cd247 (cd247)


Basic Information

Item Value
gene id cd247
gene name cd247
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2564546 ~ 2573977 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242553.1
GTGTACAGGTGGAGCTCGAGGAGCCACTTCCTGTCAGATCTCGAGCTTCTCtgaagtcacacacacacacacacacacacacacacacacacacactcgtgcgTCTGGAACCGAGCCCGTCACACGACAGACAGACGGAGGGATAAAGATGGCGTGGAGAGGAGGGTCAGCCGCGGTCATCCTGCTGTCCATCACACCTGTGTCAGcattATCAGCATACGACCCTAATTACTGTTACATCCTGGACGCCATCCTGCTGCTGTACGGAGTCATCATCACCGCCTTCTTCATACGAGAGAGAGTCAACAGGAAGAGAAGTAGAGGAGACCAGGACTCGCTGTATCAGccaatcagcaaGAACGCTCAGTCAGCGTATGACGTGCTGGGGGCCCGCGGGGCCGAGGAGGGGCCGGCCAGAGGGgctCGCAAGCGAGGAGACGACACATACACGCCTCTGCAGAAAAAGACTGACGACACGTACCGAGAGATCGAGGCCAAGCCGGGCCGGCGCCGGACCGATCAGGTTTATCAGggtttGAGCTCCGTGACTAAAGACACGTATGATTCTCTGCACATGCAGCAGATTCATCCTCCGCCGCGCTAAAGATGATCCTCGGCTGACCTTCAGAGCACAGTCCAGAGTGTTTCACAGCTCAGCTCTCGTCACACACACGTTCAGGAGAGTTAAACTCTTCACTCGAAACAGACCCGAAGACACAACGAAGTCTTTGAAACATGTAGATTTTAGATTCTAATTAGATGTCAAGTAATTAAGTACAAATACTTTGTTACCTTACACAAGTAAAAATTTTGGGTATCTATATTTTACTGGAAATTATTGTTCAGacaatttctaaaaaaaatagcCTCATTACTCCCATTTCATTCCGgcttgtcattaaaaaaaaggattttatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaatttagataaaaatataaataattcgATACAGTTTTTCAACGTATGCAGTATTTAAGCTAAAGATAGATGTAAAGTATTTGATTGTTAATGATGGGTCTGATCAGATATTAAttgctgtatatatattgaGTGCATTCATTAGTTACAGATCaaaattttctaaaataattgatAAGTTTCTGTGCCCCCTTCATTGCTGTGCTTTGTGGCTGATTTGTagatttagacaaaaaaaaaattacatcttttaatatatttttgaatattttgcattcatttcctATGATGGTCATTTTTATACGGAAGCCGTTTCCGACACTGAATAGAAAATAAAggtatataaagaaaataagtcagaattatgagatatataccatttattttgtatttattgtcgGAAACGCTCTTCTATATTTTTGACCCTAAACGAGTCCAGTGATGATCGTCCTGATGAAGAAGTGTTTTCTTACATCTGAAGACTGAGCGCTTTTTCTCAAACGAGTCGtttaactaataaa
>XM_043242561.1
tgtgtgtgtgtgtgtctgtgtgtgtgtgagtgtgagtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtatgtgtgagtgtgtgtgtgtgtgtgtgtgtgctggcaTTCACTACATTATAAAGATGTGCTCAGAGGTTCAGTAAAAGCAGTCAGTTTTAACCTCATTGGGACATGTTTTGGTCTGCATGAGGAAACAAGcattATCAGCATACGACCCTAATTACTGTTACATCCTGGACGCCATCCTGCTGCTGTACGGAGTCATCATCACCGCCTTCTTCATACGAGAGAGAGTCAACAGGAAGAGAAGTAGAGGAGACCAGGACTCGCTGTATCAGccaatcagcaaGAACGCTCAGTCAGCGTATGACGTGCTGGGGGCCCGCGGGGCCGAGGAGGGGCCGGCCAGAGGGgctCGCAAGCGAGGAGACGACACATACACGCCTCTGCAGAAAAAGACTGACGACACGTACCGAGAGATCGAGGCCAAGCCGGGCCGGCGCCGGACCGATCAGGTTTATCAGggtttGAGCTCCGTGACTAAAGACACGTATGATTCTCTGCACATGCAGCAGATTCATCCTCCGCCGCGCTAAAGATGATCCTCGGCTGACCTTCAGAGCACAGTCCAGAGTGTTTCACAGCTCAGCTCTCGTCACACACACGTTCAGGAGAGTTAAACTCTTCACTCGAAACAGACCCGAAGACACAACGAAGTCTTTGAAACATGTAGATTTTAGATTCTAATTAGATGTCAAGTAATTAAGTACAAATACTTTGTTACCTTACACAAGTAAAAATTTTGGGTATCTATATTTTACTGGAAATTATTGTTCAGacaatttctaaaaaaaatagcCTCATTACTCCCATTTCATTCCGgcttgtcattaaaaaaaaggattttatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaatttagataaaaatataaataattcgATACAGTTTTTCAACGTATGCAGTATTTAAGCTAAAGATAGATGTAAAGTATTTGATTGTTAATGATGGGTCTGATCAGATATTAAttgctgtatatatattgaGTGCATTCATTAGTTACAGATCaaaattttctaaaataattgatAAGTTTCTGTGCCCCCTTCATTGCTGTGCTTTGTGGCTGATTTGTagatttagacaaaaaaaaaattacatcttttaatatatttttgaatattttgcattcatttcctATGATGGTCATTTTTATACGGAAGCCGTTTCCGACACTGAATAGAAAATAAAggtatataaagaaaataagtcagaattatgagatatataccatttattttgtatttattgtcgGAAACGCTCTTCTATATTTTTGACCCTAAACGAGTCCAGTGATGATCGTCCTGATGAAGAAGTGTTTTCTTACATCTGAAGACTGAGCGCTTTTTCTCAAACGAGTCGtttaactaataaa

