LOC122347131 (LOC107725363,LOC107722975,LOC107590701,LOC103909971)


Basic Information

Item Value
gene id LOC122347131
gene name LOC107725363,LOC107722975,LOC107590701,LOC103909971
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5770703 ~ 5776946 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242209.1
AATGCGCCGAACTAGCAGGCGAtgctttgtctgaagccagcaTCCTACACGGATTGAGTATAAAGCGGACCGGACCTGGACGATCCGCTCGTTTCTCTCAGCAGGAAGACCGGGGTCCTGAAACCGTTACATGCGCTCTACTTCCGGATCACCACTAACGCTCGCTTCGTTGTAGACCTCATCCCACGAATGTTATTTTAAGAGTGATTgtctttttttcgtttttttttttctttttttataatcgGCGTGTGTCTGAAAGACGAGCCGCTCCTCGAGATCCCGAACCGAGCCGCGCGCGTTACCCATACTCGAGCAACTGTTGGATTTACGCGTTTAAATGAAACTTGTAAGatttatgaaCAATCGTGCACCATCTAATAAGAGATATCAGCCAACAGAATATGAGCACGCTGCTAACTGTGCCACACATGCGcTCTGGATCATTCCCAGCATTGTGGGTGGGATCTTGTTGTACCTCTTATCTGATGACCACTGGGAGGAGATTTCAGCATGGCTCTATGGGGCAGGACTATCAAGCCTTTTCATCATATCCACCGTTTTTCATACTGTCTCCTGGAAAAAGTCTCATCTCCGATCAGTCGAGCACTGTTTCCACATGTGCGACAGGATGGTGATATATTTCTTCATTGCGGCGTCCTACACACCTTGGCTGACGCTGCGGGATCTTGGCCCATGGGCTGCCCACATGCGTTGGGTGGTCTGGGTGATGGCAACTGGAGGAACCGCCTATGTGTTCTTCTTCCATGAAAGGTTTAAAGTTGTAGAGCTGATCTGTTACATAGCTATGGGTGTTTTCCCAGCTCTTGTCATCCTCTCTATGGCAGACAGGTCAGGTCTGTGCGAGCTGTTGGTTGGCGGCGGGTGTTATGTGCTGGGCATGGTGTTCTTTAAAAGTGATGGAATAGTGCCCTTTGCTCATGCTATATGGCATCTGTTTGTTGCAATGGGAGCAGGCGTCCATTACTATGCCATCTGGAAGTACCTGTACACGCCTGTCAATCAACCAACCAGTACGGCTcggtgacacacacactcacacacctaaCCTAACACAATCATTCGAAGATATATTTGTCACTAAAGTGCTACTAAAGCATAAGCGGTATTGTTTATTTGCTCTATTGTGTTTTTGCTTGCGAGCGGTTTGACCGATGTCGTTCTTGTCACTTATTAATAGGTCTTTAACTAGCACACACAACAGAAATTACATCTAGCCTTTGCGAGACAGCAGGAAGCAGGGGTCATTTCGGACCCGAGGCCGTGTGGATCCAGAACAAGAACGCTTCTAGAAAACCGTGGACGCGTTGCATGAAGGTTTACTATTGTTTTCAAAAGCGAAGGTAAAATCACTGCcagatatttgtaaaaacattcatCCTGGATAGTAATTACTTGACGACGTCGATGAGGTTTTTCTGTAGTGTCTTTAAACCGACTTGGGATTATTCCACTGAATCTGCCACTGCCAGTGTGGAGATTGTTTTATTCCTGTCAGAAATATGAGCGCATTTCGTATTACTGCACACAGTATCAGCTCTCCATGCTTCCAGTCTAGTGCTAGTCTGTCGCATTTTTGGATGTGTAATGTCTTTGGAAAATGCCATAAGTGCTTGATGACTGTGTCCAGGGAAAGGTTTGCCTGACTGGTCATCTGATTACATTATTCAATGGAAAAGTTCAGGCTCTCGTATTAtgattgtgcatttttttttattttaagacgtGTTTAATGTGGTAacatctatttattaatttttaatcaagtcagagtattatttaatattctaattaatatttaacgACTGAATCACAATGGATACATCATAGGATTACACCAACAAACCATTTTAAGCTTTaacacatttacagtttttgcgCCATTGAGACTTGCTTGGTGCCAATGAAAACGCGTTTTGGTTGTTATTTATTCGTTTCAATTTACAGCTGCTGTAGATGTTGTGTTACAGATCATTTTATAAGGGAACTTAATAGGGTGTGAAAAACATTGTACACTGAAAATCATCAGCTactcatttttatcatttaactaATTCACGAACAGGAACTACATTTTGAGAGAAAACTGATGCACTGACTTCACCTCAGATCAGTTTGAGTGTCATTAAAGAAACAATGCATCCAAAACTGAAACCTGTCAGCATTTACTCACACGTTTAGTTCCATACCTgcgtttttttgtctttcttttgtagaattctaaatgaaacatttagcagaatgtccaggctgttttcttttttttttaattaatcgcataaaaaagt
>XM_043242216.1
ATGAGTGTGAATGCGCCGAACTAGCAGGCGAtgctttgtctgaagccagcaTCCTACACGGATTGAGTATAAAGCGGACCGGACCTGGACGATCCGCTCGTTTCTCTCAGCAGGAAGACCGGGGTCCTGAAACCGTTACATGCGCTCTACTTCCGGATCACCACTAACGCTCGCTTCGTTGTAGACCTCATCCCACGAATGTTATTTTAAGAGTGATTgtctttttttcgtttttttttttctttttttataatcgGCGTGTGTCTGAAAGACGAGCCGCTCCTCGAGATCCCGAACCGAGCCGCGCGCGTTACCCATACTCGAGCAACTGTTGGATTTACGCGTTTAAATGAAACTTGTAAGatttatgaaCAATCGTGCACCATCTAATAAGAGATATCAGCCAACAGAATATGAGCACGCTGCTAACTGTGCCACACATGCGcTCTGGATCATTCCCAGCATTGTGGGTGGGATCTTGTTGTACCTCTTATCTGATGACCACTGGGAGGAGATTTCAGCATGGCTCTATGGGGCAGGACTATCAAGCCTTTTCATCATATCCACCGTTTTTCATACTGTCTCCTGGAAAAAGTCTCATCTCCGATCAGTCGAGCACTGTTTCCACATGTGCGACAGGATGGTGATATATTTCTTCATTGCGGCGTCCTACACACCTTGGCTGACGCTGCGGGATCTTGGCCCATGGGCTGCCCACATGCGTTGGGTGGTCTGGGTGATGGCAACTGGAGGAACCGCCTATGTGTTCTTCTTCCATGAAAGGTTTAAAGTTGTAGAGCTGATCTGTTACATAGCTATGGGTGTTTTCCCAGCTCTTGTCATCCTCTCTATGGCAGACAGGTCAGGTCTGTGCGAGCTGTTGGTTGGCGGCGGGTGTTATGTGCTGGGCATGGTGTTCTTTAAAAGTGATGGAATAGTGCCCTTTGCTCATGCTATATGGCATCTGTTTGTTGCAATGGGAGCAGGCGTCCATTACTATGCCATCTGGAAGTACCTGTACACGCCTGTCAATCAACCAACCAGTCTTTAACTAGCACACACAACAGAAATTACATCTAGCCTTTGCGAGACAGCAGGAAGCAGGGGTCATTTCGGACCCGAGGCCGTGTGGATCCAGAACAAGAACGCTTCTAGAAAACCGTGGACGCGTTGCATGAAGGTTTACTATTGTTTTCAAAAGCGAAGGTAAAATCACTGCcagatatttgtaaaaacattcatCCTGGATAGTAATTACTTGACGACGTCGATGAGGTTTTTCTGTAGTGTCTTTAAACCGACTTGGGATTATTCCACTGAATCTGCCACTGCCAGTGTGGAGATTGTTTTATTCCTGTCAGAAATATGAGCGCATTTCGTATTACTGCACACAGTATCAGCTCTCCATGCTTCCAGTCTAGTGCTAGTCTGTCGCATTTTTGGATGTGTAATGTCTTTGGAAAATGCCATAAGTGCTTGATGACTGTGTCCAGGGAAAGGTTTGCCTGACTGGTCATCTGATTACATTATTCAATGGAAAAGTTCAGGCTCTCGTATTAtgattgtgcatttttttttattttaagacgtGTTTAATGTGGTAacatctatttattaatttttaatcaagtcagagtattatttaatattctaattaatatttaacgACTGAATCACAATGGATACATCATAGGATTACACCAACAAACCATTTTAAGCTTTaacacatttacagtttttgcgCCATTGAGACTTGCTTGGTGCCAATGAAAACGCGTTTTGGTTGTTATTTATTCGTTTCAATTTACAGCTGCTGTAGATGTTGTGTTACAGATCATTTTATAAGGGAACTTAATAGGGTGTGAAAAACATTGTACACTGAAAATCATCAGCTactcatttttatcatttaactaATTCACGAACAGGAACTACATTTTGAGAGAAAACTGATGCACTGACTTCACCTCAGATCAGTTTGAGTGTCATTAAAGAAACAATGCATCCAAAACTGAAACCTGTCAGCATTTACTCACACGTTTAGTTCCATACCTgcgtttttttgtctttcttttgtagaattctaaatgaaacatttagcagaatgtccaggctgttttcttttttttttaattaatcgcataaaaaagt

