grapb (grapb,LOC107701786,LOC107564666,LOC108258884,LOC107722955,LOC107702513,LOC107590757,LOC108441477)


Basic Information

Item Value
gene id grapb
gene name grapb,LOC107701786,LOC107564666,LOC108258884,LOC107722955,LOC107702513,LOC107590757,LOC108441477
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5861026 ~ 5870757 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242245.1
TGTACTACGGCAGACACACATTTTCTCTCAGATTCTCTATCATCATTGCGCTTCCTCAGTTTTCCACTCAGTGTTATTGTTGCACCAGTTTTTCTGCGCTGAAGGCTACTCATCATTCCTCTACAAATTATTCGTCTCATTCACCATCTCCATTACACATCTCCATACTCCATCCTTTTTTAATCATCTTCTTTACCATTTCATCTATTTCCATTTGCGCTTGTCCTTTcccattcctctctctctctgaactcttTCTTGTTTTAATCCCGGTCTCATCTccacttcacttcacttcactgCCTGTCTgtcctgtctgtttttttatgttttttcttcaatGGAGGCTGAGGCACTTTACAGTTTCAGAGCGACTGAATGTGATGAGCTCAGTTTCCAGAAGGGTGACATCTTGaagGTGACAAACATGGATGACGATCCGAACTGGTACACGGCCGAGCTGTTTGGTAGGCGGGGATATGTACCGAAGAACTATATCAATGTAAGACCTCACACGTGGTTTGTGGGCGGAATATCACGGCAGGCTGCAGAAAACCGCCTGAGACCTCTGGAGTGTGGCGCGTTTCTCATTAGGGAGAGCGAGAGCACACCGGGAGAGTTTTCCGTGTCTGTCAGttACGGAGACCACGTGCAGCACTTTAAGGTTTTGAAAGATGGACTGGGGCAGTTCTTCATATGGGATGAAGTCTTCAGCTCTCTCAACCAGCTGGTGGACTTCTACAAAATCAACAGCATTGCCAAAGAGAGAACTGTGTTCCTGAAAGAGCCTGAGGGATCATTAGCTaggcCACGTCATGCCCATGCCCTCTTTGACTTCACATCCAATCATGCGACTCATCTACGTTTCTTGCGCGGTGACATCATAGACCTGCTCGACTGTTCGGATGCTCAGTGCTGGAGGGGCCGGTGCCGTGGAAGAGTGGGCGTGTTTCCACCAGAGTATGTGCAGCCAATTTATCACTGAATTTGTGTCACCATCCTGTACAGCCCAGACTCATTCATCACTCACGCATATTCTTCATAAATCTAAAGGTAAACTAAGCCTCATTCATCATTGTTTGGTGTATCAGGCgattatatttttaaggttCGAATTTAACCTCATGTCAAAGGTCAACCTTTGCCCATCCTCTTCTTTTTTGATCACTTTCAGAAGGCAAATTAGAAATCAGTTATAACTTGTCAACAAACCAGTTGTATAACACCTTTAATGAATATAACAATTGACTATTCAATGTCATCATCAGCCATTATCTGAGCTTCCTGTCTATTCTTCTTTCAAATACTTTAAAGTCCTTTCAAATAAAGGCATGCCATTAAAACTAGTATCAACACtgcatattttaattgtatttattgcttaatgttttatattgatACAgtgcaaaaaatgcattatcatGTCAGAAGTGAGCCAGAAATACTATGTTTCTTTTATGCAATATAAAGCTCTATatgtaaaacaattatatatat
>XM_043242253.1
