LOC122347080


Basic Information

Item Value
gene id LOC122347080
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5779697 ~ 5782861 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242102.1
taaaaGTTGAAACATACGATCTTTGACATTAGTCTTCAGAGTGAGAAACAAGCCTTCGTCTGTAATTTAACGCATATTGCTGATGTTGATCGTCAAGATTAACAACATATAAACTAAAATGGGCTCATCTGAATCAAAATCTCAACATCCTGAGGTCTTGACTCCTGAACCAAAACCAGTGGACAAACAAGTAGTCCGAGAGCTGGAAACCCCATGGAGGAAATTCAATTGGAATCAGAAAGAAGAACTGAAAGCAAAGCTGGAAAACTTTACCCCAGCTAATCCAAATGCAAAGGACATCAAGATCCTGGTAGCTGGACAAATTGGAGCAGGAAAGTCCAGCTTTATTAACTCCATCTGCAGCGCCATTCAAGGACGGATCTCCGCTAGAGCGCTGGTTAATTCATCTGCTGGCGACAGTCATAGTTTCACTCAAAGTCTCAAAGGATTCACCATCAGAAGTGGGAAAAAAACGTTGCCCTTTGTCTTCAAGGACATCATGGGCTTGGAACCTGAAGTTTTGGCTGGGTCGCAAACGGAAGACATCATCAATGCTGTGTTTGGACACGTCAAGGACGGCTATAAATTCAACCAGGACCAGGCCCTCTCTCATAAGGATCAACATTACAACTTTGACCCCAACCTCACCGACCAGGCTTTCTGCCTGGTTTACATAATACCCGGGGATACAGTCCAATTCACGGATCATCGACTTCTTGACAAGTTGAAGATCATCCGGCAGAGAATCAGCGATAAGGGAATTCCTCAAGTGGTTGTCATGACCAAAGTGGATGAAACATGTCCACTGGTCAGACAAGACCTGGAAAAGATGTACACTAGCAAGAAAATCAAACAGAAGATGGAGTTGTGCAGTAGTGCAACTGGTGTGCCAATGTCAAACATCTTCCCGGTGAAGAACTATCACGATGAGATTGAAACAGATGATAAAACTGATGTTCTGATACTAAAGGCACTTGAACAGATTATTCAGCTTGCTGATGATAGACTGGAGGATAGTGATATCTACTGAAaagaatcatatatatatatatatatatatatat
>XM_043242110.1
taaaaGTTGAAACATACGATCTTTGACATTAGTCTTCAGAGTGAGAAACAAGCCTTCGTCTGTAATTTAACGCATATTGCTGATGTTGATCGTCAAGATTAACAACATATAAACTAAAATGGGCTCATCTGAATCAAAATCTCAACATCCTGAGGTCTTGACTCCTGAACCAAAACCAGTGGACAAACAAGTCCGAGAGCTGGAAACCCCATGGAGGAAATTCAATTGGAATCAGAAAGAAGAACTGAAAGCAAAGCTGGAAAACTTTACCCCAGCTAATCCAAATGCAAAGGACATCAAGATCCTGGTAGCTGGACAAATTGGAGCAGGAAAGTCCAGCTTTATTAACTCCATCTGCAGCGCCATTCAAGGACGGATCTCCGCTAGAGCGCTGGTTAATTCATCTGCTGGCGACAGTCATAGTTTCACTCAAAGTCTCAAAGGATTCACCATCAGAAGTGGGAAAAAAACGTTGCCCTTTGTCTTCAAGGACATCATGGGCTTGGAACCTGAAGTTTTGGCTGGGTCGCAAACGGAAGACATCATCAATGCTGTGTTTGGACACGTCAAGGACGGCTATAAATTCAACCAGGACCAGGCCCTCTCTCATAAGGATCAACATTACAACTTTGACCCCAACCTCACCGACCAGGCTTTCTGCCTGGTTTACATAATACCCGGGGATACAGTCCAATTCACGGATCATCGACTTCTTGACAAGTTGAAGATCATCCGGCAGAGAATCAGCGATAAGGGAATTCCTCAAGTGGTTGTCATGACCAAAGTGGATGAAACATGTCCACTGGTCAGACAAGACCTGGAAAAGATGTACACTAGCAAGAAAATCAAACAGAAGATGGAGTTGTGCAGTAGTGCAACTGGTGTGCCAATGTCAAACATCTTCCCGGTGAAGAACTATCACGATGAGATTGAAACAGATGATAAAACTGATGTTCTGATACTAAAGGCACTTGAACAGATTATTCAGCTTGCTGATGATAGACTGGAGGATAGTGATATCTACTGAAaagaatcatatatatatatatatatatatat

