G5289


Basic Information

Item Value
gene id G5289
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22864834 ~ 22865790 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU7573
GTCCAACTGAGTTTTATTTGCAACATTAAGACAACACACTGCTTCTACATTGATAACAATACGCTGTCATCAACATATTTACTTCTCggtttgtaatatattatactCCATTCAAAGTTTTAAACATAGACACATATATTACTGTTCAGTCAATGGGGCTTTGCTCATTAAAAAACTAATGGAGGTACGGGCAAGTCTTCTGGTCTGAAATGTACAGTGTGCGTGATGAGAGGAGAGggaaggagaggaagagaggaggaaAGGAAAGACCCCTTGCATTGTCTGGAATATTCTTTGAGATGAGGTTTGGGGAAAGTGACCCAGCAGAAAGCATTCGAAGCACTAAGAATCACTCTTTCTCTTATataggcgcacacacacacacacacacacacacacatagaaaaaCCAAGTGGAATAACTTGCTGGCCCCACAATAGCTGTTTTCCTTGATCACTCTGGCATCTCACTAGCACAGCAGTGGaatattaatgtgtgtattgCATCTAAGAcaggaaaacacacaaatgaacaaaaccGATCCCCCGCTACAGTCCAAAAGAAAATGGCACCTTTCTCAGGTTCAGTAGTGCGATAACCGAGGGCAAAATAATAAGACAGACGCGAATTCTAAAACATTTCATCATCCGTGAAAAAACAGTGGGCTTTTACTATGACATATCTGAAGAACTGGACACATTTGCAGCAGATACCGGTGAAGATCGATCCCTTTTGCTCACTGGTGCATCGTTTCAACATCGTTTCTACTTGCCAAACCCTTTAACGCTACAAACAGTCCTgctatttttctgaaaataaacaacaaaaaagcaaataagAACAGttacaaaatatgaactttttttttacaaatatgacaTGACTACAGTGTTGATCACTAATGCCTAACAACAgcacaacaattaaaaaaaatacataaatcaaaaacaaactgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7573 True 957 lncRNA 0.42 1 22864834 22865790

Neighbor

gene id symbol gene type direction distance location
arl11 arl11,LOC107676843,LOC107746302,LOC107560992,LOC107603040,LOC107718406 coding upstream 152873 22710993 ~ 22711961 (+)
cab39l cab39l,LOC107676861,LOC107718429 coding upstream 169093 22685839 ~ 22695741 (+)
mcf2la mcf2l,mcf2la,LOC107676858,LOC107692131 coding upstream 180216 22623552 ~ 22684618 (+)
tubgcp3 tubgcp3,LOC107692132,LOC107746265,LOC107718870 coding upstream 243583 22603737 ~ 22621251 (+)
sox1b sox1b,sox1a,LOC107746263,LOC107567792,LOC107676867,LOC107692134,LOC107718482,LOC107603037 coding upstream 346224 22515466 ~ 22518610 (+)
cryzl1 cryzl1,LOC107560977,LOC107603049 coding downstream 36966 22902756 ~ 22909636 (+)
cbr1 cbr1,LOC107746284,LOC107560976,LOC107692178,LOC108428204 coding downstream 47850 22913640 ~ 22916406 (+)
morc3b LOC107603048,LOC107692193,LOC107746056 coding downstream 50755 22916545 ~ 22925622 (+)
bcl9 bcl9,LOC107746285,LOC107676875,LOC107566537,LOC107746055,LOC107692115,LOC107603052 coding downstream 70079 22935869 ~ 23020832 (+)
gja8b cx44.1,LOC107566539,LOC107746070,LOC107746288,LOC107603011,LOC107692191 coding downstream 172054 23037844 ~ 23039022 (+)
G5264 NA non-coding upstream 55804 22807650 ~ 22809030 (+)
LOC122331092 NA non-coding upstream 107180 22752486 ~ 22757654 (+)
LOC122346574 NA non-coding upstream 123203 22735434 ~ 22741631 (+)
G5223 NA non-coding upstream 131717 22715536 ~ 22733117 (+)
G5206 NA non-coding upstream 325362 22539270 ~ 22539472 (+)
LOC122351271 NA non-coding downstream 176459 23042249 ~ 23044134 (+)
G5522 neurl1,LOC107746293,LOC107746052,LOC107692176,LOC107676877 non-coding downstream 283402 23149192 ~ 23153598 (+)
LOC122350314 NA non-coding downstream 287944 23153734 ~ 23154301 (+)
LOC122350307 NA non-coding downstream 315213 23181003 ~ 23182431 (+)
G5548 NA non-coding downstream 605480 23471270 ~ 23471530 (+)
LOC122348949 LOC107676845,LOC107560973,LOC107718848,LOC107692180,LOC107603005,LOC107746297,LOC107735984 other upstream 13441 22840688 ~ 22851393 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other upstream 1229782 21632215 ~ 21635052 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other upstream 1244242 21590877 ~ 21620592 (+)
LOC122348864 ctnna2,LOC107706127 other upstream 1503394 21321462 ~ 21361440 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other upstream 2621485 20241818 ~ 20243349 (+)
G5559 epc1a,LOC107568137,LOC107654560,LOC107753261,LOC107653121,LOC107582192,LOC107706605 other downstream 677274 23543064 ~ 23554625 (+)
G5649 LOC107676039,LOC107729348,LOC107594453,LOC107578077,LOC107729349,LOC107676194,LOC107706808 other downstream 1417692 24283482 ~ 24293329 (+)
hadh hadh,LOC107594428,LOC107729339 other downstream 1691007 24556797 ~ 24558929 (+)
G5817 NA other downstream 1838058 24703848 ~ 24704319 (+)
LOC122329747 ndufaf5,LOC107594415,LOC107583196,LOC107684300,LOC107675590,LOC107756989 other downstream 2118256 24984046 ~ 25398340 (+)

Expression


Co-expression Network