spry2 (spry2,LOC107549433,LOC107750630,LOC107674014,LOC107676062,LOC107750049,LOC107556294)


Basic Information

Item Value
gene id spry2
gene name spry2,LOC107549433,LOC107750630,LOC107674014,LOC107676062,LOC107750049,LOC107556294
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 4495194 ~ 4499239 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240733.1
CTGTTCACCCCCTTCACTTCCACATGACGCCATTTACAGCATAAACCCGACCTCCTCTccggaaagaagaaaaaacaagagCTGAAAAACTTGAAAGCAGCACAGTGTGTGCCATGCAGCCAAACATTCAACTCGCGAACCGCAACCCGTCTTCTTGAAAAAGTCTTGAGGGCTttcatttgccattttttttcagtaaactcCGCTCATTTTGTTGGATTCTGgaacttattttcttttttttttgccataattaGCGGTTTAACGGCATAAGTTGAACTACGCTGCGTTCTGCTTGGAATAAAACTCTGATGTTACCGTTTCGCGCGAGTCGCGCGGAAAAATACGCGAATAGGAGGACGCGCGGGTGTTCGCTATCGTCGGGatttttgtgaatgaatctCCCAATGAACTGAGGACTAACCAAAGAGAAATTCCTACTAGTAGGATATACTCTTCACAACACAAATAGGGGGTTGAGGTGGTGAGATCACGGACTTCAGATGTGTTCAATGCCAGCCGGAGAGTTCCCACTTCAGAGTAAAGATGGAGACAAGAGCTCAAAATGGCGGCAGCGGCTCCTCTGGCTTGCTGCGAGCTTTGCGTGACACTGGCAGACCCCAGACTGGGGACTCGGAGCCTTGGGAGGGCCAGGTGCTCTCCCTGGACCAGATAAGGACCATCCGCAGCAGCAATGAGTACACGGAGGGCCCGACGGTGGCGCCCCGTCCACCGGCCTCCCAGCAGAAAACGGACTCGCAGTCTTCTAGCCCGACTTCCACTGCTTCCATTGAGCTATCCGAGCATAGAAACTCCCCGAGGGCCCAGCGAGCTGGTCAGCAGACTCCTCAGCAAGCCCCTCAGTCGCCAAGGAGTGGCGTGAGCAGATCCACCAGTGGTACCAGCGACGGGTCACGCAGCACAGCCAGGGCCAGCACAGGCAGCACCTCGTCGGAGCAAAGACTTTTGGGAAACGCAGGCGGGACGGCCGAGCGGGTGGTGAGGGCGCAACCTAAACGTTCAGAGCTGAAGCAGGAGGAACTGAAGCCCTTGGCCACGACTCTGGGCCAGGCTGCCGATGGCAAGCACTCAAACCGCTGCGAGGACTGCGGCCGATGCAAGTGCGAAGGGTGCACCTGCCCTCGGACCCTGCCGTCCTGTTGGATGTGCGGGCGCAGGTGCGTTTGCTCGGCTACAACAGCGATGGACTACGTCACCTGCGTCTGCTGCGTCAAGGGCCTCTTTTACCACTGCTCCAGCGACGATGAGGACGTGTGCGCGGACAAGCCCTTCTCGTGCACCCAGTCGCACTGCTGCATGCGGTGGACGGCCATAAGCGTCCTGGCACTTTTCCTGCCCTGCCTGCTTTGCTACCTCCCGGCGAAGGGCTGCGTGGCGTTGTGCCAGGCGTGCTACGACTGCACCAGTCGGCCAGGATGCCGCTGCAAGAACAAAGGAGTTGAGAAATAAACAAGGCTCGGTTCCTGGAGTAGCACTGGGAAGATAACCTTATCTGGGACTATCTCCAGAGCAGTGGGAAAATATTCGCAAATTGTTGTAGTTTTGGCACTGTAGACCAAGAGGTGACATTGGATTGGCAAAAACTGGTTTGaagtggtttgtttgtttgtttgttttttgcttttctctcatccactttctctctttctctttcactctttAACGGGGATAGAGTTTGTCGCGACATCCTTCCCCCGTCCTTCTCGTTTTAAACTGAAGTCCAGAATGTTAGCCCTATTGACATTCAGTAATATGACTGATAAAGGTGACAGACTCTTCTAACTAACTGTTTGTGAATAGTATCTGCAAAGTATGTAAATTAGCAAATGAGCTCTTTTTCtgagagattttatttttgtacatataaTATTTCAACTGTGAAAAGCATTGTGCCAAACCGGAGGCACCTTGACAGATCCATATATATGATGCATATATAAAACGTGTATAGTGCTGTACATTCGTTTCGAATGTATATCAATCACTCTTTTGATATTTTGCCTTATAGAAGAGAAACCTTACATGAATTATCCCTACAACTATACTTGTAAATTGTACAGTGACCCTaagaaaaactttattttctaatttcaACACATTgtttagtgtaaaaatatttatttgaagttttattattttataaagtaatatttattttgagaagCATCTTTATAGGCATCACCCCAACTTTGAGAAACAAAACCTCCTCTGTTGTTGCTGCAAAACAAGGGTGACAAGGGTGTCAAATCTGATGCATATGTTCactataaaatagaaaatatattaacgttttgaaattaaa

