mxa (mxa,LOC107725377,LOC107565622,LOC107702551)


Basic Information

Item Value
gene id mxa
gene name mxa,LOC107725377,LOC107565622,LOC107702551
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5611908 ~ 5616115 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241868.1
GATGATACAGTGAGAGAAACGAAACTTGCATTGTCTCGGAAATGAAACTTACCGGCGTAGTGGAGTAACGTTAACCACAGCCAGATTTGCCtcgaaaaaaaacatcactctGTGACGAACTCAAAACGAGTCCACTTCGCCGTTTTGGTTTGTTATCGTGATACTTAGAAActattttggcattttaaagcCGTTTAAGGATGGAGAAGATGAGTTACACGTTCAGTCAGCAATATGAGGAAAAAATCCGTCCTTGCATCGACACCATCGACAATCTACGGTCTCTGGGAGTCGAAAAGGACCTGGCGCTGCCTGCCATCGCCGTCATTGGAGACCAAAGCTCGGGGAAGAGTTCAGTTCTCGAGGCGCTGTCTGGAGTGGCGTTACCCAGGGGTAGTGGAATTGTTACAAGATGTCCTCTTGAGCTCAAGATGATAAGAAGTAAAGATGAAGACAAATGGCATGGGAGAATCAGCTACCAGGACATACAGGAAGATATTCATGATCCAGCAGAAGTGGAGAAAAAGATCCGTGAAGCTCAGGATGAGATGGCTGGAGTAGGTGTTGGTATTAGTGATGAACTCATCAGTCTGCAGATCACCTCTGCCAATGTCCCTGACCTCACTCTCATTGACCTCCCTGGTATCGCACGAGTGGCTGTCAAGGGGCAACCGGAGAATATTGGGGATCAGattaAGAGACTGATCAGGAAGTTCGTTACAAAGCAAGAAACGATTAACCTGGTCGTGGTGCCATGCAATGTTGACATCGCAACCACAGAAGCGTTAAAGATGGCTCAGGAGGAGGACACTGAAGGCGAAAGAACATTAGGTATCTTAACAAAGCCGGATCTGGTGGACAAGGGCACCGAAGAGACAGTTGTAGACATTGTGCACAATGAGGTCATTCACCTTACTAAAGGTTACATGATTGTGAGGTGCAGAGGACAAAAAGAGATTTTAGATCAAGTCACTCTCAATGAGGCCACAGAAACAGAGAAGGCCTTCTTCAAAGATCATCCTCATTTTAGcAAACTTTATGAAGAAGGTTTTGCCACTGTTCCCAAGTTGGCTGAGAAACTAACAATTGAGTTGGTTCATCACATTCAGAAATCCCTGCCACGTTTAGAACAACAAATCGAGACAAAACTTGCTGAAACACAGAAGGAACTGGAGGCATACGGCAACGGACCCCCAACAGATCCTGGAGAAAGACTGAGTTTTCTCATTGATAAAGTTACAGCTTTCACTCATGATATGTTCAACCTGACCACTGGGGAGGAAGTTAAATGTGCTTCAGATCTACTAGTTTTTCCAGAACTTCGGGATGAATTTGCAAAATGGAACAACGTCTTGCATCGTTCTGGAGTTTCCTTCAACATGAAGATTGAAAAAGAAGTGGATAACTATGAAGCCAAGTATCGAGGAAGAGAGCTTCCAGGATTCATCAATTACAAGACCTTTGAGGGGCTTGTCAAGGAACAGGTCAAGCTGTTGGAGGAACCTGCATTGAAGACACTGAAGATTGTCTCTgATGTGGTTAGAAAGAAGTTCATCCAGTTGGCCCAGTGCAGTTTCATTGGTTTCCCTAATCTTCTAAAAATAGCAAAGACTAAGATTGAAGCCATCAAGCAGGATAAAGAATCCCAAGCAGAATCTATGCTGAGAACCCAATTCAAGATGGAGCTCATTGTTTACAGTCAAGATGGCACATACAGCCAGAGTCTGCAACATGCAAAGGACAAGcaggaagaaaatgaaaagttagcttcaaaaactaaaaagaataGTGTTGTGATTTTAGACGTTGGTACAGATAATCATGCCACTTTGCGTGAGATGAGGTTGCACCTTGAGTCCTATTACATGATTGCAAGCAAGCGTCTAGCTGACCAGATCCCGATGGTGATCCGCTATCTGCTGCTCCAGGAAGCAACTTTGGAGCTGCAGAGGAACATGTTGCAGTTACTGCATGATAAAGATGGCATAGACAACTTGCTTAAAGAGGACTTTGATATTGGCCTAAAGCGTGAGAGCTTACTGAGTCGCCAGAAACGTCTGATGAAGGCACGCAGCCTCTTGGTTACCTTTTAGAATTCACTTCAAATACTTAAGTAGTATGCTGAGAGCAGCGTTGGCAGCAAAGAATTTAAACATTCATTCtggtttatgtttttattacaaaaaatggcCATTGAGCACTTATTCTTTTACatcctttttaactttttactaTTTGTATACCATTTGTTACTATTTACTATTACTTAAAGCAAtaataatgtactttttattattcgTGTCAATAAAGTTTGTACTGCTTTTGGGTCTA