Function

NR:

description
PREDICTED: monocyte to macrophage differentiation factor 2-like isoform X2

GO: NA

KEGG:

id description
K11064 MMD; monocyte to macrophage differentiation protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242209.1 True 2309 mRNA 0.42 7 5770703 5776937
XM_043242216.1 False 2151 mRNA 0.42 8 5770703 5776946

Neighbor

gene id symbol gene type direction distance location
radil radil,LOC107722964,LOC107725399,LOC107564693,LOC107590699 coding downstream 4600 5746470 ~ 5766103 (-)
arglu1b NA coding downstream 108941 5656637 ~ 5661762 (-)
efnb2b efnb2b,LOC107725384,LOC107701778,LOC107590693,LOC107702517,LOC107705455,LOC107565280 coding downstream 115618 5646146 ~ 5655085 (-)
LOC122342384 NA coding downstream 141636 5625710 ~ 5629067 (-)
mxa mxa,LOC107725377,LOC107565622,LOC107702551 coding downstream 154588 5611908 ~ 5616115 (-)
LOC122353693 NA coding upstream 625 5777571 ~ 5777657 (-)
LOC122347093 NA coding upstream 7775 5784721 ~ 5789621 (-)
si:dkeyp-9d4.3 si:dkeyp-9d4.3,LOC107701782,LOC107725391,LOC107722956,LOC107590702,LOC107564683,LOC108441467 coding upstream 15670 5792616 ~ 5833693 (-)
grapb grapb,LOC107701786,LOC107564666,LOC108258884,LOC107722955,LOC107702513,LOC107590757,LOC108441477 coding upstream 84080 5861026 ~ 5870757 (-)
syngr3b syngr3b,LOC107692735,LOC107590758,LOC107722933,LOC107702512,LOC107565597,LOC107725368,LOC108441471 coding upstream 197523 5974469 ~ 5979703 (-)
G1117 NA non-coding downstream 162785 5579526 ~ 5607918 (-)
G1124 LOC107701616,LOC107565289,LOC107705456,LOC107702505 non-coding downstream 203725 5561377 ~ 5566978 (-)
G1116 LOC107565289,LOC107701616,LOC107705456,LOC107590690,LOC107702505 non-coding downstream 209848 5560618 ~ 5560855 (-)
G1115 NA non-coding downstream 213361 5556880 ~ 5557342 (-)
G1114 NA non-coding downstream 214953 5555490 ~ 5555750 (-)
G1146 NA non-coding upstream 152 5777098 ~ 5778154 (-)
G1151 NA non-coding upstream 12721 5789667 ~ 5789919 (-)
G1240 NA non-coding upstream 193444 5970390 ~ 5974062 (-)
G1246 NA non-coding upstream 243610 6020556 ~ 6020931 (-)
G1248 LOC107725398,LOC107692671,LOC107722970,LOC107722977,LOC107590704,LOC107564637,LOC107702540 non-coding upstream 254950 6031896 ~ 6033999 (-)
mdh1b mdh1b other downstream 810493 4956119 ~ 4960210 (-)
G820 NA other downstream 1471510 4298310 ~ 4299193 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other downstream 1756416 4007840 ~ 4014287 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other downstream 2485917 3136508 ~ 3284786 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other downstream 3081239 2688765 ~ 2689464 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other upstream 67198 5844144 ~ 5853249 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other upstream 334517 6111463 ~ 6113523 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other upstream 443658 6220604 ~ 6226114 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other upstream 490717 6267663 ~ 6274751 (-)
gng13a NA other upstream 550077 6327023 ~ 6328341 (-)

Expression


Co-expression Network