gaa2 (si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495)


Basic Information

Item Value
gene id gaa2
gene name si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6456044 ~ 6468254 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241672.1
CGAATCTGATTCTAATTGCAACTGTAGGACACACGCAACAACACTAACTTCATAACACATGAAACGCCGCTGATGTTTACAAAAGAGCGTACATCGGAGGATATTCATTGATGAGATGTAGCGCGTGAAACACTACAACTGTTGAAAATCCCGCCCGCGTAAAAATTTGAAATGGTGTCTTACAAGAGACTCACGCCTGAGGAGGTTCATTTCTCAGGAGCCGCTTTATTGGATCCTGATGAGTCCACAGATACAGATCTAAAGGAAGTAAACCCAGAACTGCCCCTGCTGCCCCAAAACCATCGCTGCTCCATCACCGTTGCCCTGCTGACCCTTGGGGGACTTATTGTAGTTCTCTCTAGCATCTGGCTGCTTGGAACTATATTTTGGTTGCATAAGCCATTCTCCACAGAACCCCATAGACCCCCTCCACCTGCTGTAGCTAAACGCCCTAACGAGACGTGGCTGCAGCCGGAGTCCTGCTCGCAGATCCCAGAAGCTTGGAGGTTCGACTGTTATCCAGAGAGAGGTGTGGTGGTGACGGAGGACATGTGCCACGCTCGAAACTGCTGCTTCATACAGCGCTCACAGGCCAAGACATCGGGACGGGGTGGAGTGCCGTGGTGTTTCTACGCGCTTGACTATCCATCCTACGAGTTGGTGTCCATTACTGACACAGAGATGGGGAAGGTGGGAAAACTGCTCCGGAACAAAAAGACGTATTATCCTAAAGACATAGATGCACTGCAGATGGAGGTGATGTATGAGGAAGACAACAGACTGCGTGTGAGGATAACAGACCCGGCCGAAAAGAGGTATGAGGTGCCTATAGATGTTCCTGTGGTTGAGAAAAAAGCATCAAATCCCTCTTACACCGTAGAATTCATCAAAGAACCTTTTGGGCTGATTGTCAAGAGAACACAGACAGGAACTGTACTGTTGAATACATCCATAGCTCCTCTCTTCTTCGCGGATCAGTTCCTGCAGATGTCTACATCATTACCTTCCCGTTTCATTTATGGACTGGGTGAACATCGCTCCAACTTTCTGCACGACCTCCAGTGGAACACCCTCACCATGTGGGCTCGAGATGTCCCGCCAATGGAGCTGACCAACCTCTATGGCGTCCATCCCTTTTATCTTTCTATGGAAACAGATGGAATGGCACATGGGTTTTTCATGCTCAACAGCAATGCAATGGATGTGGCTCTGCAACCTGCTCCTGCCCTCACCTGGCGTATGATTGGTGGGATCCTCGACTTTTACATTTTCCTAGGCCCGGATCCCAGCTCTGTGATTGCACAGTATTTGGATGTTGTAGGGAAGCCTGCAATGCCCATCTTCTGGGCTCTGGGCTATCATCTTTGCAGGTGGGGCTACAAGTCAAGCGACAAAACCTGGAATGTTGTAAAAGAAATGCGAAATTATGGGATACCTCAGgaTGTTCAGTGGAATGACATTGACTACATGGATAATGCCTTAGACTTCACTTACGACACTGTGAACTTTTCCAGCCTTCCTGACCTTGTGAAAGACCTTCATAGACATGATCAGCATTACGTCATGATCTTGGATCCTGGTATCAGTAACTCTCAGCTGCCTGGCTCTTACTGGCCATTTGATGAGGGGATGAAGAGAGGCATCTTCATCAATGATTCGAATGGAGACGTCCTAATCGGGAAGgTCTGGCCAGGACTCACAGCATTTCCAGATTTCTCCGATCCAGATACACACGAATGGTGGTACCAGAATCTGAAGCGTTTCCATGAAAAAGTGCCTTTTGATGGCGTGTGGATTGACATGAATGAGCCATCTAATTTCTTTGATGGATCACTGAATGGTTGCCCAGACAATGAACTGGAAAATCCTCCCTACACTCCAGGTATTCTGGGTGGTACATTAAAGGCCAAGACTGTGTGTGCATCTGCACGTCAGAAAATCTCCACTCACTACAACATACACAGTCTGTATGGACTCATGGAAGCTAAGGCTACTGAAAGtgCTTTGAGGAAGATCACAGATAAGCGCCCCTTCGTCATTTCCCGCTCTACGTTTCCCAGTCAGGGCAAGTATTCGGGCCACTGGCTCGGAGACAACAGGAGCCAATGGAAAGATCTGGCCACATCCATACCagGTATGCTGACATTTAACATCCTTGGCATTCCTCTCATTGGGGCTGACATCTGTGGCTTTGGGGGCAGCACTACAGAAGAACTGTGCGTCCGATGGACCCAGCTCGGAGCTTTCTACCCCTTTTCAAGAAATCACAACTCCATAGATGAGCAGAATCAGGAACCAACTGCATTCAGCCCTGCAGCTCGTATAGCAATGAAAGAAGCCATTCTCCTGCGTTATTCTCTGTTCCCACATCTCTACACACTCTTCCATCACGCACACAGCAGTGGACACACAGTCGCCACACCACTGCTCTTTCAGTTCCCAAACGATGAGAAGACGTATGGAATAGATAAACAGTTCCTGTGGGGAAAGAGTTTGCTGGTCACACCGGTTTTAGAGGCAGGGCGAGATTATGTTGTGGGATATTTCCCTAAAGGCCTCTGGTACGATTTCCACACTGGTGACTCATTGGTAAGCAGTGGAGAAGAGATCAATCTTAAGGCACCGACAGACAAAATCAACCTGCATCTCAGAGAGGGTTCAGTCATACCTACACAGAGACCTAACACGACCCTGTGGGTGAGCAGCGGTCAACCTCTTCATCTGATTGTGAGTCTAAGTGAGGACGGCCTGGCGAACGGTGATTTATTTTGGGATGATGGAGAGACCCTCGACACATATGAGAAAGATCAATACGCTTACATCTACTTCGCAGTAGAACAGaacacaatgaCATCCGAGGTGCTGCATAATCAAGAGGAGGCTACTTACATCACAGTGGAGACCGTTTCGTTTTATGGAGTGAAGGCCAAGCCAGAAAACGTAACCGTGAATTCACAAGAGGCAGCGTTCACTTACCGCAACAATCAGGTGCTGACAGTAACAGACTTGGGTCTGAATCTCAGTCATAACTTCACAATCAGCTGGATGTAAATGTGAAAGTcatcagtaatattttaaaatcgcGAGTTGCTGCAGAAATCACGACCATATCATCTCAAATGACTTTATCTTAGTACTTGGACAGTGGTGGTTCTGGTCCTGAAATCAAATATAAACCAGTAAGCATATGACAGATTATTGATTGTATGTTGTTGAATGTCTGTATTATTGACCCAGTAGCGGTCAGTTGCACTCAGATGGAGCAAAACCGAAGGGAAAACCTGTGTATTTTGatgaaatgtatttgtttgatcTGTTGAGTAGATAGATATTTTTACCTCTGCTGTTATATTACTGCCTGTTGTTGCTGATATCGTTTCTGTAGAGCAGAAAAATTCAAGCATTTTAGTGGTGAATAAAgcttcttattttaaattagatttacaCCTTGCCATGCCATCGAAACCTAGGCAAGTATGAGATGATTCTGTGGTAAAAGCAAACAACATCGATACAGAAAAAACGATAACCACTACAAGTTCAAAAGCGATCCTGCTGAACTTGCAGCCTTTCACATTCTTACAAATTAAGTTGATCGGTGTGATGTTGAtttgcatatgtgtatatatcgTTTACAAGCGTGTTTGCACAGTTAAGGACATTCTGATGCTGCAGAAATGCATGTTAGAGCTTTAGTTAGCAAACATCGTTTCCGTGCACGGGCAGGCATGTAACTAAAATGATGCAGTGTGTTCAGCCTATCCAAATGTGATAGAAactctttttcttcttatgattcatttgttttaatgccCAAAGCAAGTCGTTATAAAATGTACAACCATGACAACATTACAGAAGTAAATCACTGTACAGCATTCATCAAGGCTTAAAGAGGCATCGTCGTGCATTATTTTGTCAATTGCTACCACATGCTGTCGATATTACCATTTATAACGTAACATCGTGCCTTATATTTCATCTAAGCTGTGATTTAAACATTCAGTGGCTTTACTGTGAATGTATAATACCCTTTGTTCGAAACACTGGGCTGCTTTACAAATTTTATCAAATGTAATGAAGAAATTCTAATGTATAGAACTGTGATCCTAAAATTGAAGCTAAACAATATATCTACACCAATacgagctgttttttttccttgaaatGACCCTGAACAAACTGCTGTACAGCCATTCGCGAGACTTACAGGGTAGTGTGCAATAAAAATTCAAAGTGTT
>XR_006251174.1
AAAACGAATCTGATTCTAATTGCAACTGTAGGACACACGCAACAACACTAACTTCATAACACATGAAACGCCGCTGATGTTTACAAAAGAGCGTACATCGGAGGATATTCATTGATGAGATGTAGCGCGTGAAACACTACAACTGTTGAAAATCCCGCCCGCGTAAAAATTTGAAATGGTGTCTTACAAGAGACTCACGCCTGAGGAGGTTCATTTCTCAGGAGCCGCTTTATTGGATCCTGATGAGTCCACAGATACAGATCTAAAGGAAGTAAACCCAGAACTGCCCCTGCTGCCCCAAAACCATCGCTGCTCCATCACCGTTGCCCTGCTGACCCTTGGGGGACTTATTGTAGTTCTCTCTAGCATCTGGCTGCTTGGAACTATATTTTGGTTGCATAAGCCATTCTCCACAGAACCCCATAGACCCCCTCCACCTGCTGTAGCTAAACGCCCTAACGAGACGTGGCTGCAGCCGGAGTCCTGCTCGCAGATCCCAGAAGCTTGGAGGTTCGACTGTTATCCAGAGAGAGGTGTGGTGGTGACGGAGGACATGTGCCACGCTCGAAACTGCTGCTTCATACAGCGCTCACAGGCCAAGACATCGGGACGGGGTGGAGTGCCGTGGTGTTTCTACGCGCTTGACTATCCATCCTACGAGTTGGTGTCCATTACTGACACAGAGATGGGGAAGGTGGGAAAACTGCTCCGGAACAAAAAGACGTATTATCCTAAAGACATAGATGCACTGCAGATGGAGGTGATGTATGAGGAAGACAACAGACTGCGTGTGAGGATAACAGACCCGGCCGAAAAGAGGTATGAGGTGCCTATAGATGTTCCTGTGGTTGAGAAAAAAGCATCAAATCCCTCTTACACCGTAGAATTCATCAAAGAACCTTTTGGGCTGATTGTCAAGAGAACACAGACAGGAACTGTACTGTTGAATACATCCATAGCTCCTCTCTTCTTCGCGGATCAGTTCCTGCAGATGTCTACATCATTACCTTCCCGTTTCATTTATGGACTGGGTGAACATCGCTCCAACTTTCTGCACGACCTCCAGTGGAACACCCTCACCATGTGGGCTCGAGATGTCCCGCCAATGGAGCTGACCAACCTCTATGGCGTCCATCCCTTTTATCTTTCTATGGAAACAGATGGAATGGCACATGGGTTTTTCATGCTCAACAGCAATGCAATGGATGTGGCTCTGCAACCTGCTCCTGCCCTCACCTGGCGTATGATTGGTGGGATCCTCGACTTTTACATTTTCCTAGGCCCGGATCCCAGCTCTGTGATTGCACAGTATTTGGATGTTGTAGGGAAGCCTGCAATGCCCATCTTCTGGGCTCTGGGCTATCATCTTTGCAGGTGGGGCTACAAGTCAAGCGACAAAACCTGGAATGTTGTAAAAGAAATGCGAAATTATGGGATACCTCAGgaTGTTCAGTGGAATGACATTGACTACATGGATAATGCCTTAGACTTCACTTACGACACTGTGAACTTTTCCAGCCTTCCTGACCTTGTGAAAGACCTTCATAGACATGATCAGCATTACGTCATGATCTTGGATCCTGGTATCAGTAACTCTCAGCTGCCTGGCTCTTACTGGCCATTTGATGAGGGGATGAAGAGAGGCATCTTCATCAATGATTCGAATGGAGACGTCCTAATCGGGAAGgTCTGGCCAGGACTCACAGCATTTCCAGATTTCTCCGATCCAGATACACACGAATGGTGGTACCAGAATCTGAAGCGTTTCCATGAAAAAGTGCCTTTTGATGGCGTGTGGATTGACATGAATGAGCCATCTAATTTCTTTGATGGATCACTGAATGGTTGCCCAGACAATGAACTGGAAAATCCTCCCTACACTCCAGGTATTCTGGGTGGTACATTAAAGGCCAAGACTGTGTGTGCATCTGCACGTCAGAAAATCTCCACTCACTACAACATACACAGTCTGTATGGACTCATGGAAGCTAAGGCTACTGAAAGtgCTTTGAGGAAGATCACAGATAAGCGCCCCTTCGTCATTTCCCGCTCTACGTTTCCCAGTCAGGGCAAGTATTCGGGCCACTGGCTCGGAGACAACAGGAGCCAATGGAAAGATCTGGCCACATCCATACCagGTATGCTGACATTTAACATCCTTGGCATTCCTCTCATTGGGGCTGACATCTGTGGCTTTGGGGGCAGCACTACAGAAGAACTGTGCGTCCGATGGACCCAGCTCGGAGCTTTCTACCCCTTTTCAAGAAATCACAACTCCATAGATGAGCAGAATCAGGAACCAACTGCATTCAGCCCTGCAGCTCGTATAGCAATGAAAGAAGCCATTCTCCTGCGTTATTCTCTGTTCCCACATCTCTACACACTCTTCCATCACGCACACAGCAGTGGACACACAGTCGCCACACCACTGCTCTTTCAGTTCCCAAACGATGAGAAGACGTATGGAATAGATAAACAGTTCCTGTGGGGAAAGAGTTTGCTGGTCACACCGGTTTTAGAGGCAGGGCGAGATTATGTTGTGGGATATTTCCCTAAAGGCCTCTGGGTGACTCATTGGTAAGCAGTGGAGAAGAGATCAATCTTAAGGCACCGACAGACAAAATCAACCTGCATCTCAGAGAGGGTTCAGTCATACCTACACAGAGACCTAACACGACCCTGTGGGTGAGCAGCGGTCAACCTCTTCATCTGATTGTGAGTCTAAGTGAGGACGGCCTGGCGAACGGTGATTTATTTTGGGATGATGGAGAGACCCTCGACACATATGAGAAAGATCAATACGCT

