ern2 (ern2,LOC107702527,LOC107722925,LOC107590742)


Basic Information

Item Value
gene id ern2
gene name ern2,LOC107702527,LOC107722925,LOC107590742
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6299916 ~ 6312773 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241694.1
GAGTGACATCACCAGTTCCGTCCCAACGCGGAAATGTgcaatatttgttattataatataggGTCAGTTGTCTGGCACGTTACAGACATATACTGAACCGTAGCAGTACTGTAAGCGATTGAGCATGCCGCTGTGAAGTTTTTCCAGTGCTTTGTGATAATGGCGTTTTGTTGGAGGAGTTTGGAGCCCTTTCGACCTTAGCGTATATTTACTGACACGGACCTAGAACACGCCGCAACTTTAACCGCAGACAGACCTGTCAGATTCAAGGAGAAACTATGGACCGGAgacatttgctgctgctgctgttgcttaGCTTGGCTGGAAACGTGTCACAGTGTGAGGGAGGAAGTTCAGTCTCTCTCCCAGAATCGCTGCTCTTTGTTTCAACACTGGATGGAAGTCTGCATGCCGTCAGTAAACAGACAGGAGACATCAAATGGACCCTAAAGGAAGATCCCATCATACAGGTTCCTACTTACTTCCAAGAGCCAGGCTTTTTACCGGATCCCAATGATGGCAGTCTGTATGTGCTTGGGGGCAAACGCAAAGAGGGTCTGATGAAACTCCCGTTCACTATTCCAGAGCTGGTCCAGTCTTCTCCCTGCAGGAGCTCCGATGGTGTGCTCTACACGGGTAAAAAACAGGACACTTGGTTTGTGGTTGATCCTCAGACAGGTGAAAAACAGACAAGTCTGAGCACCTCCTCTTCAGACTCTATTTGCCCTTCTGCCCCTCTGCTGTACATTGGTCGCACAGAATATATGATCACCATGTATGACACGAAGACTCAGGAACTCCGCTGGAACGCCACCTACAACGACTACTCCGCGCCTCTTTATgatgacaaaaaatatgaatataAGATGTCACACTTTGCGTCCAGCGGGGACGGTCTGGTGGTTACGGTGGATCGGGACTCTGGTGAGGTGCTGTGGATGCAGAAGTTTGATTCTCCAGTGGCAGGGTTTTATTTATGGAGTCAGGACAGTCTGCGGCGAGCTCCTCATCTGACGGTGGCAACCGAAACGCTGCGTTACCTGACCTTCACTGCGGAAAACACACAGTCGCACACCATGAAGTGGACCTACCAGTTCACAAAGGAGAACCACAGCACTAAGACTCAGCTAGTTCCTACTCTCTATGTTGGCAAGACGGACTCTCATCTGTATGCTTCTACCTCTCTTGTGCACCAAGGTGTTGCAATAGTGCCAAAAGGTCTTACACTTGCACGCATTGAGGGGCCAATCACTGCTGGCGTCACAATGGGTAATGGGCGGCCCGAGTGTGAGATCACACCCAGCACTGACGTGAAATATCCACCAGGAAGCAGCAGTTCCCTGCAGAATCAGTGGCTGCTCATTGgtcACCATGAAGTCCCCCCCTTGGCTCACACCACCATGTTGAGAGATTTCCCAGAGAACCTGCAGCGCTCTGGTGATGTCATCCCACCCCGAGGTTCTGGTTCCTCTTTCCGTTCTCCCTCTCACCCATTGCCACCGGTAACAAAGCACAGCTCCTCCCCTGTGTTGCCAGActctttgacctctgaccccatgACTGTGCTGGTGGTGACACTGCTGCTGGGAGCATGGATTGCTTTCCTGCTAACACACAAAAGGCCTGTCAGAAAATCCCAGAGATCTGAAGAGCCAGTGGACTCCAACCCTCCGCCATtgttgaccaatcagagcactaACACAGAACCCAGTGCTCCGCCCTCAACCTCATCTTACAACAACAGCCATTCAGAGAAGACTAGCTCTGTGGCATCCAATCAAACTCAGCCATACTCAAGCAAAGACTCCGCCCAAATAATGACAGCTGGCCAATCACAGAGTGATCAGCCTGACGTTGTGGAAGTTGGTAAAATCTCTTTCAGTCCTGCTGAGGTGCTGGGCCACGGGACAGAGGGAACCTTTGTGTTCCGGGGTCATTTTGACGGTCGGCGTGTGGCAGTAAAGCGTATCCTCCCGGAGTGTGTGGAGTTTGCAGAGCGAGAGGTTCAGCTCCTCCGTGAATCGGATGAGCATCCCAACGTCATCCGTTACTTCTGCACAGAGCGGGACAGACAGTTTACTTACATTGCAATAGAGCTGTGTGCTGCTACACTCCaacagTATGTGGAGGACCCAAGCTGTCCTTATTCAGACCTGAACCCAGTGTCCCTGCTGGACCAGACCATGTGTGGCCTCAGTCACCTGCACTCCCTCAATATCGTTCACAGGGATTTAAAGCCACGGAATATTTTGCTCTCTCTCCCGGGGGCATTGGGTCGAGTCCGGGCGGTGATCTCAGATTTCGGCTTGTGTAAGAAGCTTCCAGATGGTCGCCATAGTTTCAGCCTACGCTCTGGAATACCAGGAACCGAAGGCTGGATTGCCCCTGAATTACTCATAAATGCTCCGAAAGGCAACCCTACAAGTGCAGTAGACATATTTTCGGCtggatgtgtgttttattatgtgACATCCAAAGGACAGCATCCTTTTGGTGACACTCTGCGGCGTCAAGCTAATATCCTCTCTGGAGTCTATAACCTTGACCACTTTATGGAGGATATACATGAGGATGTGATTGGCAGAAATCTGATTGAGCGGATGATCAGTCCTGAACCAGAAACCCGTCCTTCAGCAGCGTCTGTCCTCAAACATCCCTTCTTTTGGAGCCCAGAGAAACAACTGCAGTtctttcagGATGTCAGTGACAGAATAGAGAAGGAGCCAGCAGACAGCGCTATAGTGGGCCGTTTGGAGAACTCTGGCAGATTTGTGGTAAGAACCAACTGGAGGATGCACATATCAGCACCACTGCAGGCTGATCTTCGAAAATTTCGGACGTATAAAGGAAACTCTGTGAGAGATTTACTTAGAGCAATGAGAAATAAAAAGCATCATTATCATGAGCTCCCACCAGAGGTTCAGACGGCTCTCGGTGAAGTCCCTGATGGCTTTGTGGCATATTTTACCTCCCGTTTCCCGCGGTTACTGCTTCACACGCATTCAGCCCTTAGCATCTGTGCCCCCGAGAGACTCTTCCACCCATACTACCACCACTGAACATCCACAGAGACATGCTTGTTTGTTCCAAACTGAACTGGAGAGGAAAAGTAGGATCCTTGAGGAAACAGAGACCTCGAGGACCGAACCACACACTGTCGATGTATAACTCTGTACTGTGAGCACATTTCATTGTAGAGTACTACTGACAATTTTCTCCTAAACACTCTTgatttttatgcttttacagAAACAGGTTTTAGATTAACCCAAAAGGTTACTGAGTGTGTAAATGGGCTTTTATAGAGCTGCCGTTCTTTGCTGCTGGTTTCATCACATCAACCAAATGCCATATTTTACCACTTCTGTTTTTAATTCTGACTATTAACACACAAGATTACTGAATTGCCAACTGACTACTTATATTGTTAATAGGTAGAAAGTAAAGTATTTTCAACACAGAGACATggtttcttaaagggatagttcaccacaaaattttcaaaaaggagtgaaaaatatataaatgtgatcGATTACGTGTAGGATATAATAACTTTGTgtgtgaaattgaaattttgggtgaactatactcGTAGGCAGGTTAtatgtttgaaaaataataaaagccaaATCTTCCACTGATATTTGCAGATATATGACACTATTTGATAATTAGtggactttaaaaaaatactagttTGTCTGTCATATTGTACACCACgtgtacatttatatgtatttgtgtgattCAGATGCATTGGGACTGGGattgggatttttttctttcgtttttaCTTTGTGTGGTTTTAATTGCAGCTTCATGCTACATTTCTGGATGTGTTATCCTCCACCACACATTGCAGCTTCATCCTTATCTCTCAGTGTTACAGCTTTAAAACCAAATATTGCGAAGTGTTTTACAACCTGCTGTACACTAGTTTTATACTGCtagtttaaaagaaatgtctttttataaattaagTGTTGAGGATTTTTGCCACTGGAAATACTGGTGCCTTTGTTTTTCTACCCAGTGaagattaaatgtatttgccagcaaaaaatcttttaaattatttatggcACAGATCAAAAACTCTTATACATGATTCAGATTAATGTTGTTAATGCTGTTATGGATTTCCATGGCATAAAATACTGATTCTTTCAGGTGGTATTGACATACTGTGTTAATTAcaagttactttaaaaacacattggCATTACCATTATCTGTGTACAATAACGTGGTAGTAGCATGGTACTTTTTTGCTGCATCTACTACAGGTTACTAGTCAAagttttaaagctaaaaatgaaacctttttatACTGACTGCCCTGCAAAACATTTCAGACTGAAATAGAATCCTAAATAAACTGTACCTTTAAGTGTT

