zgc:136472 (zgc:136472,LOC107692654,LOC107702524,LOC107572430,LOC107722945,LOC107590714)


Basic Information

Item Value
gene id zgc:136472
gene name zgc:136472,LOC107692654,LOC107702524,LOC107572430,LOC107722945,LOC107590714
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6333937 ~ 6338319 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241973.1
TAGCGCTTCATACTTTCTCACACACCCAAAGGTCAGAGAGTCAGTGAAGGCAGTATGAAGGTGTACGTTGCGCTTCGCCTGATCTTGTGCTTGTATTTACGCAAAGCTCTGGCGGAGAGCGATTCCAGTGCGATCCTTGAAGACAGAGACGTTCTAGTGCTGACAAAAAGCAATTTCGAACGAGCTCTTCAACAGCACGAGCAGCTATTGGTCCATTTCTACGCGCCTCTTTCTGGACAGTCCCTTGGTTCCATCCTTGAGTTTCGAGAAGCGGCCGGTGCACTGAAGGAAACCGAGTCTGATTTGAGACTGGGAGGAGTGGatgtgaaaaaggaaaaagatctTGCTGCATCCCTTAACGTCAAAGTAATACCATCACTACGACTGTACCTGTCTGGAGACAAGAACAACCCAGTGTACTGTCCTGATCTTAAGAGCTCCGCCTCCATCCTAACGTGGCTTAAAAGAAGAAAAGGGCCGAGCGCTAACATCATCAGTAATTTCACACAGCTGGAAAAATTTATAGGGGAAGATGAGCTTGTTGTGCTGGGATTATTTAAGGATCTCGAGGAAGGCATAGTGAACGTGTTTTATGAAACAGCCGCTGACATTGCTGACCTGCCCTTTGGGGTAACAGGACATGATGAGATCTTTAGCAAGTATGAGATTAGTGGAGATACTGTTCTTCTCATAAGAAAGTCTGAACCTGACAAGCAGTTTGAGATGCGAAGCAGCACCGTGAAGAAAGATCTCGCTCAATTCATCAGACTATATGAGATGGAACTTGTGACTGAGTACAATGGCAGGACAGCATCTAAGATCCTGAACTCAGAGGTGCTGAACcattttcttctgtttattaataagACTGAGAAAGGATTCGAAGAGATATACCATGCTTTTAAAACCGCTGCAGGAAATCTCAGAGGGAAGGTTCTGTTTGTGATGATTGACGTGAGCGAGGTACGGAACGGACGTGTTATGGAGTATTTCCGTGTGAGGTCAGAAGAGGCTCCTCAGGTCCTTATGGTCAATCTGTCAGACCACGTTCAATACCAGCTCCCATCTGATCAGTTCGACACACAAACTCTTTTAGAGTTCTGTCTCAGTTACCTGGGTGGGAAAGCTAAGcCTAAGCTGCAAAGTGAGCCAATTCCTGAAAACTGGGACACACAGCCAGTGAAAGAGCTGGTTGGGATGAACTTTGAAAAAGTGGCTTTTAACCATAATAAAACCGTCATTGTCTTGTTCTATGCACCGTGGAGCAGTGAAAGTCGTGCTCTGTTTCCACTGTGGGAGGAGCTTGCTGAACATTTTAGTGAAAAAGATGATGTTGTCGTTGCCAAAATTGACATTACAGCCAACGACATAAACCTTCATCTAGGAGAAAAATACCCATCGATCAAATTTTTTCCTGCTCTTTATTCAGAGAGGGTAGTGCCATATTCTGGCAAGAGGAAGCTGAAAcctataataacatttatgaaaaaagaGATTGAAAAAGCCAAGACGGACAAGGCAAAGGAGGAGGAACGGAGGAAGAAGTATCTGAATGAACAGAAGGCTGCAGTAAAAGAAGAACTCTGATCATTCAATGTAACGGCTATTAGAACAgctttattgatttgttttgaacGTTTTAGGTGTATAcgaccattcaaaggtttgggatcGGAACAAAGTTTAGTATGCTCTCAGATGCTACGTCGATTTGGTtggaaaaacagtaaaaagtaatattttcatatattttaaaatgtaatttgatgcAAAACTGAGttgtcattactccagtcttcattcTAAGGTGCTGATTATCTGCTAAGGAACATTTCTTCTTAAATTGTGCTCccaaatgtttttgtggaacccatgacataaatatattatatatatatatatatat