Function

symbol description
spry2 Acts upstream of or within blood vessel development; dorsal/ventral pattern formation; and negative regulation of fibroblast growth factor receptor signaling pathway. Predicted to be located in cytoplasm and membrane. Predicted to be active in cytosol. Is expressed in several structures, including brain; forerunner cell group; hindbrain neural keel; midbrain hindbrain boundary neural keel; and sensory system. Human ortholog(s) of this gene implicated in IgA glomerulonephritis. Orthologous to human SPRY2 (sprouty RTK signaling antagonist 2).

NR:

description
PREDICTED: protein sprouty homolog 2

GO:

id name namespace
GO:0001525 angiogenesis biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0040037 negative regulation of fibroblast growth factor receptor signaling pathway biological_process
GO:0060841 venous blood vessel development biological_process
GO:0016020 membrane cellular_component

KEGG:

id description
K17383 SPRY2; protein sprouty homolog 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240733.1 True 2323 mRNA 0.48 2 4495194 4499239

Neighbor

gene id symbol gene type direction distance location
LOC122342374 erbb4a,LOC107674013,LOC107725343,LOC107556266,LOC108440448,LOC107557316,LOC107707608 coding upstream 262691 4221283 ~ 4232503 (+)
LOC122352357 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 coding upstream 483824 4007775 ~ 4011370 (+)
slitrk6 slitrk6,LOC107674010,LOC107558904,LOC107730399,LOC107574216,LOC107737039,LOC107698122 coding upstream 677198 3804599 ~ 3817996 (+)
LOC122350229 gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC108414264,LOC100710496 coding upstream 1374374 2941770 ~ 3120820 (+)
LOC122328837 gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC103365236 coding upstream 1713010 2758083 ~ 2782184 (+)
tuba8l2 tuba8l2,LOC107750365,LOC107556293,LOC103042625,LOC108411703,LOC107549435 coding downstream 49213 4548452 ~ 4554686 (+)
stk16 stk16,LOC107674016,LOC107750290,LOC107676064 coding downstream 56266 4555505 ~ 4561710 (+)
atic atic,LOC107556291,LOC107750210,LOC107674004,LOC107549437,LOC107750055,LOC107676052 coding downstream 90792 4590031 ~ 4597077 (+)
LOC122346000 cpo,LOC107556274,LOC108440461,LOC108258336 coding downstream 145695 4644934 ~ 4649367 (+)
LOC122346016 cpo,LOC107556274,LOC108440461 coding downstream 153393 4652632 ~ 4657892 (+)
G815 NA non-coding upstream 195996 4294053 ~ 4299198 (+)
LOC122346159 LOC107557315,LOC107705456,LOC107725343,LOC107707608,LOC107674013,LOC107667809,LOC107556266 non-coding upstream 273906 4219242 ~ 4221288 (+)
LOC122346127 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 non-coding upstream 276594 4209409 ~ 4218600 (+)
LOC122341420 NA non-coding upstream 470856 4020097 ~ 4024338 (+)
G771 NA non-coding upstream 774655 3720264 ~ 3720539 (+)
G856 NA non-coding downstream 3002 4502241 ~ 4502477 (+)
G857 NA non-coding downstream 4293 4503532 ~ 4503821 (+)
G852 NA non-coding downstream 41751 4540990 ~ 4542948 (+)
G843 NA non-coding downstream 76905 4576144 ~ 4599814 (+)
G847 LOC107749885,LOC107750053,LOC107676051 non-coding downstream 109292 4608531 ~ 4609874 (+)
G826 NA other upstream 136898 4358007 ~ 4358296 (+)
G824 NA other upstream 137934 4356698 ~ 4357260 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other upstream 796101 3636707 ~ 3699093 (+)
G727 NA other upstream 1154318 3334658 ~ 3340876 (+)
G482 dusp27 other upstream 1898892 2594931 ~ 2596302 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 438942 4938181 ~ 4944841 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other downstream 467947 4967186 ~ 4977263 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other downstream 479886 4979125 ~ 5025914 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other downstream 1380221 5879460 ~ 5881134 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other downstream 1558165 6057404 ~ 6087655 (+)

Expression


Co-expression Network