LOC122350229 (gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC108414264,LOC100710496)


Basic Information

Item Value
gene id LOC122350229
gene name gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC108414264,LOC100710496
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2941770 ~ 3120820 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246568.1
gagggattGCTACTTTCTCTCCGCTgatagaaacacacagcagaagTTGAGAGCGCGCCGCTCCGGATCTATTCTGGAGGCTTCTCTGCTCTGCTCGCACACGCGTTCGTTCCGAGCGGATCCGTCGGAGAATTCTGCTATGAGCCGGATGCGACAGAAGGCGTGATTGATCATTGATGAGCGATTGCATGATTGAAACATTAGTCCACCTGCAGCTGGAGACGCCGGTGCGCTGAGCGCGTCTTGCGGGTTTTGCGCTTTTACGCATCGGCTGGATTTGCGCGCAGGAGGGATGTTGAAGACACCTGTCGTGGTTTTCACTTCTTTATCGCTGCTGTTGTCGCTGTCATGTGCTGGAGATGTAAAATCGCGCAGCTGCAGCGATGTGCGCCAGGCGTTCACGACCAAAGGCTTCAGTCTCCATAATGTGCCACATCAGGAGATATCAGGTGAACATCTGCGGGTCTGCTCCCAGGGCTACACCTGCTGCACTTCAGACATGGAGGACCGGCTCGGCCAGCAGAGCAAACTGGATTTCGAGAAATTAGTGGAAGAGAACAGCCACACCATTAGGACCATATTTACCTCCAGGCATAAAATGTTTGACGAATTCTTTCTGGAGTTGCTGGACAACTCGGAAAAGTCTCTGAACGACATGTTCGTGCGCACATACGGCAAACTGTACACGCACAACTCGGAGATGTTCGAGGACCTGTTCTCGGAGCTCAAGCGCTACTACACCGGCGGAAACGTCAACCTGGAGGAAGTGCTGAACGACTTCTGGTCCAGACTCCTGGAGCGCATGTTCCAGCTGCTCAACTCTCAGTACACCTTCACAGACGACTATCTGGAGTGCATCAGCAAGTACACCGACCAGTTAAAGCCCTTCGGAGACGTGCCACGCAAGCTCAAGGCTCAGGTCACCAAGGCCTTTATCGCGGCGCGCTCCTTCGTTCAAGGACTCATGGTGGGTCGGGAAGTGGCCAACAGAGTGGCAAAGGTCAATATATCTCCAGGTTGCAGTAAAGCACTGACTAAAATGCTGTACTGTCCGTACTGTGGAGGAATGCCAGGCCTCAAACCCTGCTCCAACTACTGCCAGAACGTCATGCGGGGCTGCCTGGCCAACCAAGCCGACCTGGACCCCGAGTGGAACCTCTTCATCGATGCCATGCTGCTGGTGGCTGACAGACTGGAAGGGCCCTTCAACATCGAGGCCGTCATGGAGCCCATAGATGTGAAGATCTCTGAGGCCATCATGGCCATGCAGGACAACAGCATGCAGGTTTCATCCAAGGTGTTTCAGGGATGCGGTCATCCCAAAGCAGCTGGAGTGGGCCGATCTGCCCGCGGGATCTCGGATGTGTTCAACAGTCGCTTCAGACCCTACAGTCCAGAAGAGAGGCCGACCACGGCAGCCGGCACCAGCCTGGACAGACTGAGGATTGTCTGGAGGACGATGCAAGACAGCGTGATCGACATTAAGGAGAAGCTGAAGGAGTCGAACAAATTCTGGTCGTCGCTGCCAGACGGCATCTGTGCAGAGGACGAAGTGACTGACCCAGATGAGGAGCAGTGCTGGAACAGTCACACAAAGGGAAGATACTTCCCTGAAGTTGTAAAAGACGGCCTGACGAACCAGCTCAACAACCCAGAGGTGGAAGTGGACATCACGAGACCGGACACCTTCATCAGACAGCAGATCATGACCCTGAGAGTGATGACCAACAAGCTGCGAAACGCTTACAACGGCAAAGACGTCTACTTCCAGGACTCCAGTGACGAGGAGAGCGGCTCGGGCAGCGGAAGCGGCTTCACCACGGAGCCAGAAGTGGTCCACACGGAGCCACCGATGCTGGAAGCAGACAAGAGCGACCCTCAGCCCCCGGCAGACGCGGCGGGCCCCCGGCAGACGCCCTCGCTGCGGTTACTCTCCGCCGGAACGGCCCTCAcgtggctgctgctgctgctgcggtgGAGATAATGGCAGGAGGCGGCACGCAGCCACACGGACGCATATGACAGAAGCAGCGTCGCTCGCGCTGTTAGCCTTTCCCTACCTGGACCGGacgttttccaaaaaaaaaaaatagcaagaaAAAGCCCATGAAAAAAGGAGAGCAAGCTAGCTAGCTAGACGTGAAGAGGAAACCTTTGCATCCTGCTTGTTCCAAAGAATGCTTGGTGCAATCAGAAGCCGACTGCTCTCGTTTCTAAATGaagttaaaagaaaagcaaacttTTGGGAAGGAAAAGCGGTCGCCGTGCTAAAGGGGGTCGCTTTTGCCTTTTCGGGAGAGAATGGGGAAATatgaaaatctatttttgttttccttttatacTGCATAAAGCGAGACGACGAAAAtacgctttttgtttttttttttcttttcgttttttttgtttgcgttACGCCCCTCCCGAGTTCATTAAAAGCAGAcgttataaagaaaaaaaaaagtaagaataaaaatctatatgAATCGACTTGTTTATGTACCACTGTGAGAATGCATGGGGAGGTCATGAGTAAATGTTTTCAACTGTGATTTCCACACAATTTTAACGCTTTACTCTTCCGttgaagtgtttttgttgttgttttgctcgGCTGACGGTCGTTTTCTAGGACCTGGGATGGCTTTGGGTGAGCGTGAAGGTCGAGTCTTACAGAGGGCTGCTCCTGCTTGATTCAAAATTAATGATCCATATCTtaatatataaaggttttagttataaaatgttttcttacagagaaagatttatttatatttctaatataattatatattttggctTTACCAGTTAGCAACTTTTATTCGAAAGCGCGTATCTAACAAAACAGCTCTTGCAAAAGAATGATGTTTTTTGCTCTTTCAAACCCAATAATTAATTTAACCaaggtcttttttttgtttcgttgtTTGTTTGGGATGTGCCTGAAACGGgctgctttaaaataactttctgATTTGggatagttttttttctattgaaaaGCCAGTGTTAAACCCGACTGATTCATGTTCCTTACGCTCGTTTATATATTCATCAATGTAATGGATTATGTATGCATAACCCTCATTTACttaacaaccttttttttttcagtttttatatgtAACCCGCCATATCATCGTTTCATGTATAAccatttgcatttacaaaattattttgttgtgAAACAGCAGGCCTCGTTTATGAAACTAAAGCCGGTAGCATTGCATTTCACCCtactgtgaatgggtgccgtcagaatgagtcgaacagctgataaaaacgtgAATGATAACAAGTCATCTTCTCTGAATCTCTGCGCTGTTTACGAGCTGAAACGGtttaaaacagctctaaacaaatatgtgagTGGATATTAATGTGAGAGACAACAGGAGATGTTTTTTTCACTCAAATTTAGTCCTGAAGCAAAGGTTTCGACttaaatgatggatttgtttcttacgaACTAATAGCCTCCCTCTTCACAAGGGCCGGAGTTAtagagatgtttttttatcagctgtttgggctctcgttctgacggcacccattcactgcagggcatCCGTGAAGCAATGCTACATTTATCCAAATCTGTCGAAACATCTACACCCGCTTAATTTTATAACTTtagtttttgagtgaactacgCCTTGATTTTAAACCGCgttcaaaacatatatatatatatatatatatatatacgatttACATTGTTCTGCTTATGTTTCACGAACGAGGCCCATTGAGTCGCTTAGAATGTTATAAGAGCACTTTCTTGGTTTGACTTGTATCTGTAGTTATGAATGTTCCCAATCCAGCGCTATTCAAATACATCGAGCAAACCGACAGAATTAGCGGTTTAATGGCTCAGACCTCCCGTTATGAATGCTGGCATGTGTTAATGTATCGTTTAATGACAGCTTCTCCAAACAACTCTTTGGTTTATGGAAGGACGCCGTGCATTCATCCGGAACCATAAAGCTGCGCTTTATGTTGAGAGCCGCCTGCTCATGCATCACGCTCTTGTCATCACTGAAATGCAAAGATGCTAAAAGATCCTCTAATGTTCTTTTCTCAGAGATGCGTGAAGGTTGAATTAAAGTGCGGGGTGGCGTGTGGAATATAGACGCGCAAACAGCTTCGGAAATGAAACGCGAGAGAGTCCGGCGACGCTCCACTGCGTCTGGTATTTGAAGGCAGGACAGGTAGCAGAAGACGATGTGCTTTTTGCTCATGCCTGGGTACTTTTGTCTTCCCAGAAAGGCTCAGAAAGCATCTCGTGGGTTTTGGAAATGAGAAATTCAGTGAGCCAAGAGAGAGGGCACGTTGAGGAAAGGTCGAACACATAGCTGTgtcttaaagtcaacatgaagtCAGATTTTAAATCCTATTCACTGTAACATCTTCCTAGCCCTTGTGCCGTGCAGAACATCCTAGTTTGGTGTTCCTCATCCAAAAAAACGACATTTGCATTGCTTGTAAATCTGTCACTGTGCTCTATTATCACCAGGGACctcatttagaaaatgttgcGTAGAAACCATGCTAAATGTGATCTTGCGACCATTTTTCGTATGAACGTATAAACGAGAAAACCCGAGTACGCCTCTCTTTCGGGTGTGAAATCTGTTCATCTCAAAGGACCTTGAACTTGCGCGCAAATAAATGGTTTCGGCTCTCCGTCTTtctaattaatgtcattaacgCAAAACCTCACCGATCATCATAATTTGCAGCAGCGAGCGGCAGGAACTCTTTAcgttttcaaaaacctgcaatactCCCAATAAAAAATGCACACGTCTGCTCAGACCCTGACATTGGCGTGGTTTTAAGTATAAGCACACTCTACGATCAAATCTGTGCATGCGCACGCTGTATAAATAAGGCCCTAGATcttatattcaatatttttgccttttttgctttttagcaCAGGTTTGATTGGTTTGGTTGagtaaatattactaaaactacacacaattattttctttttatatatatcatgtttcataaatatgatatttggcataaaataatatgttttttttttttaccatttttacatctattttaaaattgtcGCGCCTAAAAGttatctagttttttttttttgttcggtCGTTTTTTACTTCCTCGTTGAACTTGTTGTGTTCCTGGTCAAAAAAGACTAGCCTACATGAACAGGGACACCTCCGAGTTTAATGAGGagcttaaaggaaaaaacaaaaaactcagAACCGGGAGAGACAATGCTTAAACATTAactttgttttttggtttttggtttttaatcaaattcGCTGCAGGTCAAAATGACAAGAACACAACATAAGGGCTAAAATTCGCTTTAAAATCGTGTTTTTCTCACTTAAAGGGAGCATAATCGGTCaattcatgttgactttaagtgTTAGGTGTGAACGCCGAAGAatgcagaagaagaaaaaaacacaaacggCGTAATTCATGAATGCTCTTCAGACGAAAACTTTACTTCAAGGAAGTCGAAAGTGGTTGAGGGTCTCAAATGGGCTGGTTGCTATATACAGTGGATCACGAAGGGGCAAGTTAACGCAAAAACTGCCGTTTTTCTCTTCCATTGCCCTCCGTTCTCGTGCGCTCCTGTCAGAATCCGAAGACGAAGCATGTCATGTAAAACTTTTCCTAATAGCTTGCGTGTTTCTACTTGTGGTCTGAATGTATTTGGCTTTTCTCTGATGATACCGATTGAACGGTATCGCCTATTTTATCGGTCTCGGAGGATGCGAAGACTAAGCCGTCCATCCGTCAAAACGGACAcgtggtttttattttttcacgtCGTAATGTGTTTGATGGATACAAACCAGATCCAGGCACTCCGAGCGAATCTGTTTCTATGcgttttgctttctttttccaCATTGCACTTTGAAATTGAGTTCCACATTTAGATCTTTATATGAGTGacgaaacaagaaaaaaaaaagaaaaacgtttaCATGTAAACAAGTACAAGCCATGTCAAATACATGTTCGAAACACTTTGAGAAGATTGTGGTCTGAAAGTGAACGTTGTTCCTACTGAAGCACGCTGCTTTGAGCTACTATAGGTGAAGTTTTAATGCGACGTTTATGTCGTGCAAGCAGACATGCcttacagtttgtttgttttcttttttttaaagaaaaaaaaagtactaaatgGATTGCATATTTGGATTTTGTTACTCTCTCATATATACGGACAAGTAATGAAGGggtgcaaataaacattttatatataaaaaaa
>XM_043246576.1
gagggattGCTACTTTCTCTCCGCTgatagaaacacacagcagaagTTGAGAGCGCGCCGCTCCGGATCTATTCTGGAGGCTTCTCTGCTCTGCTCGCACACGCGTTCGTTCCGAGCGGATCCGTCGGAGAATTCTGCTATGAGCCGGATGCGACAGAAGGCGTGATTGATCATTGATGAGCGATTGCATGATTGAAACATTAGTCCACCTGCAGCTGGAGACGCCGGTGCGCTGAGCGCGTCTTGCGGGTTTTGCGCTTTTACGCATCGGCTGGATTTGCGCGCAGGAGGGATGTTGAAGACACCTGTCGTGGTTTTCACTTCTTTATCGCTGCTGTTGTCGCTGTCATGTGCTGGAGATGTAAAATCGCGCAGCTGCAGCGATGTGCGCCAGGCGTTCACGACCAAAGGCTTCAGTCTCCATAATGTGCCACATCAGGAGATATCAGGTGAACATCTGCGGGTCTGCTCCCAGGGCTACACCTGCTGCACTTCAGACATGGAGGACCGGCTCGGCCAGCAGAGCAAACTGGATTTCGAGAAATTAGTGGAAGAGAACAGCCACACCATTAGGACCATATTTACCTCCAGGCATAAAATGTTTGACGAATTCTTTCTGGAGTTGCTGGACAACTCGGAAAAGTCTCTGAACGACATGTTCGTGCGCACATACGGCAAACTGTACACGCACAACTCGGAGATGTTCGAGGACCTGTTCTCGGAGCTCAAGCGCTACTACACCGGCGGAAACGTCAACCTGGAGGAAGTGCTGAACGACTTCTGGTCCAGACTCCTGGAGCGCATGTTCCAGCTGCTCAACTCTCAGTACACCTTCACAGACGACTATCTGGAGTGCATCAGCAAGTACACCGACCAGTTAAAGCCCTTCGGAGACGTGCCACGCAAGCTCAAGGCTCAGGTCACCAAGGCCTTTATCGCGGCGCGCTCCTTCGTTCAAGGACTCATGGTGGGTCGGGAAGTGGCCAACAGAGTGGCAAAGGTCAATATATCTCCAGGTTGCAGTAAAGCACTGACTAAAATGCTGTACTGTCCGTACTGTGGAGGAATGCCAGGCCTCAAACCCTGCTCCAACTACTGCCAGAACGTCATGCGGGGCTGCCTGGCCAACCAAGCCGACCTGGACCCCGAGTGGAACCTCTTCATCGATGCCATGCTGCTGGTGGCTGACAGACTGGAAGGGCCCTTCAACATCGAGGCCGTCATGGAGCCCATAGATGTGAAGATCTCTGAGGCCATCATGGCCATGCAGGACAACAGCATGCAGGTTTCATCCAAGGTGTTTCAGGGATGCGGTCATCCCAAAGCAGCTGGAGTGGGCCGATCTGCCCGCGGGATCTCGGATGTGTTCAACAGTCGCTTCAGACCCTACAGTCCAGAAGAGAGGCCGACCACGGCAGCCGGCACCAGCCTGGACAGACTGGTGATCGACATTAAGGAGAAGCTGAAGGAGTCGAACAAATTCTGGTCGTCGCTGCCAGACGGCATCTGTGCAGAGGACGAAGTGACTGACCCAGATGAGGAGCAGTGCTGGAACAGTCACACAAAGGGAAGATACTTCCCTGAAGTTGTAAAAGACGGCCTGACGAACCAGCTCAACAACCCAGAGGTGGAAGTGGACATCACGAGACCGGACACCTTCATCAGACAGCAGATCATGACCCTGAGAGTGATGACCAACAAGCTGCGAAACGCTTACAACGGCAAAGACGTCTACTTCCAGGACTCCAGTGACGAGGAGAGCGGCTCGGGCAGCGGAAGCGGCTTCACCACGGAGCCAGAAGTGGTCCACACGGAGCCACCGATGCTGGAAGCAGACAAGAGCGACCCTCAGCCCCCGGCAGACGCGGCGGGCCCCCGGCAGACGCCCTCGCTGCGGTTACTCTCCGCCGGAACGGCCCTCAcgtggctgctgctgctgctgcggtgGAGATAATGGCAGGAGGCGGCACGCAGCCACACGGACGCATATGACAGAAGCAGCGTCGCTCGCGCTGTTAGCCTTTCCCTACCTGGACCGGacgttttccaaaaaaaaaaaatagcaagaaAAAGCCCATGAAAAAAGGAGAGCAAGCTAGCTAGCTAGACGTGAAGAGGAAACCTTTGCATCCTGCTTGTTCCAAAGAATGCTTGGTGCAATCAGAAGCCGACTGCTCTCGTTTCTAAATGaagttaaaagaaaagcaaacttTTGGGAAGGAAAAGCGGTCGCCGTGCTAAAGGGGGTCGCTTTTGCCTTTTCGGGAGAGAATGGGGAAATatgaaaatctatttttgttttccttttatacTGCATAAAGCGAGACGACGAAAAtacgctttttgtttttttttttcttttcgttttttttgtttgcgttACGCCCCTCCCGAGTTCATTAAAAGCAGAcgttataaagaaaaaaaaaagtaagaataaaaatctatatgAATCGACTTGTTTATGTACCACTGTGAGAATGCATGGGGAGGTCATGAGTAAATGTTTTCAACTGTGATTTCCACACAATTTTAACGCTTTACTCTTCCGttgaagtgtttttgttgttgttttgctcgGCTGACGGTCGTTTTCTAGGACCTGGGATGGCTTTGGGTGAGCGTGAAGGTCGAGTCTTACAGAGGGCTGCTCCTGCTTGATTCAAAATTAATGATCCATATCTtaatatataaaggttttagttataaaatgttttcttacagagaaagatttatttatatttctaatataattatatattttggctTTACCAGTTAGCAACTTTTATTCGAAAGCGCGTATCTAACAAAACAGCTCTTGCAAAAGAATGATGTTTTTTGCTCTTTCAAACCCAATAATTAATTTAACCaaggtcttttttttgtttcgttgtTTGTTTGGGATGTGCCTGAAACGGgctgctttaaaataactttctgATTTGggatagttttttttctattgaaaaGCCAGTGTTAAACCCGACTGATTCATGTTCCTTACGCTCGTTTATATATTCATCAATGTAATGGATTATGTATGCATAACCCTCATTTACttaacaaccttttttttttcagtttttatatgtAACCCGCCATATCATCGTTTCATGTATAAccatttgcatttacaaaattattttgttgtgAAACAGCAGGCCTCGTTTATGAAACTAAAGCCGGTAGCATTGCATTTCACCCtactgtgaatgggtgccgtcagaatgagtcgaacagctgataaaaacgtgAATGATAACAAGTCATCTTCTCTGAATCTCTGCGCTGTTTACGAGCTGAAACGGtttaaaacagctctaaacaaatatgtgagTGGATATTAATGTGAGAGACAACAGGAGATGTTTTTTTCACTCAAATTTAGTCCTGAAGCAAAGGTTTCGACttaaatgatggatttgtttcttacgaACTAATAGCCTCCCTCTTCACAAGGGCCGGAGTTAtagagatgtttttttatcagctgtttgggctctcgttctgacggcacccattcactgcagggcatCCGTGAAGCAATGCTACATTTATCCAAATCTGTCGAAACATCTACACCCGCTTAATTTTATAACTTtagtttttgagtgaactacgCCTTGATTTTAAACCGCgttcaaaacatatatatatatatatatatatatatacgatttACATTGTTCTGCTTATGTTTCACGAACGAGGCCCATTGAGTCGCTTAGAATGTTATAAGAGCACTTTCTTGGTTTGACTTGTATCTGTAGTTATGAATGTTCCCAATCCAGCGCTATTCAAATACATCGAGCAAACCGACAGAATTAGCGGTTTAATGGCTCAGACCTCCCGTTATGAATGCTGGCATGTGTTAATGTATCGTTTAATGACAGCTTCTCCAAACAACTCTTTGGTTTATGGAAGGACGCCGTGCATTCATCCGGAACCATAAAGCTGCGCTTTATGTTGAGAGCCGCCTGCTCATGCATCACGCTCTTGTCATCACTGAAATGCAAAGATGCTAAAAGATCCTCTAATGTTCTTTTCTCAGAGATGCGTGAAGGTTGAATTAAAGTGCGGGGTGGCGTGTGGAATATAGACGCGCAAACAGCTTCGGAAATGAAACGCGAGAGAGTCCGGCGACGCTCCACTGCGTCTGGTATTTGAAGGCAGGACAGGTAGCAGAAGACGATGTGCTTTTTGCTCATGCCTGGGTACTTTTGTCTTCCCAGAAAGGCTCAGAAAGCATCTCGTGGGTTTTGGAAATGAGAAATTCAGTGAGCCAAGAGAGAGGGCACGTTGAGGAAAGGTCGAACACATAGCTGTgtcttaaagtcaacatgaagtCAGATTTTAAATCCTATTCACTGTAACATCTTCCTAGCCCTTGTGCCGTGCAGAACATCCTAGTTTGGTGTTCCTCATCCAAAAAAACGACATTTGCATTGCTTGTAAATCTGTCACTGTGCTCTATTATCACCAGGGACctcatttagaaaatgttgcGTAGAAACCATGCTAAATGTGATCTTGCGACCATTTTTCGTATGAACGTATAAACGAGAAAACCCGAGTACGCCTCTCTTTCGGGTGTGAAATCTGTTCATCTCAAAGGACCTTGAACTTGCGCGCAAATAAATGGTTTCGGCTCTCCGTCTTtctaattaatgtcattaacgCAAAACCTCACCGATCATCATAATTTGCAGCAGCGAGCGGCAGGAACTCTTTAcgttttcaaaaacctgcaatactCCCAATAAAAAATGCACACGTCTGCTCAGACCCTGACATTGGCGTGGTTTTAAGTATAAGCACACTCTACGATCAAATCTGTGCATGCGCACGCTGTATAAATAAGGCCCTAGATcttatattcaatatttttgccttttttgctttttagcaCAGGTTTGATTGGTTTGGTTGagtaaatattactaaaactacacacaattattttctttttatatatatcatgtttcataaatatgatatttggcataaaataatatgttttttttttttaccatttttacatctattttaaaattgtcGCGCCTAAAAGttatctagttttttttttttgttcggtCGTTTTTTACTTCCTCGTTGAACTTGTTGTGTTCCTGGTCAAAAAAGACTAGCCTACATGAACAGGGACACCTCCGAGTTTAATGAGGagcttaaaggaaaaaacaaaaaactcagAACCGGGAGAGACAATGCTTAAACATTAactttgttttttggtttttggtttttaatcaaattcGCTGCAGGTCAAAATGACAAGAACACAACATAAGGGCTAAAATTCGCTTTAAAATCGTGTTTTTCTCACTTAAAGGGAGCATAATCGGTCaattcatgttgactttaagtgTTAGGTGTGAACGCCGAAGAatgcagaagaagaaaaaaacacaaacggCGTAATTCATGAATGCTCTTCAGACGAAAACTTTACTTCAAGGAAGTCGAAAGTGGTTGAGGGTCTCAAATGGGCTGGTTGCTATATACAGTGGATCACGAAGGGGCAAGTTAACGCAAAAACTGCCGTTTTTCTCTTCCATTGCCCTCCGTTCTCGTGCGCTCCTGTCAGAATCCGAAGACGAAGCATGTCATGTAAAACTTTTCCTAATAGCTTGCGTGTTTCTACTTGTGGTCTGAATGTATTTGGCTTTTCTCTGATGATACCGATTGAACGGTATCGCCTATTTTATCGGTCTCGGAGGATGCGAAGACTAAGCCGTCCATCCGTCAAAACGGACAcgtggtttttattttttcacgtCGTAATGTGTTTGATGGATACAAACCAGATCCAGGCACTCCGAGCGAATCTGTTTCTATGcgttttgctttctttttccaCATTGCACTTTGAAATTGAGTTCCACATTTAGATCTTTATATGAGTGacgaaacaagaaaaaaaaaagaaaaacgtttaCATGTAAACAAGTACAAGCCATGTCAAATACATGTTCGAAACACTTTGAGAAGATTGTGGTCTGAAAGTGAACGTTGTTCCTACTGAAGCACGCTGCTTTGAGCTACTATAGGTGAAGTTTTAATGCGACGTTTATGTCGTGCAAGCAGACATGCcttacagtttgtttgttttcttttttttaaagaaaaaaaaagtactaaatgGATTGCATATTTGGATTTTGTTACTCTCTCATATATACGGACAAGTAATGAAGGggtgcaaataaacattttatatataaaaaaa

Function

symbol description
gpc6a Predicted to be involved in several processes, including regulation of neurotransmitter receptor localization to postsynaptic specialization membrane; regulation of presynapse assembly; and synaptic membrane adhesion. Predicted to act upstream of or within regulation of signal transduction. Predicted to be located in collagen-containing extracellular matrix and membrane. Predicted to be anchored component of plasma membrane. Predicted to be active in cell surface and synapse. Is expressed in blastomere and nervous system. Human ortholog(s) of this gene implicated in omodysplasia 1. Orthologous to human GPC6 (glypican 6).

