G652 (creg1,LOC107694464,LOC107751059,LOC107551109,LOC107739160,LOC107654633)


Basic Information

Item Value
gene id G652
gene name creg1,LOC107694464,LOC107751059,LOC107551109,LOC107739160,LOC107654633
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2562191 ~ 2564410 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU995
AAATCTGCTCTTTATTTCACTGCATCACgtcaaaaatgattaaaaatacacatcagCTTTAGAAAAATAATCACTCTGAATAAATGATTCGTCTGGAGCGGTGCGTAAAAACACACGACTACGACTACAAAACACTTCTGGTGAGACTCACACTTCCTGCtacggggtcagaggtcaacgTTTAGGGGTGACGTCTAAGACTGACCCAGAATCTCACTTCAGatttcagtctgtgtgtgtttgctgtgaaTCAGTCGAAGGAAAGCGCTTGTGCAAACTGCAAAAAATCATTCGgaagcattttacaaaaaatgcttaCAAAAAATGTGGCAACTAGATTAACATCATGCTGCATTAATGTTCTGGAGAAATTAACAACATGGGCTTAatgcatctcacacacacacacacacacacacacacacacagtaacaccCTGAGAAACATTCATCACTCTGGTCTCTTCTGAAACTCTTCATCAGTGATTCTGATCCGGTTCACCAGGATTACAGCGTGTCACTTCcGGTAAGGAGTCGCTTGGTAATACTCCTCCGGCGTGACGGTTTTCACTCCACCGAAGTAATCGAGGACCCAGACCTGTGTGATGTTCATCTTAGCGAAGAACCAGCTGTGGTCTGTGGGCCAGTCGATCATCTCTGGGTGTCTACTGAACAGAGCGGCTTTAGCCACCGAGGCCTCGCTGCCGTTCACTTTTACCTCCACCACGGAGCCTGACAGGATGATGTGGGCACACAGCGGACTCTGAGGATCGAACCCATGATTCTTACAGTAGCTGGTCTGAGccaaagacacagagagagacgcCTGGGGATTcacctgtcacacacacacacacacacacacagatctgatCATCAGTCATCTGCAGTGTGTTCATGTTTCTAACTTCAGTTCTGCTGAATGTAGATAAACATTCTGCTGCGTCACGTCCTGACAGTCACGTGCTGAATCACacttacataaaaacacattagtgTTTCAGtcataacacacaaaaaaaaaaaaattaaaaataca

Function

symbol description
creg1 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in blood. Orthologous to human CREG1 (cellular repressor of E1A stimulated genes 1).

NR:

description
PREDICTED: protein CREG1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU995 True 1038 lncRNA 0.37 3 2562191 2564410

Neighbor

gene id symbol gene type direction distance location
LOC122351178 LOC107739159,LOC107694465,LOC107570071,LOC107751098,LOC108429813,LOC108258592 coding downstream 1852 2559530 ~ 2560339 (-)
f7l LOC107751062,LOC107694469,LOC107570084,LOC107551096,LOC107747071 coding downstream 17205 2540488 ~ 2544986 (-)
f7 f7,LOC107747062,LOC107654615,LOC107551097,LOC107570083 coding downstream 21776 2536351 ~ 2540415 (-)
f7i f7,LOC107747061,LOC107654598 coding downstream 27538 2530896 ~ 2534653 (-)
f10 LOC107654567,LOC107751061,LOC107694470,LOC107570070 coding downstream 32703 2524609 ~ 2529488 (-)
pou2f1a pou2f1,LOC107751057,LOC107662118,LOC107654677 coding upstream 10332 2574742 ~ 2588258 (-)
dusp27 dusp27 coding upstream 25237 2589647 ~ 2597889 (-)
LOC122353060 LOC107570085,LOC107751087,LOC107711130,LOC107576869 coding upstream 39994 2604404 ~ 2628263 (-)
LOC122345881 prss23,LOC107570079 coding upstream 136080 2700490 ~ 2704267 (-)
LOC122342272 LOC107751049 coding upstream 146307 2710717 ~ 2717844 (-)
G653 creg1,LOC107751059,LOC107739160,LOC107654633,LOC107551109,LOC107694464 non-coding downstream 225 2561355 ~ 2561966 (-)
G638 NA non-coding downstream 3327 2556243 ~ 2558864 (-)
LOC122351916 NA non-coding downstream 9930 2548924 ~ 2552261 (-)
G647 NA non-coding downstream 46016 2515654 ~ 2516175 (-)
G640 NA non-coding downstream 51502 2474322 ~ 2510689 (-)
G666 NA non-coding upstream 88307 2652717 ~ 2654832 (-)
G681 NA non-coding upstream 175817 2740227 ~ 2742428 (-)
LOC122351434 NA non-coding upstream 256778 2821188 ~ 2833731 (-)
G692 NA non-coding upstream 502401 3066811 ~ 3070069 (-)
G695 NA non-coding upstream 547860 3112270 ~ 3120797 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other downstream 957207 1592069 ~ 1604984 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 1330544 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 1813827 738137 ~ 748364 (-)
G67 NA other downstream 2126066 435808 ~ 436125 (-)
G20 NA other downstream 2375106 186420 ~ 187085 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other upstream 124355 2688765 ~ 2689464 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 572098 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 1443430 4007840 ~ 4014287 (-)
G820 NA other upstream 1733900 4298310 ~ 4299193 (-)
mdh1b mdh1b other upstream 2391709 4956119 ~ 4960210 (-)

Expression


Co-expression Network