Function

symbol description
zgc:136472 Predicted to be involved in protein folding and response to endoplasmic reticulum stress. Predicted to be active in endoplasmic reticulum. Orthologous to human PDILT (protein disulfide isomerase like, testis expressed).

NR:

description
PREDICTED: protein disulfide-isomerase

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241973.1 True 1906 mRNA 0.42 11 6333937 6338319

Neighbor

gene id symbol gene type direction distance location
LOC122342505 LOC107565181 coding downstream 3410 6329661 ~ 6330527 (-)
ern2 ern2,LOC107702527,LOC107722925,LOC107590742 coding downstream 21164 6299916 ~ 6312773 (-)
palb2 palb2 coding downstream 45360 6281173 ~ 6288577 (-)
ndufab1a ndufab1,LOC107725395,LOC107590767,LOC107702508,LOC107722929 coding downstream 53321 6277057 ~ 6280616 (-)
grin2ab grin2ab,LOC107564541,LOC107692695,LOC107722958,LOC108439083,LOC107725390,LOC108258284 coding downstream 128791 6138623 ~ 6205146 (-)
ubn1 LOC107692651,LOC107702522,LOC107725361,LOC107722945,LOC107590714 coding upstream 1528 6339847 ~ 6350501 (-)
micall2b LOC107564427,LOC107702520,LOC107590718,LOC107722924,LOC107692650,LOC107725362 coding upstream 100716 6439035 ~ 6452642 (-)
LOC122347228 NA coding upstream 207642 6545961 ~ 6547468 (-)
LOC122346971 ugt5b3,ugt5b4,LOC107564400,LOC107692647,LOC107714140 coding upstream 241885 6580204 ~ 6593716 (-)
LOC122346986 ugt5b1,LOC107692647,LOC107714140,LOC107564400 coding upstream 250738 6589057 ~ 6593789 (-)
G1288 NA non-coding downstream 115348 6218244 ~ 6218589 (-)
G1282 NA non-coding downstream 119390 6213641 ~ 6214547 (-)
G1263 NA non-coding downstream 244534 6089023 ~ 6089403 (-)
G1257 NA non-coding downstream 266323 6066311 ~ 6067614 (-)
G1254 NA non-coding downstream 270752 6062356 ~ 6063185 (-)
G1394 NA non-coding upstream 51101 6389420 ~ 6389637 (-)
G1398 NA non-coding upstream 75063 6413382 ~ 6413581 (-)
LOC122347249 NA non-coding upstream 149325 6487644 ~ 6490193 (-)
G1499 fgb,LOC107665922,LOC107692638,LOC107714148,LOC107564337 non-coding upstream 444094 6782413 ~ 6839409 (-)
G1519 NA non-coding upstream 463975 6802294 ~ 6802755 (-)
gng13a NA other downstream 5596 6327023 ~ 6328341 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other downstream 59186 6267663 ~ 6274751 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other downstream 107823 6220604 ~ 6226114 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other downstream 220414 6111463 ~ 6113523 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other downstream 480688 5844144 ~ 5853249 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other upstream 117725 6456044 ~ 6468254 (-)
LOC122342514 NA other upstream 195182 6533501 ~ 6544558 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other upstream 733270 7071589 ~ 7134282 (-)
G1642 NA other upstream 787323 7125642 ~ 7170022 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other upstream 865685 7204004 ~ 7295829 (-)

Expression


Co-expression Network