TGTACTACGGCAGACACACATTTTCTCTCAGATTCTCTATCATCATTGCGCTTCCTCAGTTTTCCACTCAGTGTTATTGTTGCACCAGTTTTTCTGCGCTGAAGGCTACTCATCATTCCTCTACAAATTATTCGTCTCATTCACCATCTCCATTACACATCTCCATACTCCATCCTTTTTTAATCATCTTCTTTACCATTTCATCTATTTCCATTTGCGCTTGTCCTTTcccattcctctctctctctgaactcttTCTTGTTTTAATCCCGGTCTCATCTccacttcacttcacttcactgCCTGTCTgtcctgtctgtttttttatgttttttcttcaatGGAGGCTGAGGCACTTTACAGTTTCAGAGCGACTGAATGTGATGAGCTCAGTTTCCAGAAGGGTGACATCTTGaagGTGGTGATATATGTAGCTGGGCAGCTTGTGGGATGGTACGATACAAGGTGACAAACATGGATGACGATCCGAACTGGTACACGGCCGAGCTGTTTGGTAGGCGGGGATATGTACCGAAGAACTATATCAATGTAAGACCTCACACGTGGTTTGTGGGCGGAATATCACGGCAGGCTGCAGAAAACCGCCTGAGACCTCTGGAGTGTGGCGCGTTTCTCATTAGGGAGAGCGAGAGCACACCGGGAGAGTTTTCCGTGTCTGTCAGttACGGAGACCACGTGCAGCACTTTAAGGTTTTGAAAGATGGACTGGGGCAGTTCTTCATATGGGATGAAGTCTTCAGCTCTCTCAACCAGCTGGTGGACTTCTACAAAATCAACAGCATTGCCAAAGAGAGAACTGTGTTCCTGAAAGAGCCTGAGGGATCATTAGCTaggcCACGTCATGCCCATGCCCTCTTTGACTTCACATCCAATCATGCGACTCATCTACGTTTCTTGCGCGGTGACATCATAGACCTGCTCGACTGTTCGGATGCTCAGTGCTGGAGGGGCCGGTGCCGTGGAAGAGTGGGCGTGTTTCCACCAGAGTATGTGCAGCCAATTTATCACTGAATTTGTGTCACCATCCTGTACAGCCCAGACTCATTCATCACTCACGCATATTCTTCATAAATCTAAAGGTAAACTAAGCCTCATTCATCATTGTTTGGTGTATCAGGCgattatatttttaaggttCGAATTTAACCTCATGTCAAAGGTCAACCTTTGCCCATCCTCTTCTTTTTTGATCACTTTCAGAAGGCAAATTAGAAATCAGTTATAACTTGTCAACAAACCAGTTGTATAACACCTTTAATGAATATAACAATTGACTATTCAATGTCATCATCAGCCATTATCTGAGCTTCCTGTCTATTCTTCTTTCAAATACTTTAAAGTCCTTTCAAATAAAGGCATGCCATTAAAACTAGTATCAACACtgcatattttaattgtatttattgcttaatgttttatattgatACAgtgcaaaaaatgcattatcatGTCAGAAGTGAGCCAGAAATACTATGTTTCTTTTATGCAATATAAAGCTCTATatgtaaaacaattatatatat
>XM_043242263.1
TGTACTACGGCAGACACACATTTTCTCTCAGATTCTCTATCATCATTGCGCTTCCTCAGTTTTCCACTCAGTGTTATTGTTGCACCAGTTTTTCTGCGCTGAAGGCTACTCATCATTCCTCTACAAATTATTCGTCTCATTCACCATCTCCATTACACATCTCCATACTCCATCCTTTTTTAATCATCTTCTTTACCATTTCATCTATTTCCATTTGCGCTTGTCCTTTcccattcctctctctctctgaactcttTCTTGTTTTAATCCCGGTCTCATCTccacttcacttcacttcactgCCTGTCTgtcctgtctgtttttttatgttttttcttcaatGGAGGCTGAGGCACTTTACAGTTTCAGAGCGACTGAATGTGATGAGCTCAGTTTCCAGAAGGGTGACATCTTGaagGTGACAAACATGGATGACGATCCGAACTGGTACACGGCCGAGCTGTTTGGTAGGCGGGGATATGTACCGAAGAACTATATCAATGTGGTTTGTGGGCGGAATATCACGGCAGGCTGCAGAAAACCGCCTGAGACCTCTGGAGTGTGGCGCGTTTCTCATTAGGGAGAGCGAGAGCACACCGGGAGAGTTTTCCGTGTCTGTCAGttACGGAGACCACGTGCAGCACTTTAAGGTTTTGAAAGATGGACTGGGGCAGTTCTTCATATGGGATGAAGTCTTCAGCTCTCTCAACCAGCTGGTGGACTTCTACAAAATCAACAGCATTGCCAAAGAGAGAACTGTGTTCCTGAAAGAGCCTGAGGGATCATTAGCTaggcCACGTCATGCCCATGCCCTCTTTGACTTCACATCCAATCATGCGACTCATCTACGTTTCTTGCGCGGTGACATCATAGACCTGCTCGACTGTTCGGATGCTCAGTGCTGGAGGGGCCGGTGCCGTGGAAGAGTGGGCGTGTTTCCACCAGAGTATGTGCAGCCAATTTATCACTGAATTTGTGTCACCATCCTGTACAGCCCAGACTCATTCATCACTCACGCATATTCTTCATAAATCTAAAGGTAAACTAAGCCTCATTCATCATTGTTTGGTGTATCAGGCgattatatttttaaggttCGAATTTAACCTCATGTCAAAGGTCAACCTTTGCCCATCCTCTTCTTTTTTGATCACTTTCAGAAGGCAAATTAGAAATCAGTTATAACTTGTCAACAAACCAGTTGTATAACACCTTTAATGAATATAACAATTGACTATTCAATGTCATCATCAGCCATTATCTGAGCTTCCTGTCTATTCTTCTTTCAAATACTTTAAAGTCCTTTCAAATAAAGGCATGCCATTAAAACTAGTATCAACACtgcatattttaattgtatttattgcttaatgttttatattgatACAgtgcaaaaaatgcattatcatGTCAGAAGTGAGCCAGAAATACTATGTTTCTTTTATGCAATATAAAGCTCTATatgtaaaacaattatatatata
>XM_043242272.1
TGTACTACGGCAGACACACATTTTCTCTCAGATTCTCTATCATCATTGCGCTTCCTCAGTTTTCCACTCAGTGTTATTGTTGCACCAGTTTTTCTGCGCTGAAGGCTACTCATCATTCCTCTACAAATTATTCGTCTCATTCACCATCTCCATTACACATCTCCATACTCCATCCTTTTTTAATCATCTTCTTTACCATTTCATCTATTTCCATTTGCGCTTGTCCTTTcccattcctctctctctctgaactcttTCTTGTTTTAATCCCGGTCTCATCTccacttcacttcacttcactgCCTGTCTgtcctgtctgtttttttatgttttttcttcaatGGAGGCTGAGGCACTTTACAGTTTCAGAGCGACTGAATGTGATGAGCTCAGTTTCCAGAAGGGTGACATCTTGaagGTGGTGATATATGTAGCTGGGCAGCTTGTGGGATGGTACGATACAAGGTGACAAACATGGATGACGATCCGAACTGGTACACGGCCGAGCTGTTTGGTAGGCGGGGATATGTACCGAAGAACTATATCAATGTGGTTTGTGGGCGGAATATCACGGCAGGCTGCAGAAAACCGCCTGAGACCTCTGGAGTGTGGCGCGTTTCTCATTAGGGAGAGCGAGAGCACACCGGGAGAGTTTTCCGTGTCTGTCAGttACGGAGACCACGTGCAGCACTTTAAGGTTTTGAAAGATGGACTGGGGCAGTTCTTCATATGGGATGAAGTCTTCAGCTCTCTCAACCAGCTGGTGGACTTCTACAAAATCAACAGCATTGCCAAAGAGAGAACTGTGTTCCTGAAAGAGCCTGAGGGATCATTAGCTaggcCACGTCATGCCCATGCCCTCTTTGACTTCACATCCAATCATGCGACTCATCTACGTTTCTTGCGCGGTGACATCATAGACCTGCTCGACTGTTCGGATGCTCAGTGCTGGAGGGGCCGGTGCCGTGGAAGAGTGGGCGTGTTTCCACCAGAGTATGTGCAGCCAATTTATCACTGAATTTGTGTCACCATCCTGTACAGCCCAGACTCATTCATCACTCACGCATATTCTTCATAAATCTAAAGGTAAACTAAGCCTCATTCATCATTGTTTGGTGTATCAGGCgattatatttttaaggttCGAATTTAACCTCATGTCAAAGGTCAACCTTTGCCCATCCTCTTCTTTTTTGATCACTTTCAGAAGGCAAATTAGAAATCAGTTATAACTTGTCAACAAACCAGTTGTATAACACCTTTAATGAATATAACAATTGACTATTCAATGTCATCATCAGCCATTATCTGAGCTTCCTGTCTATTCTTCTTTCAAATACTTTAAAGTCCTTTCAAATAAAGGCATGCCATTAAAACTAGTATCAACACtgcatattttaattgtatttattgcttaatgttttatattgatACAgtgcaaaaaatgcattatcatGTCAGAAGTGAGCCAGAAATACTATGTTTCTTTTATGCAATATAAAGCTCTATatgtaaaacaattatatatata
>XM_043242280.1
TGTACTACGGCAGACACACATTTTCTCTCAGATTCTCTATCATCATTGCGCTTCCTCAGTTTTCCACTCAGTGTTATTGTTGCACCAGTTTTTCTGCGCTGAAGGCTACTCATCATTCCTCTACAAATTATTCGTCTCATTCACCATCTCCATTACACATCTCCATACTCCATCCTTTTTTAATCATCTTCTTTACCATTTCATCTATTTCCATTTGCGCTTGTCCTTTcccattcctctctctctctgaactcttTCTTGTTTTAATCCCGGTCTCATCTccacttcacttcacttcactgCCTGTCTgtcctgtctgtttttttatgttttttcttcaatGGAGGCTGAGGCACTTTACAGTTTCAGAGCGACTGAATGTGATGAGCTCAGTTTCCAGAAGGGTGACATCTTGaagGTGACAAACATGGATGACGATCCGAACTGGTACACGGCCGAGCTGTTTGGTAGGCGGGGATATGTACCGAAGAACTATATCAATGTAAGACCTCACACttACGGAGACCACGTGCAGCACTTTAAGGTTTTGAAAGATGGACTGGGGCAGTTCTTCATATGGGATGAAGTCTTCAGCTCTCTCAACCAGCTGGTGGACTTCTACAAAATCAACAGCATTGCCAAAGAGAGAACTGTGTTCCTGAAAGAGCCTGAGGGATCATTAGCTaggcCACGTCATGCCCATGCCCTCTTTGACTTCACATCCAATCATGCGACTCATCTACGTTTCTTGCGCGGTGACATCATAGACCTGCTCGACTGTTCGGATGCTCAGTGCTGGAGGGGCCGGTGCCGTGGAAGAGTGGGCGTGTTTCCACCAGAGTATGTGCAGCCAATTTATCACTGAATTTGTGTCACCATCCTGTACAGCCCAGACTCATTCATCACTCACGCATATTCTTCATAAATCTAAAGGTAAACTAAGCCTCATTCATCATTGTTTGGTGTATCAGGCgattatatttttaaggttCGAATTTAACCTCATGTCAAAGGTCAACCTTTGCCCATCCTCTTCTTTTTTGATCACTTTCAGAAGGCAAATTAGAAATCAGTTATAACTTGTCAACAAACCAGTTGTATAACACCTTTAATGAATATAACAATTGACTATTCAATGTCATCATCAGCCATTATCTGAGCTTCCTGTCTATTCTTCTTTCAAATACTTTAAAGTCCTTTCAAATAAAGGCATGCCATTAAAACTAGTATCAACACtgcatattttaattgtatttattgcttaatgttttatattgatACAgtgcaaaaaatgcattatcatGTCAGAAGTGAGCCAGAAATACTATGTTTCTTTTATGCAATATAAAGCTCTATatgtaaaacaattatatatatat

