arl11 (arl11,LOC107676843,LOC107746302,LOC107560992,LOC107603040,LOC107718406)


Basic Information

Item Value
gene id arl11
gene name arl11,LOC107676843,LOC107746302,LOC107560992,LOC107603040,LOC107718406
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22710993 ~ 22711961 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241279.1
AACCCGTTTAAAAATGTGGATTAACCAGTCGAGCTGAATCCCACGGTCAGTCCTGAGCTATagtttgaaaaagaaacagaagtcGCTTAGCGAAATCAGGTGCTAGTTCAAACCTGACGAGACACAGACAACAAGAGTCCGCAAGTTCAATCGGAAACGCGTCTCTCGCATCAAGATGGGCGTCGTTAAGTCTAAACAGTTTAAAAAGACTCCACTGGTTCTCCTCATGGGTTTGGACTCAGCTGGGAAATCTACTTTGCTGTACAGACAGCAGCGTGGTGTGGTGATGGAGACCTCTCCCACTGTGGGCTTCAACGTTGCAACTGTAGAGCTGGACAAGAAGACCTCGCTCTCCGTGTGGGATGTTGGGGGACAGGGAACCATGAGGCCCAATTGGAAATACTATTTCGAGGGATGTAAGGTGCTGGTCTTCGTGGTGGACAGCAGTGATCGTGCCAGGTTGGGAGAAGCCCAGACAGCCCTGAGGAAGATTCTGAGTCATGAGCATTTGAGAGGAGTTCCCCTGCTGGTGCTGGCTAACAAAAAAGATCTGCCAAACTCTCTGACTATTAGAGAGGTGTCTTCATCGCTGGACCTGGATAGTTACACAGACCGGGTGTGGGAAATCCAAGCCTGCAGCGCCCTGAAGGGACTGGGTCTCCAACAAGCCTTTCTCTCTATAGATAAACTAATGCATAAAGCATAAGCAAGATACTAAATGGCTAACCAGGCAATACATAGAATGTCTCCTTTTATTGAAGCGTAAACTTACTAACAATCAAAATGAAGAGGCATAGCGCCAAGAGCAAGAATGTTGAGAAATAATGCACTGAATGAACTGCTGCACTTGTTTATTGTTCTTGTGTGTGCTGTAAATATTACGTGTTACTCGTCTTCCTGTGCTGCACTTAGCGTATGCACTGTAGTTATTGCAAACATCTTTTCCcttgtaaataaatgactattttG

Function

symbol description
arl11 Predicted to enable GTP binding activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human ARL11 (ADP ribosylation factor like GTPase 11).

NR:

description
PREDICTED: ADP-ribosylation factor-like protein 11

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07959 ARL11; ADP-ribosylation factor-like protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241279.1 True 969 mRNA 0.46 1 22710993 22711961

Neighbor

gene id symbol gene type direction distance location
cab39l cab39l,LOC107676861,LOC107718429 coding upstream 15252 22685839 ~ 22695741 (+)
mcf2la mcf2l,mcf2la,LOC107676858,LOC107692131 coding upstream 26375 22623552 ~ 22684618 (+)
tubgcp3 tubgcp3,LOC107692132,LOC107746265,LOC107718870 coding upstream 89742 22603737 ~ 22621251 (+)
sox1b sox1b,sox1a,LOC107746263,LOC107567792,LOC107676867,LOC107692134,LOC107718482,LOC107603037 coding upstream 192383 22515466 ~ 22518610 (+)
arhgef7b arhgef7b,LOC107567796,LOC107676887,LOC107718510,LOC107692139,LOC107746262 coding upstream 262690 22426984 ~ 22448303 (+)
cryzl1 cryzl1,LOC107560977,LOC107603049 coding downstream 190795 22902756 ~ 22909636 (+)
cbr1 cbr1,LOC107746284,LOC107560976,LOC107692178,LOC108428204 coding downstream 201679 22913640 ~ 22916406 (+)
morc3b LOC107603048,LOC107692193,LOC107746056 coding downstream 204584 22916545 ~ 22925622 (+)
bcl9 bcl9,LOC107746285,LOC107676875,LOC107566537,LOC107746055,LOC107692115,LOC107603052 coding downstream 223908 22935869 ~ 23020832 (+)
gja8b cx44.1,LOC107566539,LOC107746070,LOC107746288,LOC107603011,LOC107692191 coding downstream 325883 23037844 ~ 23039022 (+)
G5206 NA non-coding upstream 171521 22539270 ~ 22539472 (+)
LOC122350977 NA non-coding upstream 180505 22526122 ~ 22530488 (+)
G5178 NA non-coding upstream 323465 22385266 ~ 22387528 (+)
G5159 NA non-coding upstream 475464 22232347 ~ 22235529 (+)
G5134 ddx39aa,LOC107712218,LOC107676896,LOC107603018,LOC107692155,LOC107551870 non-coding upstream 640859 22068067 ~ 22070134 (+)
G5223 NA non-coding downstream 3575 22715536 ~ 22733117 (+)
LOC122346574 NA non-coding downstream 23473 22735434 ~ 22741631 (+)
LOC122331092 NA non-coding downstream 40525 22752486 ~ 22757654 (+)
G5264 NA non-coding downstream 95689 22807650 ~ 22809030 (+)
G5289 NA non-coding downstream 152873 22864834 ~ 22865790 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other upstream 1075941 21632215 ~ 21635052 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other upstream 1090401 21590877 ~ 21620592 (+)
LOC122348864 ctnna2,LOC107706127 other upstream 1349553 21321462 ~ 21361440 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other upstream 2467644 20241818 ~ 20243349 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other upstream 2565137 20142461 ~ 20145856 (+)
LOC122348949 LOC107676845,LOC107560973,LOC107718848,LOC107692180,LOC107603005,LOC107746297,LOC107735984 other downstream 128727 22840688 ~ 22851393 (+)
G5559 epc1a,LOC107568137,LOC107654560,LOC107753261,LOC107653121,LOC107582192,LOC107706605 other downstream 831103 23543064 ~ 23554625 (+)
G5649 LOC107676039,LOC107729348,LOC107594453,LOC107578077,LOC107729349,LOC107676194,LOC107706808 other downstream 1571521 24283482 ~ 24293329 (+)
hadh hadh,LOC107594428,LOC107729339 other downstream 1844836 24556797 ~ 24558929 (+)
G5817 NA other downstream 1991887 24703848 ~ 24704319 (+)

Expression


Co-expression Network