LOC122344694 (LOC107723159,LOC107565429,LOC107723172,LOC107665982,LOC107758876,LOC107590752,LOC107692684)


Basic Information

Item Value
gene id LOC122344694
gene name LOC107723159,LOC107565429,LOC107723172,LOC107665982,LOC107758876,LOC107590752,LOC107692684
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7141333 ~ 7143853 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238247.1
atgtgataTGATATGCTGGTACTTGGAACTTGGAAGTCCCCCCGGTTAAGTTATATGTATCTCAGTCTACTCACTGAAAGAAGCCAGACAATCATGCTTCGCCTTCTGATCGTTTTAAGTTTCCTCAGAGGAGCTTATCTTTCAGATATTGTAGCACAAGGGAACACATCTGTGGAGTTCGGTCAGGATGCCTCGTTCTCTTGTACGCGGTCAGACGCGTCCGGCGTCAAACAGATCACCTGGCAGCGGGTGAGCGGCACGGAGCCGGTACAAACTCTGGCTACATACAGCGATCTCTACAAGGATCACGTGCACGAACAGTATGTCGGGAAAGTCACTTTCACGGCGGCGTCAGTTAATTCAACGTCCATCAAGATCAAACACGCAACGTTTGAAGACGAGGCTTGCTACATTTGTTCCTTTAAGGTGTATCCAATCCAACCTCAACGACAGACGCTGTGTCTCACTGTTAAAGGCGTATCAGAAATAACAGCGTCGGTGAATCCTGCGCCCAGTTCTGCTCCAGATGTTGTAGTCTCGTGTTCAGCGACTGGTAAACCAGCCCCAACTATCCTCTGGAAATCCGCAGGGAGAGAGTTGAACGATTTTCGGGAAAGTAATTTCACAACGCTCAACAAAGACAGTTCAACCACAGTTACGAGCAACCTCACTCTACCACTGTCACAGTTTCATGGGAAGTACGTGGAATGTGTGGCTCGGAGTGACGACACAGAGAAGAGCGATCAAATCTATGTGTCTGATAAAGATTATAAAGACAATGAAGTCACTTTAAGAAATTATATCATTCCAATTCTGGTCTTGATTGTCATCAGTATTCTCATCTTCGTCATCTATTGTCACTCCAAGGataaagatCAAAAATCTGCTTGCATGGTTTGAACTACTGTGCAGCTGTTactttatttagaatttatacatttttctgatGCTTCTTTTGTAAACTCGCTTCATGTTTACATTGGTGAATAAGCTAATTTTAGATAATAATATAGATGATATGTGTCCTCCGCAGTTTTTATATCCTGCATCTGCACTTTAAGTTTCTTTTAATCCGAAattctgcattatttattgatatgaGATTTGTTTAGGATTTTAGATAACTCTGTTACAGCTGGCTGTCTTTGATTAAATTGCTTATtatcattttagatttattgtGTTCAGATATTGTACTTGGAATGGAATAGATTTGTTATTGGttgcatttgttgttttgtgcGGATGTGTGTATACGAAACCTTTTGTAgtgcattttgtgtgtttttcaacaattttatatatatgtggaatatatattttctatactGTG

Function

NR:

description
PREDICTED: OX-2 membrane glycoprotein-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238247.1 True 1333 mRNA 0.40 5 7141333 7143853

Neighbor

gene id symbol gene type direction distance location
LOC122344706 LOC107565429,LOC107590752,LOC107692683 coding downstream 2853 7135760 ~ 7138480 (-)
zgc:174945 NA coding downstream 5725 7134391 ~ 7135608 (-)
cnpy3 tnrc5,LOC107758855,LOC107590778,LOC107723163,LOC107665936,LOC107565448,LOC107692718 coding downstream 71756 7065125 ~ 7069577 (-)
LOC122351948 LOC107758836,LOC107692686,LOC107723162,LOC107665933,LOC107565093,LOC107590751,LOC557811 coding downstream 122297 7008598 ~ 7019036 (-)
LOC122351719 fga,LOC107692636,LOC107714149,LOC107565125,LOC107714150,LOC107758872 coding downstream 295877 6839928 ~ 6845456 (-)
cfap221 cfap221,LOC107758838 coding upstream 43713 7187566 ~ 7196661 (-)
crfb15 LOC107692625,LOC107723179,LOC107758857 coding upstream 53680 7197533 ~ 7203087 (-)
knl1 casc5 coding upstream 156095 7299948 ~ 7311221 (-)
sdk1b sdk1b,LOC107692681,LOC107723157,LOC107665954,LOC107586817,LOC107758841,LOC107565061 coding upstream 174485 7318338 ~ 7485657 (-)
LOC122348313 LOC107557944,LOC107758859,LOC107577730,LOC107665949,LOC107576538 coding upstream 383232 7527085 ~ 7529413 (-)
G1553 NA non-coding downstream 137632 6982959 ~ 7003701 (-)
G1544 NA non-coding downstream 138345 6958686 ~ 7002988 (-)
G1532 NA non-coding downstream 281067 6859889 ~ 6860266 (-)
G1531 NA non-coding downstream 283272 6857795 ~ 6858061 (-)
G1529 NA non-coding downstream 285225 6855795 ~ 6856108 (-)
G1632 NA non-coding upstream 6432 7150285 ~ 7152480 (-)
LOC122341717 NA non-coding upstream 153641 7297494 ~ 7298145 (-)
G1660 knstrn,LOC107723170,LOC107564216,LOC107758858,LOC107586895 non-coding upstream 168399 7312252 ~ 7312898 (-)
G1663 NA non-coding upstream 172057 7315910 ~ 7316318 (-)
G1781 NA non-coding upstream 512225 7656078 ~ 7660532 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other downstream 7051 7071589 ~ 7134282 (-)
LOC122342514 NA other downstream 596775 6533501 ~ 6544558 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other downstream 673079 6456044 ~ 6468254 (-)
gng13a NA other downstream 812992 6327023 ~ 6328341 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other downstream 866582 6267663 ~ 6274751 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other upstream 60151 7204004 ~ 7295829 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other upstream 1348291 8492144 ~ 8500212 (-)
G1926 NA other upstream 1412187 8556040 ~ 8607795 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other upstream 1635359 8779212 ~ 8798355 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 3213328 10357181 ~ 10401686 (-)

Expression


Co-expression Network