC107746297,LOC107735984 other downstream 453160 22840688 ~ 22851393 (+)
G5559 epc1a,LOC107568137,LOC107654560,LOC107753261,LOC107653121,LOC107582192,LOC107706605 other downstream 1155536 23543064 ~ 23554625 (+)
G5649 LOC107676039,LOC107729348,LOC107594453,LOC107578077,LOC107729349,LOC107676194,LOC107706808 other downstream 1895954 24283482 ~ 24293329 (+)
hadh hadh,LOC107594428,LOC107729339 other downstream 2169269 24556797 ~ 24558929 (+)
G5817 NA other downstream 2316320 24703848 ~ 24704319 (+)

Expression


Co-expression Network