NR:

description
PREDICTED: glypican-6-like isoform X1

GO:

id name namespace
GO:0031225 anchored component of membrane cellular_component
GO:0005886 plasma membrane cellular_component
GO:0043395 heparan sulfate proteoglycan binding molecular_function

KEGG:

id description
K08112 GPC6; glypican 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246568.1 True 6277 mRNA 0.44 10 2941770 3120820
XM_043246576.1 False 6247 mRNA 0.44 9 2941770 3120820

Neighbor

gene id symbol gene type direction distance location
LOC122328837 gpc6a,LOC107730398,LOC107744956,LOC107553997,LOC105911916,LOC103365236 coding upstream 159586 2758083 ~ 2782184 (+)
rpl24 rpl24,LOC107575619,LOC107551103,LOC107751658,LOC107662676,LOC107662117 coding upstream 199359 2739677 ~ 2742411 (+)
LOC122353699 NA coding upstream 199558 2742079 ~ 2742212 (+)
tmem39a tmem39a,LOC107662110,LOC107570077,LOC107551106,LOC107751086 coding upstream 241546 2691742 ~ 2700224 (+)
ildr1a LOC107751054,LOC107570078 coding upstream 251005 2678298 ~ 2690765 (+)
slitrk6 slitrk6,LOC107674010,LOC107558904,LOC107730399,LOC107574216,LOC107737039,LOC107698122 coding downstream 683779 3804599 ~ 3817996 (+)
LOC122352357 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 coding downstream 886955 4007775 ~ 4011370 (+)
LOC122342374 erbb4a,LOC107674013,LOC107725343,LOC107556266,LOC108440448,LOC107557316,LOC107707608 coding downstream 1100463 4221283 ~ 4232503 (+)
spry2 spry2,LOC107549433,LOC107750630,LOC107674014,LOC107676062,LOC107750049,LOC107556294 coding downstream 1374374 4495194 ~ 4499239 (+)
tuba8l2 tuba8l2,LOC107750365,LOC107556293,LOC103042625,LOC108411703,LOC107549435 coding downstream 1427632 4548452 ~ 4554686 (+)
G546 NA non-coding upstream 211050 2726300 ~ 2730720 (+)
G538 NA non-coding upstream 220847 2703522 ~ 2720923 (+)
G527 NA non-coding upstream 314366 2626045 ~ 2627404 (+)
G486 NA non-coding upstream 335693 2603191 ~ 2606077 (+)
G518 NA non-coding upstream 352762 2588687 ~ 2589008 (+)
G719 NA non-coding downstream 165129 3285949 ~ 3286202 (+)
G771 NA non-coding downstream 599444 3720264 ~ 3720539 (+)
LOC122341420 NA non-coding downstream 899277 4020097 ~ 4024338 (+)
LOC122346127 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 non-coding downstream 1088589 4209409 ~ 4218600 (+)
LOC122346159 LOC107557315,LOC107705456,LOC107725343,LOC107707608,LOC107674013,LOC107667809,LOC107556266 non-coding downstream 1098422 4219242 ~ 4221288 (+)
G482 dusp27 other upstream 345468 2594931 ~ 2596302 (+)
setdb2 LOC107570068 other upstream 383243 2493572 ~ 2558527 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other upstream 414526 2524525 ~ 2527244 (+)
pcid2 pcid2 other upstream 423385 2511572 ~ 2518385 (+)
grtp1a grtp1,grtp1a,LOC107571994 other upstream 452667 2483640 ~ 2489103 (+)
G727 NA other downstream 213838 3334658 ~ 3340876 (+)
G749 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 other downstream 515887 3636707 ~ 3699093 (+)
G824 NA other downstream 1235878 4356698 ~ 4357260 (+)
G826 NA other downstream 1237187 4358007 ~ 4358296 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other downstream 1817361 4938181 ~ 4944841 (+)

Expression


Co-expression Network