LOC122347093


Basic Information

Item Value
gene id LOC122347093
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5784721 ~ 5789621 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242124.1
tgaaattgAAACAGACACCTCTATATAATGGTTCTGGGGGAGATCTGACTTTAATAGCTTAGGTTGAGGCAAAACAGCGGTGTTCCAGCGTAGAgctaatacaaatatattgggaaaaaaatgggATCATCAGAGTCAGTGCCGTTGCAAAATCCAGaacTGGATCAACCATGGAGGACATTTGACTGGGGacagaaAAAAGCCCTAAAAGAAAAGCTGGAAAACTTCACCCCGAGTCATCCAAATGTGAAGAACATCACGATCCTGGTAGCTGGAGAGATTGGAGCAGGGAAGTCCAGCTTTATTAACTCTATTGACAGTGCCTTTCAAAACCGGATCACTTCTAGAGCGCTGGTTAATTCAGCTGCCACTGGTCATAGTTTCACTCAAAAGCTCAAAGGATTCACCATCAGAAGTGGGACAAAAAATTTGCCCTTCGTCTTCAAGGACATCATGGGCCTGGAACCTAAAGCATTGGCTGGGTCACAAACAGAGGACATCATCAACGCTATGTATGGCCACGTGAAGGATGGCTATAAATTCAAAGAAGATAGGCCAATCTCTTGTGAGGATCAACAATACAGCCATGATCCCAGCCTCTCCGACCAGTCTTTCTGCCTGGTTTACGTCTTACCTTTAGATATGGTCCAATACACAGATGATCGTCTTATTGATAAGCTGACGATCATCCGCCAGAGAATCAGTGAAAAGGGTATTCCTCAAGTGATTGTCCTGACTAAAGTGGATGAAGCATGTCCGCTGGTCCAAAAGGATCTGAGGAAGGTCTACACTAGCAAGAAAATCAAGGAGAAGATGGAGTTGTGCAGTGCTAAAATAGGTGTACCAATGACAAACATTTTCCCTGTGAAGAACTACCACAATGAGATCAACACAGATGATAACACTGATATTCTGATACTAAAGGCACTTGAACAGATTGTTCAGACTGCTGATGACAGATTGCTGGATAATGAAAGCtactgacaaaaataataagcatgTCTTTGCTCATCACTGTGCATACCGTGAGCTCTCGCACTGATCTGAGATTTTCCCCTCAAACAGAagaaaatgatataataattcacaatataatgtgaacaaaaaaacaaacactttacaAATAGGCCAATAAATAATCCACATATCAGACTAAATTGCACTGCTTCAAAtcctttacattttaagatgttcagagtaataataatatacttgaataataataaatctattttacaCTAGGTACAAAAAATAGTTCCTCTCAGGACATTTAGgacaaaaaatgtgcatattgaAACTACTATTATTAACCACAGTGTCTGTAAAAGGATGCAATACTTTCATTCTGTTAGCAAGGCTTCAAAAATAAACTCTTTACTGTGTTATACCA

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242124.1 True 1390 mRNA 0.39 7 5784721 5789621

Neighbor

gene id symbol gene type direction distance location
LOC122353693 NA coding downstream 7064 5777571 ~ 5777657 (-)
LOC122347131 LOC107725363,LOC107722975,LOC107590701,LOC103909971 coding downstream 7775 5770703 ~ 5776946 (-)
radil radil,LOC107722964,LOC107725399,LOC107564693,LOC107590699 coding downstream 18618 5746470 ~ 5766103 (-)
arglu1b NA coding downstream 122959 5656637 ~ 5661762 (-)
efnb2b efnb2b,LOC107725384,LOC107701778,LOC107590693,LOC107702517,LOC107705455,LOC107565280 coding downstream 129636 5646146 ~ 5655085 (-)
si:dkeyp-9d4.3 si:dkeyp-9d4.3,LOC107701782,LOC107725391,LOC107722956,LOC107590702,LOC107564683,LOC108441467 coding upstream 2995 5792616 ~ 5833693 (-)
grapb grapb,LOC107701786,LOC107564666,LOC108258884,LOC107722955,LOC107702513,LOC107590757,LOC108441477 coding upstream 71405 5861026 ~ 5870757 (-)
syngr3b syngr3b,LOC107692735,LOC107590758,LOC107722933,LOC107702512,LOC107565597,LOC107725368,LOC108441471 coding upstream 184848 5974469 ~ 5979703 (-)
zgc:112980 LOC107564628,LOC107692670,LOC107702537,LOC107722968,LOC107725351,LOC107590736 coding upstream 249934 6039555 ~ 6047809 (-)
ptcd1 LOC107692668,LOC107725401,LOC107722939,LOC107590737,LOC107565220,LOC107575409 coding upstream 265271 6054892 ~ 6059265 (-)
G1146 NA non-coding downstream 6567 5777098 ~ 5778154 (-)
G1117 NA non-coding downstream 176803 5579526 ~ 5607918 (-)
G1124 LOC107701616,LOC107565289,LOC107705456,LOC107702505 non-coding downstream 217743 5561377 ~ 5566978 (-)
G1116 LOC107565289,LOC107701616,LOC107705456,LOC107590690,LOC107702505 non-coding downstream 223866 5560618 ~ 5560855 (-)
G1115 NA non-coding downstream 227379 5556880 ~ 5557342 (-)
G1151 NA non-coding upstream 46 5789667 ~ 5789919 (-)
G1240 NA non-coding upstream 180769 5970390 ~ 5974062 (-)
G1246 NA non-coding upstream 230935 6020556 ~ 6020931 (-)
G1248 LOC107725398,LOC107692671,LOC107722970,LOC107722977,LOC107590704,LOC107564637,LOC107702540 non-coding upstream 242275 6031896 ~ 6033999 (-)
G1254 NA non-coding upstream 272735 6062356 ~ 6063185 (-)
mdh1b mdh1b other downstream 824511 4956119 ~ 4960210 (-)
G820 NA other downstream 1485528 4298310 ~ 4299193 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other downstream 1770434 4007840 ~ 4014287 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other downstream 2499935 3136508 ~ 3284786 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other downstream 3095257 2688765 ~ 2689464 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other upstream 54523 5844144 ~ 5853249 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other upstream 321842 6111463 ~ 6113523 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other upstream 430983 6220604 ~ 6226114 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other upstream 478042 6267663 ~ 6274751 (-)
gng13a NA other upstream 537402 6327023 ~ 6328341 (-)

Expression


Co-expression Network