G56


Basic Information

Item Value
gene id G56
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 393299 ~ 393852 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU86
AAACACCACCACCAGGATATCATAACAGCTAGCCTTCTCATACAGGGcctaaaacacacatgcaagaAACAGTCAATAAATACCTCAATTATACTAGAACTGGATTGAGAGAATTTTCCAGTAATCACAATATAgcgataaaatataataaagatatgaaaagaacaaaaaaaaagacttaaccACAAGACTATTACAAAAGATGTAAATAAACAGTCAcaagaaaagaacaaatgaaaacatgtaaTAACTAAACAACGAAACTCAAATTAAGTAGGTCGCACTGGACACTAGCAGGAAGCCGATCACTGAATGGGAGCCGGTCAACGCTCGCCAAACGCGCACAGTGATGAACCGACCATCTCTATTTCCATAGCCTTATGTTTCAGCATTAAACCAGGAACAGAGgaaaagcagcaaaacagcagcaCAGTCTTAATCTGTAGGCTGCAATCGAAGCATCTCCACGGAATATCCTGCTAAAATTTAACAATTCGTTAACCAAATTAAcaaatgtaatacataaaaatacactaatACATACCCAAATCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86 True 554 lncRNA 0.50 1 393299 393852

Neighbor

gene id symbol gene type direction distance location
gli3 LOC107749627,LOC107747788,LOC107554716,LOC107598194,LOC107694915,LOC107694564 coding downstream 31696 210723 ~ 361603 (-)
prpf4bb prpf4bb,LOC107738454,LOC107749644,LOC107598186,LOC107670278,LOC107554722,LOC108442973 coding downstream 187740 193211 ~ 205559 (-)
ccr9b ccr9b,LOC107598203,LOC107749654,LOC107675310,LOC107726711,LOC107703604 coding upstream 10830 404682 ~ 408086 (-)
lztfl1 lztfl1,LOC107701792,LOC107675311 coding upstream 29048 422900 ~ 433678 (-)
trnag-gcc NA coding upstream 45202 439054 ~ 439128 (-)
LOC122353666 NA coding upstream 233848 627700 ~ 627818 (-)
LOC122342059 ncam2,LOC107748174,LOC107756756,LOC107673712,LOC108426076,LOC107721821 coding upstream 372374 766226 ~ 826226 (-)
G51 NA non-coding downstream 171971 218929 ~ 221328 (-)
G50 NA non-coding downstream 172225 218579 ~ 221074 (-)
G19 NA non-coding downstream 215098 177676 ~ 178201 (-)
G18 NA non-coding downstream 226972 166097 ~ 166327 (-)
G6 LOC107683095,LOC107600734,LOC107716905 non-coding downstream 340711 52167 ~ 52588 (-)
G66 NA non-coding upstream 28280 422132 ~ 422409 (-)
G70 NA non-coding upstream 48027 441879 ~ 442209 (-)
G72 NA non-coding upstream 53656 447508 ~ 447882 (-)
G73 NA non-coding upstream 54476 448328 ~ 448640 (-)
G99 NA non-coding upstream 329893 723745 ~ 724036 (-)
G20 NA other downstream 206214 186420 ~ 187085 (-)
G67 NA other upstream 41956 435808 ~ 436125 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other upstream 344285 738137 ~ 748364 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other upstream 682336 1076188 ~ 1231647 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other upstream 1198217 1592069 ~ 1604984 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other upstream 2294913 2688765 ~ 2689464 (-)

Expression


Co-expression Network