Function

symbol description
cd247 Predicted to enable transmembrane signaling receptor activity. Predicted to act upstream of or within cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in intestine; lymphocyte; ovary; and spleen. Human ortholog(s) of this gene implicated in immunodeficiency 25. Orthologous to human CD247 (CD247 molecule).

NR:

description
PREDICTED: T-cell surface glycoprotein CD3 zeta chain isoform X1

GO: NA

KEGG:

id description
K06453 CD3Z, CD247; CD3Z antigen, zeta polypeptide

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242553.1 False 1494 mRNA 0.41 8 2564546 2573977
XM_043242561.1 True 1495 mRNA 0.39 8 2570172 2573977

Neighbor

gene id symbol gene type direction distance location
creg1 creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633 coding upstream 127 2561357 ~ 2564419 (+)
adprhl1 adprhl1,LOC107694472 coding upstream 82987 2469473 ~ 2481559 (+)
gas6 gas6,LOC107694478,LOC107573434,LOC107751089 coding upstream 158259 2390877 ~ 2406287 (+)
pros1 pros1 coding upstream 176897 2371927 ~ 2387649 (+)
rasa3 rasa3 coding upstream 193411 2334161 ~ 2371135 (+)
gpa33a NA coding downstream 73450 2647427 ~ 2654848 (+)
LOC122351317 ildr2,LOC107662109,LOC107751053 coding downstream 82156 2656133 ~ 2676029 (+)
ildr1a LOC107751054,LOC107570078 coding downstream 104321 2678298 ~ 2690765 (+)
tmem39a tmem39a,LOC107662110,LOC107570077,LOC107551106,LOC107751086 coding downstream 117765 2691742 ~ 2700224 (+)
rpl24 rpl24,LOC107575619,LOC107551103,LOC107751658,LOC107662676,LOC107662117 coding downstream 165700 2739677 ~ 2742411 (+)
G505 LOC107751062,LOC107570084,LOC107694469,LOC107551096,LOC107747071 non-coding upstream 22237 2540487 ~ 2542309 (+)
G504 NA non-coding upstream 24145 2539233 ~ 2540401 (+)
G485 NA non-coding upstream 72669 2489483 ~ 2491877 (+)
G463 NA non-coding upstream 142899 2420476 ~ 2421647 (+)
G440 NA non-coding upstream 191390 2372715 ~ 2373156 (+)
G512 NA non-coding downstream 5339 2579316 ~ 2583647 (+)
G517 NA non-coding downstream 14468 2588445 ~ 2588673 (+)
G518 NA non-coding downstream 14710 2588687 ~ 2589008 (+)
G486 NA non-coding downstream 29214 2603191 ~ 2606077 (+)
G527 NA non-coding downstream 52068 2626045 ~ 2627404 (+)
setdb2 LOC107570068 other upstream 6019 2493572 ~ 2558527 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other upstream 37302 2524525 ~ 2527244 (+)
pcid2 pcid2 other upstream 46161 2511572 ~ 2518385 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 75443 2483640 ~ 2489103 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other upstream 372082 2185821 ~ 2192464 (+)
G482 dusp27 other downstream 20954 2594931 ~ 2596302 (+)
G727 NA other downstream 760681 3334658 ~ 3340876 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other downstream 1062730 3636707 ~ 3699093 (+)
G824 NA other downstream 1782721 4356698 ~ 4357260 (+)
G826 NA other downstream 1784030 4358007 ~ 4358296 (+)

Expression


Co-expression Network