Function

symbol description
ern2 Predicted to enable endoribonuclease activity; protein serine/threonine kinase activity; and unfolded protein binding activity. Predicted to be involved in IRE1-mediated unfolded protein response and intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress. Predicted to act upstream of or within mRNA processing and protein phosphorylation. Predicted to be located in membrane. Predicted to be part of IRE1-TRAF2-ASK1 complex. Is expressed in liver. Orthologous to human ERN2 (endoplasmic reticulum to nucleus signaling 2).

NR:

description
PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE2

GO:

id name namespace
GO:0006397 mRNA processing biological_process
GO:0006468 protein phosphorylation biological_process
GO:0090501 RNA phosphodiester bond hydrolysis biological_process
GO:0005524 ATP binding molecular_function
GO:0004540 ribonuclease activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08852 ERN1; serine/threonine-protein kinase/endoribonuclease IRE1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241694.1 True 4398 mRNA 0.45 22 6299916 6312773

Neighbor

gene id symbol gene type direction distance location
palb2 palb2 coding downstream 11339 6281173 ~ 6288577 (-)
ndufab1a ndufab1,LOC107725395,LOC107590767,LOC107702508,LOC107722929 coding downstream 19300 6277057 ~ 6280616 (-)
grin2ab grin2ab,LOC107564541,LOC107692695,LOC107722958,LOC108439083,LOC107725390,LOC108258284 coding downstream 94770 6138623 ~ 6205146 (-)
abcg2b abcg2b,LOC107692667,LOC107725367,LOC107564610 coding downstream 192936 6099976 ~ 6106980 (-)
actb1 actb1,actb2,actbb,LOC103039558,LOC102799139,LOC103383494 coding downstream 212154 6084199 ~ 6087762 (-)
LOC122342505 LOC107565181 coding upstream 16888 6329661 ~ 6330527 (-)
zgc:136472 zgc:136472,LOC107692654,LOC107702524,LOC107572430,LOC107722945,LOC107590714 coding upstream 21164 6333937 ~ 6338319 (-)
ubn1 LOC107692651,LOC107702522,LOC107725361,LOC107722945,LOC107590714 coding upstream 27074 6339847 ~ 6350501 (-)
micall2b LOC107564427,LOC107702520,LOC107590718,LOC107722924,LOC107692650,LOC107725362 coding upstream 126262 6439035 ~ 6452642 (-)
LOC122347228 NA coding upstream 233188 6545961 ~ 6547468 (-)
G1288 NA non-coding downstream 81327 6218244 ~ 6218589 (-)
G1282 NA non-coding downstream 85369 6213641 ~ 6214547 (-)
G1263 NA non-coding downstream 210513 6089023 ~ 6089403 (-)
G1257 NA non-coding downstream 232302 6066311 ~ 6067614 (-)
G1254 NA non-coding downstream 236731 6062356 ~ 6063185 (-)
G1394 NA non-coding upstream 76647 6389420 ~ 6389637 (-)
G1398 NA non-coding upstream 100609 6413382 ~ 6413581 (-)
LOC122347249 NA non-coding upstream 174871 6487644 ~ 6490193 (-)
G1499 fgb,LOC107665922,LOC107692638,LOC107714148,LOC107564337 non-coding upstream 469640 6782413 ~ 6839409 (-)
G1519 NA non-coding upstream 489521 6802294 ~ 6802755 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other downstream 25165 6267663 ~ 6274751 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other downstream 73802 6220604 ~ 6226114 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other downstream 186393 6111463 ~ 6113523 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other downstream 446667 5844144 ~ 5853249 (-)
mdh1b mdh1b other downstream 1339706 4956119 ~ 4960210 (-)
gng13a NA other upstream 14250 6327023 ~ 6328341 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other upstream 143271 6456044 ~ 6468254 (-)
LOC122342514 NA other upstream 220728 6533501 ~ 6544558 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other upstream 758816 7071589 ~ 7134282 (-)
G1642 NA other upstream 812869 7125642 ~ 7170022 (-)

Expression


Co-expression Network