urp2 (LOC107698908)


Basic Information

Item Value
gene id urp2
gene name LOC107698908
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1465437 ~ 1469101 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235983.1
ATGGTCACGACCGCCTTTGATGAAGGGACACCGAAGTCTCTGGATGCACTTGCTTTAACGGATTCAAAATGCTGTTATTTCCTTTCAGATCCGTGGAGAAACGCTGAGGAAGATGCAGCGCAAGCGACGAGGATTCTTGAGAAGCTACTGAAGACCAGACCGATGACGACATCTCCGGACGGAGATGGAAAAACCGTAGCCATGAAAGCATTAGACGAAACGATTGCAGCGACAAGCGGCCCAAACATCAGACACAGAACCTCAGACACGGGTGTCAATAATACACTTAAGCCACTAACTCTTCTTTCTGAAGGACACGAGGAGATTCGTGATGGTTCTCCGAGGACCGACCGCACGACCCGCTCACCTGATTCCCAGCGGCATGCCGAGAAGAACCGACCGCTCAGACCGTCAAAGCCGATCGATTCAAACGAAAACGACACTCCGCCAGCGGCCGACCGATCGGACCCGGTCACCGCTCGGGAGGAGCTGGTGAAGATGCTGGGTGCTCTTGAAGAGCTTCACAAGTTGATGAACCGCACACTGAGCCATCGAATCACCATCATAACCAGAGGAAACAGCAACGGACTGAGTACTGGGAAGAAGAACAAAATGACAGTCACGGACGGAAACCTGAAATCTACCACAGCGACCACTATAGACGGTGGTGGGATTTCACCGAAGGCCAGCACTGATCAAATGGATCCCAAGCTCAACGGAAAAGCCTATAAAAAGTCTCTTCCGTCAGCTAAGAAAACCAACAAGCGAGTGTGCTTCTGGAAGTACTGCTCTCAGAACTGAGACGAGCTTCCCATTTCTCCCTCGTTTCACCAAGCAACAAATCCTGTTCTCAAACAGAGATGCTTAAACTCTTCCCAAAGGACCGTCAATAACACGACTGACCCCTCTGACCTCTGTGACGTGTGTACCTTTGACTTTGTGCACGAAATGCTCTTAACCTTTCACCTACAACACCTTCGTTGTTGCAAGCCCCAATAAAAGCGAGAAAGCATGCAAAAAATACTGTGATAATAAAGAGAACTTTATTTTTCTACGGATATCTCTCTCGGTGGTCATTGCAAAGTGTTTAAAGAGTGAGCTCGAAGGCAGAGGTCACTATGGCGACGAAGTCGACTGGAAAGACAAAGCTGTTGATATTACGCCGTCGAAATCGATCTGATTGCTCAAATAGTTGCCGTCGCTTGGGCGACGCTCATCGAGACCCGACAGAAGACCAGACAACGAGTCATTTCGCTCGTATCTTCACGCGGCGCTCGTTCATCACACGGGAAGGAAATTAAAAACCATTGAGGCTTAATGATGaattctgattggtttattTAAAGTCTCCTCGCCCAGAGCTTCATAAGGCGTTCGCGCAAGGTTACATAAATAGCGTGCTTTCACAGGTTTGGCGCATCGattacaaaacatcaaaaatcaaAGAGGAAGGAAGAAACCATCGGAAAGACGAATCCGTGGCCATCGGTAACGTAATTAGCAAACGTGTGGGTAATAGCCTCGCGTGATGATACAAAAGGAGAGATTCATTAAACACGTACGGTGAGATTGTAAAATAAACGTGatttctttaaat

Function

NR:

description
PREDICTED: uncharacterized protein LOC107698908

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235983.1 True 1597 mRNA 0.48 6 1465437 1469101

Neighbor

gene id symbol gene type direction distance location
rcan1b rcan1b,LOC107555267,LOC107698909,LOC107568778,LOC107653682,LOC107718018,LOC107709340 coding downstream 10366 1442791 ~ 1455071 (-)
LOC122350642 atp1a1a.4,LOC107717913,LOC107653679,LOC107555265,LOC108429865 coding downstream 52491 1404578 ~ 1412946 (-)
atp1a1a.1 atp1a1a.1,LOC107718011,LOC107555257,LOC107698904,LOC107653678,LOC107717912,LOC107568774 coding downstream 62613 1392929 ~ 1402824 (-)
LOC122350536 atp1a1a.2,atp1a1a.4,atp1a1a.3,LOC107698906,LOC107555259,LOC107717913,LOC107555265,LOC107653679 coding downstream 94450 1364542 ~ 1370987 (-)
LOC122350472 atp1a1a.3,atp1a1a.4,LOC107718012,LOC107698905,LOC107555258,LOC107717913,LOC107653679 coding downstream 111641 1347494 ~ 1353796 (-)
wu:fa56d06 LOC107555251,LOC107751082 coding upstream 136775 1605876 ~ 1612082 (-)
n6amt1 n6amt1,LOC107563652,LOC107727005,LOC107698915,LOC107689945,LOC107751077 coding upstream 493213 1962314 ~ 1968862 (-)
LOC122342174 adamts5,LOC107751075,LOC107593743 coding upstream 682550 2151651 ~ 2155943 (-)
jam2a LOC107751072,LOC107593737 coding upstream 754988 2224089 ~ 2235491 (-)
mrpl39 mrpl39 coding upstream 770037 2239138 ~ 2244571 (-)
G260 NA non-coding downstream 23925 1441088 ~ 1441512 (-)
G247 NA non-coding downstream 118648 1344298 ~ 1346789 (-)
G244 NA non-coding downstream 180628 1282838 ~ 1284809 (-)
LOC122347488 NA non-coding downstream 202234 1256189 ~ 1263203 (-)
G231 NA non-coding downstream 491468 973746 ~ 973969 (-)
G297 NA non-coding upstream 97937 1567038 ~ 1567532 (-)
G303 LOC107698893,LOC107555241,LOC107751081,LOC107653672,LOC107571885 non-coding upstream 111642 1580743 ~ 1582087 (-)
G304 NA non-coding upstream 114790 1583891 ~ 1584684 (-)
G347 NA non-coding upstream 314094 1783195 ~ 1784512 (-)
G358 NA non-coding upstream 397539 1866640 ~ 1867365 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 233790 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 717073 738137 ~ 748364 (-)
G67 NA other downstream 1029312 435808 ~ 436125 (-)
G20 NA other downstream 1278352 186420 ~ 187085 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other upstream 122968 1592069 ~ 1604984 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other upstream 1219664 2688765 ~ 2689464 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 1667407 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 2538739 4007840 ~ 4014287 (-)
G820 NA other upstream 2829209 4298310 ~ 4299193 (-)

Expression


Co-expression Network