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242102.1 True 1064 mRNA 0.42 7 5779697 5782861
XM_043242110.1 False 1059 mRNA 0.42 7 5779697 5782859

Neighbor

gene id symbol gene type direction distance location
en1b eng1b,en1,LOC107705463,LOC107702516 coding upstream 107379 5668397 ~ 5672318 (+)
LOC122347193 pcnp,LOC107564735,LOC107590694,LOC107702552 coding upstream 168958 5608329 ~ 5610739 (+)
mylz3 mylz3,LOC107725378,LOC107564772,LOC107701775,LOC107702554,LOC107705457 coding upstream 172282 5603707 ~ 5607415 (+)
lancl1 lancl1,LOC107564761,LOC107702553,LOC107590692 coding upstream 179642 5593642 ~ 5600055 (+)
si:ch73-383l1.1 erbb4a,erbb4,LOC107705456,LOC108440448,LOC107674013,LOC107702505,LOC107707608,LOC107667809 coding upstream 216824 5440065 ~ 5562873 (+)
slc5a10 slc5a10 coding downstream 54252 5837113 ~ 5860158 (+)
LOC122342392 LOC107725347,LOC107565259,LOC107701771 coding downstream 93845 5876706 ~ 5879991 (+)
LOC122342401 LOC107725347,LOC107701771,LOC107565259 coding downstream 97834 5880695 ~ 5888652 (+)
cacna1hb LOC107725349,LOC107722927,LOC107590735,LOC107565250,LOC108441470,LOC107701772,LOC107702501,LOC107692701 coding downstream 111732 5894593 ~ 5973200 (+)
myo15ab LOC107725350,LOC107692700,LOC107565240,LOC108441473 coding downstream 201577 5984438 ~ 6019955 (+)
G1086 NA non-coding upstream 105014 5674372 ~ 5674683 (+)
G1064 mxa,mx1,LOC107702551 non-coding upstream 153421 5593214 ~ 5626276 (+)
G1060 NA non-coding upstream 155753 5615720 ~ 5623944 (+)
G1061 NA non-coding upstream 156816 5614387 ~ 5622881 (+)
LOC122344626 NA non-coding upstream 371399 5404612 ~ 5408298 (+)
G1154 si:dkeyp-9d4.3,LOC107725391,LOC107701782,LOC107564683,LOC107722956,LOC107590702 non-coding downstream 14532 5797393 ~ 5798851 (+)
G1161 NA non-coding downstream 49448 5832309 ~ 5861878 (+)
G1162 NA non-coding downstream 50234 5833095 ~ 5841013 (+)
G1195 LOC107751037 non-coding downstream 292837 6075698 ~ 6077286 (+)
G1199 NA non-coding downstream 306648 6089509 ~ 6089855 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other upstream 753783 4979125 ~ 5025914 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other upstream 802434 4967186 ~ 4977263 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other upstream 834856 4938181 ~ 4944841 (+)
G826 NA other upstream 1421401 4358007 ~ 4358296 (+)
G824 NA other upstream 1422437 4356698 ~ 4357260 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other downstream 96599 5879460 ~ 5881134 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other downstream 274543 6057404 ~ 6087655 (+)
G1318 NA other downstream 502997 6285858 ~ 6287198 (+)
G1414 NA other downstream 750641 6533502 ~ 6536957 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other downstream 928774 6711635 ~ 6845548 (+)

Expression


Co-expression Network