LOC122345881 (prss23,LOC107570079)


Basic Information

Item Value
gene id LOC122345881
gene name prss23,LOC107570079
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2700490 ~ 2704267 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240380.1
acacacacacacacacacactcgctcctCTTCTGAGCGGAGAACCGACGAGAGCAGCCTGGCGATgatgagaagagaagagaagagatcCATGTCCTGAGACACTGATCCGCTCGGATCTTTACTGGAGTTTATTACCGGAAACACCTGCGCGCGCGAACAGGTTCTCTTATGGCTCTGCTCgccctgctgctgctgctgggctCAGTGTCGGCCTCGGCCCCGGGGCCCCAGTGGCCCCTCCAGCGTGTGCCTGTAGTTTGGCCCCAGCGGACGGAGCAGCGGCCAGCACCTCACTTCCTGGGGCCCGCTCAGCTGCAGCTCAGCTCTTCCTGTGGCCCCGAGTGTCACAAGCGGGCCCCTGCTCTCAGCTACTGGGACCTGCGGCAGTTCCTGTCCTATGAAACGCTGCACTCCAGTGGCCAGCTAACTGAGACGGAGGTGGCCATTTACGGCTTCGACCCCAGGTCCTTCTCCACGGGCCCCGCCGGTGGCTCCAGACATAAGCGGCAGATCTTCGGTCCGGACGGACGCTTCAGTATCGTGGGCCAGGACTTCCTCATGAACTATCCCTTCTCCACGGCTGTCAAGCTGTCCACCGGGTGCTCGGGGACCCTGGTGGGGGACCGGCACGTGCTCACGGCGGCTCACTGCATTCACGACGGAAAGAACTACGTCAAAGGAGCCCAGAGGCTGAGAGTGGGCTTTCTGAAGCCACGGCAAAAAGAGACGTCCAGCAGAAACGGCACTAGATCGGGCCAGATGAAGTTCCAGTGGATCCGAGTCAAGCGCACACACGTGCCCAAGGGCTGGATCACCAACACCGGTTCGGCCAACGACATCGGCATGGATTACGACTACGCTCTGCTGGAGCTGAAGAAGGCTCACAAGCGGAGGCACATGAAGCTGGGCATCAGCCCCGCGGTCAAGCAGCTGCCCGGGAAGCGGGTGCAGTTCTCGGGGTTTGACAATGACCGGCCGGGTCAGCTGGTGTACCGCTTCTGTGAGGCCGGGGACGAAACCTACGACCTCCTGTACCAGCGTTGTGATGCTCAGCCAGGGGCCAGTGGCTCCGGGGTCTACGCCCGCTTGTGGAGCCGCAGACGGCAGCGCTGGGAGCGCAAGGTCATCGGGATCTTCTCTGGACACCAGTGGGTGGACCTCGGCGGCACGCCTCAGGAGTTCAACGTCGCGGTGCGCATCACTCCGCTCAAATTCGCCCAGATCTGCTACTGGATCAAAGGAAACTACGTGGACTGCAGAGAAGGCTGAGCGCCTTGCTTTCTCTCCGTTAGCACTTAAGACTCAGAAGATTATTTCATGCAGGAAAGTTGCACAGCACAGAATATGCATCAGTAACTAATAAACTCCtaaattctttgttttaaactatttttttagtaGTCTACTTATAGATTACTTTGAGTCAAATCAGTACCAAATATACCTGCGAATGAATTTAAGTACTGCAAAGATTTTGCAACACTTTTGCCATAGTTTCTGGTTCATTTGCGAAGCtgattttacatttcagtctaGTGTGAGTCTGCGGGAACTTTCTTTTTCCTCCAGAAAGTGAAACGTGAAGTGCAAAAGGAAGAAACtattctttattttggattgtaaaacttttttctttttgcaaagtattataattttttttacaaaaagcacattttagtactttaacaCAATACTTTAATTTTCCTTTGCAAAACACGTGGCACTGATTTGACTCCACAACAAAAGTCTTAAGTAAGGTTCGCCTCTGGCAGTCTTTCTGTGGAAGCACAAATCATTATAATACAGTAGATGTTTAAGGCTGACATCAGCTCGGAGCTCTGGTATGTTTTCTCTCATGTACTGAAGTGTGAGGCGCTTGCGTGGAAACTACTGTAATACTGCTTCCCTCTAGTGAACAGAGACTGTTCTGCAGAggtccacacacaaacacactgtacATCAAACACATGAGCGGACATCAGCTGCCCATCTGCACTttgacatttattcatttaatggcACTAATCATTTGAAGAATTTAATGCCCTGTTATGCACAACACATTAAAAgcttttgcaaaaaataaaagcacctGCATGAAGAGCTCACATTAAACATATGGATGTGTGTGATAGTTTTTATAAAAGGCACAGCGCTTGTCGAAAACACGGTCAGCTCATACTTAACACAAACTTCGTAAGAAAACAGCTTATTTTTAAGGCACTTTGAAATTAAGCACCCCTCAAATTCTGATGAATGTAATATGAAAACCAAATAACATCATAACATTAAAAGAAATCTAACTGGTTTAa