Function

symbol description
mxa Predicted to enable GTPase activity and microtubule binding activity. Acts upstream of or within response to arsenic-containing substance; response to bacterium; and response to virus. Predicted to be active in several cellular components, including cytoplasm; microtubule; and nucleus. Is expressed in several structures, including digestive system; gill; heart; immune system; and muscle. Human ortholog(s) of this gene implicated in alopecia areata; avian influenza; liver disease; and prostate cancer. Orthologous to human MX1 (MX dynamin like GTPase 1) and MX2 (MX dynamin like GTPase 2).

NR:

description
PREDICTED: interferon-induced GTP-binding protein MxA-like

GO:

id name namespace
GO:0009615 response to virus biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0046685 response to arsenic-containing substance biological_process
GO:0005737 cytoplasm cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K14754 MX; interferon-induced GTP-binding protein Mx

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241868.1 True 2331 mRNA 0.43 12 5611908 5616115

Neighbor

gene id symbol gene type direction distance location
klf7a klf7a,LOC107725403,LOC107752450,LOC107676060,LOC107674020,LOC107556267 coding downstream 536297 5038724 ~ 5075611 (-)
pard3ba pard3ba,LOC107673991,LOC107750057,LOC107676058,LOC107749732,LOC107549438,LOC107556285 coding downstream 715008 4765299 ~ 4896900 (-)
nrp2a nrp2a,nrp2,LOC107556288,LOC107749808,LOC107750056,LOC107673990,LOC107676043 coding downstream 872448 4673689 ~ 4739460 (-)
fn1b fn1b,LOC107749885,LOC107556289,LOC107674002,LOC107750053,LOC107676051,LOC107549419 coding downstream 993281 4597080 ~ 4618627 (-)
mnx2b mnx2b,LOC107750883,LOC107674001,LOC107556279,LOC107676047 coding downstream 1037488 4569834 ~ 4574420 (-)
LOC122342384 NA coding upstream 9595 5625710 ~ 5629067 (-)
efnb2b efnb2b,LOC107725384,LOC107701778,LOC107590693,LOC107702517,LOC107705455,LOC107565280 coding upstream 30031 5646146 ~ 5655085 (-)
arglu1b NA coding upstream 40522 5656637 ~ 5661762 (-)
radil radil,LOC107722964,LOC107725399,LOC107564693,LOC107590699 coding upstream 130355 5746470 ~ 5766103 (-)
LOC122347131 LOC107725363,LOC107722975,LOC107590701,LOC103909971 coding upstream 154588 5770703 ~ 5776946 (-)
G1117 NA non-coding downstream 3990 5579526 ~ 5607918 (-)
G1124 LOC107701616,LOC107565289,LOC107705456,LOC107702505 non-coding downstream 44930 5561377 ~ 5566978 (-)
G1116 LOC107565289,LOC107701616,LOC107705456,LOC107590690,LOC107702505 non-coding downstream 51053 5560618 ~ 5560855 (-)
G1115 NA non-coding downstream 54566 5556880 ~ 5557342 (-)
G1114 NA non-coding downstream 56158 5555490 ~ 5555750 (-)
G1146 NA non-coding upstream 160983 5777098 ~ 5778154 (-)
G1151 NA non-coding upstream 173552 5789667 ~ 5789919 (-)
G1240 NA non-coding upstream 354275 5970390 ~ 5974062 (-)
G1246 NA non-coding upstream 404441 6020556 ~ 6020931 (-)
G1248 LOC107725398,LOC107692671,LOC107722970,LOC107722977,LOC107590704,LOC107564637,LOC107702540 non-coding upstream 415781 6031896 ~ 6033999 (-)
mdh1b mdh1b other downstream 651698 4956119 ~ 4960210 (-)
G820 NA other downstream 1312715 4298310 ~ 4299193 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other downstream 1597621 4007840 ~ 4014287 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other downstream 2327122 3136508 ~ 3284786 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other downstream 2922444 2688765 ~ 2689464 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other upstream 228029 5844144 ~ 5853249 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other upstream 495348 6111463 ~ 6113523 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other upstream 604489 6220604 ~ 6226114 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other upstream 651548 6267663 ~ 6274751 (-)
gng13a NA other upstream 710908 6327023 ~ 6328341 (-)

Expression


Co-expression Network