fbxl18 (fbxl18)


Basic Information

Item Value
gene id fbxl18
gene name fbxl18
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6078416 ~ 6083178 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241809.1
ACGTCTTTCAAAGTTTCCGATGGTGCTACATCTTGATGCCGCTATATGTGTGCCTACAGAGGCAGTCACATTTTCAATggatgaattatatattttttgagatGGCAACAATTTGTTATTGTGTATCATTGAAGTACATATCCAAACAGATTTCCTTAAAGCGTCATGGATGATCAAATTGAAACGGCTTTGTGCTGTTTAGACAGCATTTCCCAGACCTCTGTCACTATCTCAGACTTCTCGGATGAAATTTTACTGAATATCCTGCGATTCATTCCAAGCCATGACCTGATGCTTAATGTGAGTCAAGTGTGCCGGAAACTTCGAACTCTCTGTCTGGACAAGAGCTTGAGAGCCCACATACACCTGCATAAAGAATTTACAGCAAAAGACGATGCTGTGAAGCAGCttttgaagaacctttctggCGACATCCAGACTTTAAACCTGAGCGGCTGCTACTGGTTGGCCGGCTTTACAGTGGATCAGGTCACCCGCTGTAAGGCTCTGGTCAGCCTGGACCTTTCAGGCTGTCGGTTGACTTCAGTTCGCCTCTCGCATCTCCTGACCTCTCTTCGTTCTCTGCGCTCTCTGGCATTGGATGTGGGGCCGGGGTTTGACCTCCATCAGCTGAGCGCCGAGGGTAAGTCTGCTTTGGCGCGTCTGCAGGAGCTCAAGCAGACATTGTTGACTCCCTCGTACGGCGTGGTTCCGTGCTGCAGTGCCCTTCGCCGCCTGCACCTCTATCTAGAGGCCAGCGAGGGCTGGAGGGAAGCGGGCGGCTGCGCACAGCTGATGGTGGGCCAGAGCAGCGTGCCGCATTATCAGAACCTGCGTTGGTTCTCTGCACGCTTGGCGCCTGGTGAAGTCAACCGCACTCTATTGGCGCTCTACTTAGCTGTCTTCAGTATGAGAGTCCCGGAGGGTCTTACTGGACTGGTACTATCTGTGCCGGGCCCCGCACCACCGAGGCCGGTTGCAATGACGGCGTTAATGGAGAGCATGGCGTCGACGGTGGGAAACACCGTTAGCGCTCTCCAGCTTCCACGCACGTGGTTGGATGGTGCTATACTTGGGCGGGTCTTGGCGCATGGCTGCCCCGCTTACCTGAATGTCTCACGCTGTTCATCTCCAGGGTTCAACCCTCTACATGTGCTCCTTAGTGCAGGGCGTGACCTCACACCCTTAAAGAGTCTCAACTTGCGCGGTTGCGGCCGAGGGCCTCTCGCTGAGAGCTGTGGGAAGGGCGAGGAGGAGATGGATGCAGAGAGCGTCAAATCGCTTACTGAATGTTGCCCGCATCTCATTCACCTTAATTTATCGGCCACGCACTACCACCATGCTCTTCCCGCTGGGCAGGATGGACACTTGTGTGGCTCTTTAGGGCGTCTCGCTGCCTTGTGCTCTTTGGCACTTCCGGTGTGTGCCTTGGCACAGTCTGCTCAAGCACCTGCAAACATTCAAGACTCCAACACAGACCTCTCCTCAAGATCACTACTACTCGGGCTCAAAAAGAGCAGCCGCATCGGGGTGCCTACATATCGACCCTCAACCGAGGTCACCGTGGTTCAGGGAGAAGAGCGGCGGGATAGAGGCTTGTGCGTTCAGCCTCTGCTCCAAGGTTGCCCACATCTAGTGGAGCTGGAGCTGATTGGCGCAGGGTTTTCCTCTGCCATGCCACGCAATGAGCCGGCCATCCGCAAGGACCCTGCTGCATGCCCCTGGTCTTATAATGTCGGAGATGGTGagttagctgctttgggagggATGAAATTTTTGCGCAAGCTCACCCTCGCTCACTTACCGGGAGTTTTGAAGGGGACGGGACTGATCGAGCTGGTTCAGGGGTGCAAGGACCTTTGTTCGTTATCGCTGGCCAATCTTGGATCTTTAAAGACCATGAACTACATGCAGGCGCTGCTGGAAGCTCTTTCCTACTGTACACAGCTCAGGGACTTACGACTGGAGCAGCCCTATTTAAATGCGAACGCTGCGTTTTTTGAAGCACTCAGTCAGTGTCACCATCTGCGGCGTGTGTGTTTGGTTTCTCGACATGGGACCTTCCAGCCCGCCGCTGTGGCGTCCTTCATGCAGAGCTGCGCTGACGTCATCATGTGTCACATGTTCATGGGTGGTACCCTGGTGGCCTGTAAAACTCTGCAGAAAACCCTGCTGGACAGTTTCTCGGTATCTCGTCCAGCCCTCAGTGTGGTGATTTACCCTTTACTGCACGAGGATCTGGCCCATGTTATCAGAGGTATGCCACTTTGCCATCTGGACGAGATCACGCTTTTCAAAAGCCGTGTCGCTGAAGAGCCCATTAAACAGTGACTGTAATCAAGACGAAATCAGAAAATGGAAATCATGTGGTGGATTAACCTGGTTAATGCTTTGTGTCAGAGAAGCATTATATTATgcaaattgttttatatatatatatatatattagtgaaaCAATTTTGGAAAAcctatttgtttttactttaaaaggtCTTTGAGCAAAATGGACAATCACTACTTTTGCGTTTCCTAGTAAAGAGGTGGTGTAATCATACTCCTTACCAGGTTGAAATGTCATCTTTGCATATGTGCCAAAATAAAACCTTGTCTGATA

