LOC122347124


Basic Information

Item Value
gene id LOC122347124
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6071930 ~ 6073942 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242185.1
TGGGAGAAATGTTGTGGATCAAGTTTGTGCACCTCAAAAGTGTTTATATGTTGAAAGACACCATCGGGACGTTATAAATAATCACCCATCTCACCACAACAGCAGTGTTTCCTTGCCTTTGGTGACGAAAGGTTAATAGCGTGATCTTGGACTTGTACTGCTATACATTTAAGAGAAATCGATCACTCATCAactcctcatcttcatcatgaTGTTTCTTCTTCGTGCGCTGATGCTGTCGCTTCTCTTCGGTGCATCGGCCAAAGTTGTGCAGGATTTTCAGAAAGAATGCGGCCAATTTTTTGCAAACGGGAGATCACCAACAATATTTCCTGAACCACAATACAAGCAGATCTGTCAAACTCTAAATGGTAATTGTTATTATGCCACACTTTATGACACTAGTAAAAAGATCCCCGTGTACTCTGCCTACAAGTTTGAAGGAGTAATGGGCTGCACAAGAACAGACACGTGGTACGTTGAACCTCAAATTGATGATATTACGAAAGGAGGAAATATGGACTTTTCGAGGACTGTGTATATACAACAGCGTGGACTCTATCAAGCTGTCAATAGTGATTATGAGGGTTCTGGATACGACAGAGGTCATCTGGCACCGGTCTACCTGGCAAACTCACAGAGCTGTGCTGATGCCACCTTCACTCTCACCAATGCTGCTCCACAAACCAAATGTTTTAACAGAATTTTTTGGTTTGAAAAAGAACAATCACTggcaaataaactgaaaaaggaTTGTTTTTCACAACAGGTTTACATTGTGACAGGGGTGGTACCAGGTACAACAAACATAGCAAATAGAGTGAACGTGCCCAGTTATTTCTGGACTGCATACTGCTGCTTAGACAACAATAAAAGATGTTCAATCTCAGGAGGATTTATCGGGAGCAATGAAAATGACTCCAAAATTAGGGAAATGAACGTAGCTGATTTACAGAGAGAGTTGACAAAACTTTatggaaaaacatttcaattttagtttcaataataatactaaaaacagAAAGGGCTTACATAAAATAGTGTGATTTGCAATACTTATTTTGAGTGATATTTTATGCAGATTGTATTTTCGTTACAATTATAATCCTTACTGTCAAAATCATAAAACCTTGTGCCAGatggcattgattttttttttcatatattttttacatttctaatattatatgttatatatactatattatatatgttatatatattatatgcatttaatttaatatagaaTAACATAAAGAGAGTGACAATTGTCTGTAGAAtcataatgaaaatgatttgattttaacttttagcattataatatattagcTGTAAAACTATCGACTTCTTATAcctataataaaaatcattaatactGCAAACTTTGTACTGGAAGCttgtgtaaattttttttacataaccaGATGTTGTTAGTTTATATGGTATCTGACTGTATCAGAcagcacagtaaaaaaaaaacaaaaacaaaatggacCGGTCATTTTTACCAGGATATTAACCATTTCTGTAAACCTCAATGcaattcaaattaataaataaataaataaataagg
>XM_043242194.1
TTGGGAGAAATGTTGTGGATCAAGTTTGTGCACCTCAAAAGTGTTTATATGTTGAAAGACACCATCGGGACGTTATAAATAATCACCCATCTCACCACAACAGCAGTGTTTCCTTGCCTTTGGTGACGAAAGGTTAATAGCGTGATCTTGGACTTGTACTGCTATACATTTAAGTTGTAGCAATTGCAAAAACTGTTGTTGTACCTGCGGAGAAATCGATCACTCATCAactcctcatcttcatcatgaTGTTTCTTCTTCGTGCGCTGATGCTGTCGCTTCTCTTCGGTGCATCGGCCAAAGTTGTGCAGGATTTTCAGAAAGAATGCGGCCAATTTTTTGCAAACGGGAGATCACCAACAATATTTCCTGAACCACAATACAAGCAGATCTGTCAAACTCTAAATGGTAATTGTTATTATGCCACACTTTATGACACTAGTAAAAAGATCCCCGTGTACTCTGCCTACAAGTTTGAAGGAGTAATGGGCTGCACAAGAACAGACACGTGGTACGTTGAACCTCAAATTGATGATATTACGAAAGGAGGAAATATGGACTTTTCGAGGACTGTGTATATACAACAGCGTGGACTCTATCAAGCTGTCAATAGTGATTATGAGGGTTCTGGATACGACAGAGGTCATCTGGCACCGGTCTACCTGGCAAACTCACAGAGCTGTGCTGATGCCACCTTCACTCTCACCAATGCTGCTCCACAAACCAAATGTTTTAACAGAATTTTTTGGTTTGAAAAAGAACAATCACTggcaaataaactgaaaaaggaTTGTTTTTCACAACAGGTTTACATTGTGACAGGGGTGGTACCAGGTACAACAAACATAGCAAATAGAGTGAACGTGCCCAGTTATTTCTGGACTGCATACTGCTGCTTAGACAACAATAAAAGATGTTCAATCTCAGGAGGATTTATCGGGAGCAATGAAAATGACTCCAAAATTAGGGAAATGAACGTAGCTGATTTACAGAGAGAGTTGACAAAACTTTatggaaaaacatttcaattttagtttcaataataatactaaaaacagAAAGGGCTTACATAAAATAGTGTGATTTGCAATACTTATTTTGAGTGATATTTTATGCAGATTGTATTTTCGTTACAATTATAATCCTTACTGTCAAAATCATAAAACCTTGTGCCAGatggcattgattttttttttcatatattttttacatttctaatattatatgttatatatactatattatatatgttatatatattatatgcatttaatttaatatagaaTAACATAAAGAGAGTGACAATTGTCTGTAGAAtcataatgaaaatgatttgattttaacttttagcattataatatattagcTGTAAAACTATCGACTTCTTATAcctataataaaaatcattaatactGCAAACTTTGTACTGGAAGCttgtgtaaattttttttacataaccaGATGTTGTTAGTTTATATGGTATCTGACTGTATCAGAcagcacagtaaaaaaaaaacaaaaacaaaatggacCGGTCATTTTTACCAGGATATTAACCATTTCTGTAAACCTCAATGcaattcaaattaataaataaataaataaataagg