Function

symbol description
grapb Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 114. Orthologous to several human genes including GRAP (GRB2 related adaptor protein).

NR:

description
PREDICTED: GRB2-related adapter protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242245.1 False 1497 mRNA 0.42 5 5861028 5870757
XM_043242253.1 True 1544 mRNA 0.42 6 5861028 5870757
XM_043242263.1 False 1484 mRNA 0.42 5 5861027 5870757
XM_043242272.1 False 1531 mRNA 0.42 6 5861027 5870757
XM_043242280.1 False 1379 mRNA 0.40 4 5861026 5870757

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-9d4.3 si:dkeyp-9d4.3,LOC107701782,LOC107725391,LOC107722956,LOC107590702,LOC107564683,LOC108441467 coding downstream 27333 5792616 ~ 5833693 (-)
LOC122347093 NA coding downstream 71405 5784721 ~ 5789621 (-)
LOC122353693 NA coding downstream 83369 5777571 ~ 5777657 (-)
LOC122347131 LOC107725363,LOC107722975,LOC107590701,LOC103909971 coding downstream 84080 5770703 ~ 5776946 (-)
radil radil,LOC107722964,LOC107725399,LOC107564693,LOC107590699 coding downstream 94923 5746470 ~ 5766103 (-)
syngr3b syngr3b,LOC107692735,LOC107590758,LOC107722933,LOC107702512,LOC107565597,LOC107725368,LOC108441471 coding upstream 103712 5974469 ~ 5979703 (-)
zgc:112980 LOC107564628,LOC107692670,LOC107702537,LOC107722968,LOC107725351,LOC107590736 coding upstream 168798 6039555 ~ 6047809 (-)
ptcd1 LOC107692668,LOC107725401,LOC107722939,LOC107590737,LOC107565220,LOC107575409 coding upstream 184135 6054892 ~ 6059265 (-)
LOC122347124 NA coding upstream 201173 6071930 ~ 6073942 (-)
LOC122347076 NA coding upstream 203654 6074411 ~ 6078273 (-)
G1151 NA non-coding downstream 71107 5789667 ~ 5789919 (-)
G1146 NA non-coding downstream 82872 5777098 ~ 5778154 (-)
G1117 NA non-coding downstream 253108 5579526 ~ 5607918 (-)
G1124 LOC107701616,LOC107565289,LOC107705456,LOC107702505 non-coding downstream 294048 5561377 ~ 5566978 (-)
G1116 LOC107565289,LOC107701616,LOC107705456,LOC107590690,LOC107702505 non-coding downstream 300171 5560618 ~ 5560855 (-)
G1240 NA non-coding upstream 99633 5970390 ~ 5974062 (-)
G1246 NA non-coding upstream 149799 6020556 ~ 6020931 (-)
G1248 LOC107725398,LOC107692671,LOC107722970,LOC107722977,LOC107590704,LOC107564637,LOC107702540 non-coding upstream 161139 6031896 ~ 6033999 (-)
G1254 NA non-coding upstream 191599 6062356 ~ 6063185 (-)
G1257 NA non-coding upstream 195554 6066311 ~ 6067614 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other downstream 7777 5844144 ~ 5853249 (-)
mdh1b mdh1b other downstream 900816 4956119 ~ 4960210 (-)
G820 NA other downstream 1561833 4298310 ~ 4299193 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other downstream 1846739 4007840 ~ 4014287 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other downstream 2576240 3136508 ~ 3284786 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other upstream 240706 6111463 ~ 6113523 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other upstream 349847 6220604 ~ 6226114 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other upstream 396906 6267663 ~ 6274751 (-)
gng13a NA other upstream 456266 6327023 ~ 6328341 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other upstream 585287 6456044 ~ 6468254 (-)

Expression


Co-expression Network