Function

symbol description
fbxl18 Acts upstream of or within sclerotome development. Predicted to be part of SCF ubiquitin ligase complex. Orthologous to human FBXL18 (F-box and leucine rich repeat protein 18).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K10284 FBXL18; F-box and leucine-rich repeat protein 18

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241809.1 True 2614 mRNA 0.51 5 6078416 6083178

Neighbor

gene id symbol gene type direction distance location
LOC122347076 NA coding downstream 143 6074411 ~ 6078273 (-)
LOC122347124 NA coding downstream 4474 6071930 ~ 6073942 (-)
ptcd1 LOC107692668,LOC107725401,LOC107722939,LOC107590737,LOC107565220,LOC107575409 coding downstream 19151 6054892 ~ 6059265 (-)
zgc:112980 LOC107564628,LOC107692670,LOC107702537,LOC107722968,LOC107725351,LOC107590736 coding downstream 30607 6039555 ~ 6047809 (-)
syngr3b syngr3b,LOC107692735,LOC107590758,LOC107722933,LOC107702512,LOC107565597,LOC107725368,LOC108441471 coding downstream 98713 5974469 ~ 5979703 (-)
actb1 actb1,actb2,actbb,LOC103039558,LOC102799139,LOC103383494 coding upstream 1021 6084199 ~ 6087762 (-)
abcg2b abcg2b,LOC107692667,LOC107725367,LOC107564610 coding upstream 16798 6099976 ~ 6106980 (-)
grin2ab grin2ab,LOC107564541,LOC107692695,LOC107722958,LOC108439083,LOC107725390,LOC108258284 coding upstream 55445 6138623 ~ 6205146 (-)
ndufab1a ndufab1,LOC107725395,LOC107590767,LOC107702508,LOC107722929 coding upstream 193879 6277057 ~ 6280616 (-)
palb2 palb2 coding upstream 197995 6281173 ~ 6288577 (-)
G1257 NA non-coding downstream 10802 6066311 ~ 6067614 (-)
G1254 NA non-coding downstream 15231 6062356 ~ 6063185 (-)
G1248 LOC107725398,LOC107692671,LOC107722970,LOC107722977,LOC107590704,LOC107564637,LOC107702540 non-coding downstream 44417 6031896 ~ 6033999 (-)
G1246 NA non-coding downstream 57485 6020556 ~ 6020931 (-)
G1240 NA non-coding downstream 104354 5970390 ~ 5974062 (-)
G1263 NA non-coding upstream 5845 6089023 ~ 6089403 (-)
G1282 NA non-coding upstream 130463 6213641 ~ 6214547 (-)
G1288 NA non-coding upstream 135066 6218244 ~ 6218589 (-)
G1394 NA non-coding upstream 306242 6389420 ~ 6389637 (-)
G1398 NA non-coding upstream 330204 6413382 ~ 6413581 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other downstream 225167 5844144 ~ 5853249 (-)
mdh1b mdh1b other downstream 1118206 4956119 ~ 4960210 (-)
G820 NA other downstream 1779223 4298310 ~ 4299193 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other downstream 2064129 4007840 ~ 4014287 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other downstream 2793630 3136508 ~ 3284786 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other upstream 28285 6111463 ~ 6113523 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other upstream 137426 6220604 ~ 6226114 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other upstream 184485 6267663 ~ 6274751 (-)
gng13a NA other upstream 243845 6327023 ~ 6328341 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other upstream 372866 6456044 ~ 6468254 (-)

Expression


Co-expression Network