Function

NR:

description
PREDICTED: lysosomal alpha-glucosidase-like

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds molecular_function
GO:0030246 carbohydrate binding molecular_function

KEGG:

id description
K01187 malZ; alpha-glucosidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241672.1 True 4241 mRNA 0.45 20 6456044 6468250
XR_006251174.1 False 2805 transcript 0.48 18 6458051 6468254

Neighbor

gene id symbol gene type direction distance location
micall2b LOC107564427,LOC107702520,LOC107590718,LOC107722924,LOC107692650,LOC107725362 coding downstream 3402 6439035 ~ 6452642 (-)
ubn1 LOC107692651,LOC107702522,LOC107725361,LOC107722945,LOC107590714 coding downstream 105543 6339847 ~ 6350501 (-)
zgc:136472 zgc:136472,LOC107692654,LOC107702524,LOC107572430,LOC107722945,LOC107590714 coding downstream 117725 6333937 ~ 6338319 (-)
LOC122342505 LOC107565181 coding downstream 125517 6329661 ~ 6330527 (-)
ern2 ern2,LOC107702527,LOC107722925,LOC107590742 coding downstream 143271 6299916 ~ 6312773 (-)
LOC122347228 NA coding upstream 77707 6545961 ~ 6547468 (-)
LOC122346971 ugt5b3,ugt5b4,LOC107564400,LOC107692647,LOC107714140 coding upstream 111950 6580204 ~ 6593716 (-)
LOC122346986 ugt5b1,LOC107692647,LOC107714140,LOC107564400 coding upstream 120803 6589057 ~ 6593789 (-)
LOC122346519 mad1l1,LOC107564387,LOC107722950,LOC107590744,LOC107714125 coding upstream 246491 6714745 ~ 6761771 (-)
c1h7orf26 LOC107714132,LOC107722952,LOC107663321,LOC107692723,LOC107565504 coding upstream 297808 6766062 ~ 6770577 (-)
G1398 NA non-coding downstream 42463 6413382 ~ 6413581 (-)
G1394 NA non-coding downstream 66407 6389420 ~ 6389637 (-)
G1288 NA non-coding downstream 237455 6218244 ~ 6218589 (-)
G1282 NA non-coding downstream 241497 6213641 ~ 6214547 (-)
G1263 NA non-coding downstream 366641 6089023 ~ 6089403 (-)
LOC122347249 NA non-coding upstream 19390 6487644 ~ 6490193 (-)
G1499 fgb,LOC107665922,LOC107692638,LOC107714148,LOC107564337 non-coding upstream 314159 6782413 ~ 6839409 (-)
G1519 NA non-coding upstream 334040 6802294 ~ 6802755 (-)
G1528 NA non-coding upstream 385820 6854074 ~ 6854374 (-)
G1529 NA non-coding upstream 387541 6855795 ~ 6856108 (-)
gng13a NA other downstream 127703 6327023 ~ 6328341 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other downstream 181293 6267663 ~ 6274751 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other downstream 229930 6220604 ~ 6226114 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other downstream 342521 6111463 ~ 6113523 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other downstream 602795 5844144 ~ 5853249 (-)
LOC122342514 NA other upstream 65247 6533501 ~ 6544558 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other upstream 603335 7071589 ~ 7134282 (-)
G1642 NA other upstream 657388 7125642 ~ 7170022 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other upstream 735750 7204004 ~ 7295829 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other upstream 2023890 8492144 ~ 8500212 (-)

Expression


Co-expression Network