LOC122347228


Basic Information

Item Value
gene id LOC122347228
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6545961 ~ 6547468 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242391.1
TACGCTTCCTTATGTTTTGCTCACCATTCTTGCACAAATATTGTGGGGGCGGGGCTAGCAGCAGCGTGTTTTCATTAGCTACTGAGTTTTTGATTGAcatcttttaatcattttatcagtatttttctGCTACTACACTACATCGTTGAGATGATTTCTCAGGAATAGCACAGCCAATGATATCATCATCCTTACTATTTTACAAGTGTGCTGTCAATCAACTTTAGCAATGTAAGCCTTTTTACATAATAcctttgaaaatacattttcaactaCCCCGTAACtaaaaaagcaatcaaattaGCCTACAGTAATGAGTTACTAAGTACTGCCCAACACTAAGACTTATTACTAAGTATACTTCCTGACACCTGCCAAACTGGCTTCACTGGACAATCAAGAAAGTAATAGTTTGCAAAATTATCTGtgttaacagtgtttttttacGTTCACACAGATGTGGTTAGAAGGAAGTTCATCCAGCTGGCACAGAGCAGCTTTGTAGGATTTCCTAATCTTCTGAAAATAGCAAagACTAAGATTGAAGCCATCAAGCAGGATAAAGAATCCCTGGCCGAATCCATGCTGAGAACCCAATTCAAGATGGAGCTCATTGTTTACAGTCAAGATGGCACGTACAGCCAGAGTCTGCAACATGCAAAGGACAAGCAGGACGAGAAAGAAGAAACTACTAAAAGCTTTAGCCCTTTGAGCATAGACCTAATAACCGACAATCATGCTACCTTGCGTGAGCTGAGCTTGCACCTTGAGTCATACTACAAGATTGCAAGCAAGCGTCTAGCTGACCAGATCCCGATGGTGATCCGCTATCTGCTGCTCCAGGAAGCAGCTTCGGAGCTGCAGAGGAACATGTTGCAGTTGCTGCATGATAGAGAAGATGTAGACCACCTGCTTAAAGAAGACTTTGACATCGGCCAAAAGCGGGAGAGCTTACTGAGTCGCCAGAAACGTCTGATGAAGGCACGCAGCCTCTTGGTTacctattaaaaataatttaaaaaaagggttaaGGAAAGGAAAGTATGAAATATATAGTATGGAGcacaaatatgcatatatgcaaatatgttatttcagttttggAATTTAACTCTTAATGAACAACATGGGGTGCATTTTCCCAATTAAAGATATCCATCATATTA

Function

GO:

id name namespace
GO:0009615 response to virus biological_process
GO:0046685 response to arsenic-containing substance biological_process
GO:0005737 cytoplasm cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242391.1 True 1166 mRNA 0.40 3 6545961 6547468

Neighbor

gene id symbol gene type direction distance location
micall2b LOC107564427,LOC107702520,LOC107590718,LOC107722924,LOC107692650,LOC107725362 coding downstream 93319 6439035 ~ 6452642 (-)
ubn1 LOC107692651,LOC107702522,LOC107725361,LOC107722945,LOC107590714 coding downstream 195460 6339847 ~ 6350501 (-)
zgc:136472 zgc:136472,LOC107692654,LOC107702524,LOC107572430,LOC107722945,LOC107590714 coding downstream 207642 6333937 ~ 6338319 (-)
LOC122342505 LOC107565181 coding downstream 215434 6329661 ~ 6330527 (-)
ern2 ern2,LOC107702527,LOC107722925,LOC107590742 coding downstream 233188 6299916 ~ 6312773 (-)
LOC122346971 ugt5b3,ugt5b4,LOC107564400,LOC107692647,LOC107714140 coding upstream 32736 6580204 ~ 6593716 (-)
LOC122346986 ugt5b1,LOC107692647,LOC107714140,LOC107564400 coding upstream 41589 6589057 ~ 6593789 (-)
LOC122346519 mad1l1,LOC107564387,LOC107722950,LOC107590744,LOC107714125 coding upstream 167277 6714745 ~ 6761771 (-)
c1h7orf26 LOC107714132,LOC107722952,LOC107663321,LOC107692723,LOC107565504 coding upstream 218594 6766062 ~ 6770577 (-)
pgap6 tmem8a,LOC107714144,LOC107692641,LOC107564383,LOC107722960,LOC107590745,LOC107663323 coding upstream 235065 6782533 ~ 6791869 (-)
LOC122347249 NA non-coding downstream 55768 6487644 ~ 6490193 (-)
G1398 NA non-coding downstream 132380 6413382 ~ 6413581 (-)
G1394 NA non-coding downstream 156324 6389420 ~ 6389637 (-)
G1288 NA non-coding downstream 327372 6218244 ~ 6218589 (-)
G1282 NA non-coding downstream 331414 6213641 ~ 6214547 (-)
G1499 fgb,LOC107665922,LOC107692638,LOC107714148,LOC107564337 non-coding upstream 234945 6782413 ~ 6839409 (-)
G1519 NA non-coding upstream 254826 6802294 ~ 6802755 (-)
G1528 NA non-coding upstream 306606 6854074 ~ 6854374 (-)
G1529 NA non-coding upstream 308327 6855795 ~ 6856108 (-)
G1531 NA non-coding upstream 310327 6857795 ~ 6858061 (-)
LOC122342514 NA other downstream 1403 6533501 ~ 6544558 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other downstream 77707 6456044 ~ 6468254 (-)
gng13a NA other downstream 217620 6327023 ~ 6328341 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other downstream 271210 6267663 ~ 6274751 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other downstream 319847 6220604 ~ 6226114 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other upstream 524121 7071589 ~ 7134282 (-)
G1642 NA other upstream 578174 7125642 ~ 7170022 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other upstream 656536 7204004 ~ 7295829 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other upstream 1944676 8492144 ~ 8500212 (-)
G1926 NA other upstream 2008572 8556040 ~ 8607795 (-)

Expression


Co-expression Network