Function

GO: NA

KEGG:

id description
K15049 ENDOD1; endonuclease domain-containing 1 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242185.1 False 1574 mRNA 0.34 4 6071930 6073941
XM_043242194.1 True 1611 mRNA 0.35 4 6071930 6073942

Neighbor

gene id symbol gene type direction distance location
ptcd1 LOC107692668,LOC107725401,LOC107722939,LOC107590737,LOC107565220,LOC107575409 coding downstream 12665 6054892 ~ 6059265 (-)
zgc:112980 LOC107564628,LOC107692670,LOC107702537,LOC107722968,LOC107725351,LOC107590736 coding downstream 24121 6039555 ~ 6047809 (-)
syngr3b syngr3b,LOC107692735,LOC107590758,LOC107722933,LOC107702512,LOC107565597,LOC107725368,LOC108441471 coding downstream 92227 5974469 ~ 5979703 (-)
grapb grapb,LOC107701786,LOC107564666,LOC108258884,LOC107722955,LOC107702513,LOC107590757,LOC108441477 coding downstream 201173 5861026 ~ 5870757 (-)
si:dkeyp-9d4.3 si:dkeyp-9d4.3,LOC107701782,LOC107725391,LOC107722956,LOC107590702,LOC107564683,LOC108441467 coding downstream 238237 5792616 ~ 5833693 (-)
LOC122347076 NA coding upstream 469 6074411 ~ 6078273 (-)
fbxl18 fbxl18 coding upstream 4474 6078416 ~ 6083178 (-)
actb1 actb1,actb2,actbb,LOC103039558,LOC102799139,LOC103383494 coding upstream 10257 6084199 ~ 6087762 (-)
abcg2b abcg2b,LOC107692667,LOC107725367,LOC107564610 coding upstream 26034 6099976 ~ 6106980 (-)
grin2ab grin2ab,LOC107564541,LOC107692695,LOC107722958,LOC108439083,LOC107725390,LOC108258284 coding upstream 64681 6138623 ~ 6205146 (-)
G1257 NA non-coding downstream 4316 6066311 ~ 6067614 (-)
G1254 NA non-coding downstream 8745 6062356 ~ 6063185 (-)
G1248 LOC107725398,LOC107692671,LOC107722970,LOC107722977,LOC107590704,LOC107564637,LOC107702540 non-coding downstream 37931 6031896 ~ 6033999 (-)
G1246 NA non-coding downstream 50999 6020556 ~ 6020931 (-)
G1240 NA non-coding downstream 97868 5970390 ~ 5974062 (-)
G1263 NA non-coding upstream 15081 6089023 ~ 6089403 (-)
G1282 NA non-coding upstream 139699 6213641 ~ 6214547 (-)
G1288 NA non-coding upstream 144302 6218244 ~ 6218589 (-)
G1394 NA non-coding upstream 315478 6389420 ~ 6389637 (-)
G1398 NA non-coding upstream 339440 6413382 ~ 6413581 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other downstream 218681 5844144 ~ 5853249 (-)
mdh1b mdh1b other downstream 1111720 4956119 ~ 4960210 (-)
G820 NA other downstream 1772737 4298310 ~ 4299193 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other downstream 2057643 4007840 ~ 4014287 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other downstream 2787144 3136508 ~ 3284786 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other upstream 37521 6111463 ~ 6113523 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other upstream 146662 6220604 ~ 6226114 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other upstream 193721 6267663 ~ 6274751 (-)
gng13a NA other upstream 253081 6327023 ~ 6328341 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other upstream 382102 6456044 ~ 6468254 (-)

Expression


Co-expression Network