Function

symbol description
prss23 Predicted to enable serine-type endopeptidase activity and serine-type exopeptidase activity. Acts upstream of or within atrioventricular valve development; endocardium morphogenesis; and regulation of Notch signaling pathway. Is expressed in atrioventricular canal; atrium; cardiac ventricle; and pectoral fin. Orthologous to human PRSS23 (serine protease 23).

NR:

description
PREDICTED: serine protease 23-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K09627 PRSS23; serine protease 23

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240380.1 True 2314 mRNA 0.50 3 2700490 2704267

Neighbor

gene id symbol gene type direction distance location
LOC122353060 LOC107570085,LOC107751087,LOC107711130,LOC107576869 coding downstream 72227 2604404 ~ 2628263 (-)
dusp27 dusp27 coding downstream 102601 2589647 ~ 2597889 (-)
pou2f1a pou2f1,LOC107751057,LOC107662118,LOC107654677 coding downstream 112232 2574742 ~ 2588258 (-)
LOC122351178 LOC107739159,LOC107694465,LOC107570071,LOC107751098,LOC108429813,LOC108258592 coding downstream 140151 2559530 ~ 2560339 (-)
f7l LOC107751062,LOC107694469,LOC107570084,LOC107551096,LOC107747071 coding downstream 155504 2540488 ~ 2544986 (-)
LOC122342272 LOC107751049 coding upstream 6450 2710717 ~ 2717844 (-)
hikeshi hikeshi,zgc:110091,LOC106574699 coding upstream 13720 2717987 ~ 2720143 (-)
eed eed,LOC107751659,LOC107662672 coding upstream 16388 2720655 ~ 2723920 (-)
nfkbiz LOC107751657,LOC107575617 coding upstream 22030 2726297 ~ 2732358 (-)
cep97 NA coding upstream 28579 2732846 ~ 2739589 (-)
G666 NA non-coding downstream 45658 2652717 ~ 2654832 (-)
G652 creg1,LOC107694464,LOC107751059,LOC107551109,LOC107739160,LOC107654633 non-coding downstream 136080 2562191 ~ 2564410 (-)
G653 creg1,LOC107751059,LOC107739160,LOC107654633,LOC107551109,LOC107694464 non-coding downstream 138524 2561355 ~ 2561966 (-)
G638 NA non-coding downstream 141626 2556243 ~ 2558864 (-)
LOC122351916 NA non-coding downstream 148229 2548924 ~ 2552261 (-)
G681 NA non-coding upstream 35960 2740227 ~ 2742428 (-)
LOC122351434 NA non-coding upstream 116921 2821188 ~ 2833731 (-)
G692 NA non-coding upstream 362544 3066811 ~ 3070069 (-)
G695 NA non-coding upstream 408003 3112270 ~ 3120797 (-)
G720 NA non-coding upstream 581689 3285956 ~ 3286209 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other downstream 11026 2688765 ~ 2689464 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other downstream 1095506 1592069 ~ 1604984 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 1468843 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 1952126 738137 ~ 748364 (-)
G67 NA other downstream 2264365 435808 ~ 436125 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 432241 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 1303573 4007840 ~ 4014287 (-)
G820 NA other upstream 1594043 4298310 ~ 4299193 (-)
mdh1b mdh1b other upstream 2251852 4956119 ~ 4960210 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other upstream 3139877 5844144 ~ 5853249 (-)

Expression


Co-expression Network