gas6 (gas6,LOC107694478,LOC107573434,LOC107751089)


Basic Information

Item Value
gene id gas6
gene name gas6,LOC107694478,LOC107573434,LOC107751089
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2390877 ~ 2406287 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246771.1
ACCAGTCCCCATTCGCTGGCGTACGACGCAGAGCAGCCCGAACATTCTGCTGagcttcttcttttgttctgcaCCGAAACAGAAAGTCTCCGAGGCTCTGAAGGACACGTCGAGGGCATGTAAACCACGCTAGGGTTCGTTTTTTGGGCGATCTATCGCTTTAAAGGCATCTTTTCCCGGCGCTCGTGTAGAAAGCACTGCAGTGATCTGCTATTGCGGAGGAAAATTCTGCATCGGGAACTCCCTGCGTAGAGCAACTTTCACCAATAAACCGACGAATCTGCCGCTCAcgtttagagagagagagagacagagagagagaggagagagagagagaggcttgaACGTGCTGCAGAAACGCTGCTGTTCTGCTCTGAATGTGGCGGCTCAGTGCAGGATTGTGATCCACAACGAGCCAAAGTTTGACGCAGAACCAACATGAGAGAGTTCGTGTGCTTCGTGCTGCTGTGTGTCGGCTGCTCCTCGCCTCTGTCCGTGTCTCCGGAGGAGGCGAGCGAGTTCCTCCGCAGACACCGGAGAGCCAACCAGGTGTTCGAGGAGACCAAGCAGGGTCATCTGGAGAGGGAGTGTGTGGAGGAGAGGTGCACTAAAGAGGAGGCGAGGGAAGTGTTCGAGAATGACCCTGAGACGGAGTATTTCTACCCGAAGTATCAGGCGTGTATGGAGAGGTTTGGAGACTCTGAGAAGAAGAAGCAGGATCTGATCACGTGTGTCCACAaCATTCCAGACCAGTGTTCTCCTAACCCCTGTAATCATTACGGTACGGTGCGCTGTGAGGACAAAAAGGGCGAGTTCCAGTGTCATTGTTTCACAGGATGGAGTGGTGTCAGGTGTGAGAAAGATGTGGATGAGTGCAGCAGAGCAAACGCAGGATGTGAGCACCACTGTAACAACACCATGGGCAGTTACCGCTGCTCCTGTCGTCATGGATACACGCTCTCGGGTCACCACACGTGTCTGGATGTGGACGAGTGTGTGAAGACTCCAGACATCTGTGGATCCGCTCGCTGCTCGAACCTCGACGGGAGCCACGACTGCTTGTGTGACGACGGCTTCGTCTACGACAACATCTCCAAGAGCTGTGTAGACGTGGACGAGTGTGAGACGGATGTGTGTGAGGAGGAGTGTGTGAACACACCCGGGAGCTTCCGCTGCTACTGTGACGGACGACAGGGGAAGAGACTGGGACGAGACTTCAGGAGCTGTGAGCCCATCGAGCTTCACCGGTCGCTGGACCTGAGGAGGAACCCTCGCTCTCTGTACCTCGGACGCATGTTCAGCGGGATCCCTGTGGTACGACTGCGCTTCCGCCGCAGGGTTCACACCGGGTTCACGGCAGAGTTTGATCTCAGGACCTACGACCCTGAGGGCGTGATCTTCTTCGCCGGTGGCCACTTGAACAGCTCCTGGATTGTTCTAGTGATGCATTATGGGAAGCTGGAGCTGCAGCTGAAGTACGGAGCTGTGAGTCGAGTGACCAGCAGTGGACCGCAGGTCAACGACGGCCAGTGGCacaagATCTCGGTGGAGGAGCAGGGGCGGAGCCTCGTCATCAAGATTGACAGGGAGGCGGTGATGAAGATCGCGGTCAACGGAGATCTGTTCACGCTGAATAAAGGCATGCATGAGCTCAACCTGACGGTGGGCGGCGTTCCCTTCAGAGACGACGGACTGGTCAGCAGGATTAACCCTCGCCTGGACGGCTGCATGAAGGACTGGCGCTGGTTGACCGGTGAGGACACGTCCATCCAGGACACCGTCCAGAACAACGAGCGCATGCAGTGTTACGCCGTCGAGGACCACAGCGCCTTCTACCCCGGACACGGCTTCGTCTTCTTCAACCACAGCCACGGAGACAATCAGACTCTCAGTGTCCATGTGACCCTGCGCCCGGTCTCCTCTGTAGGCGTCCTGTTTGCTCTGGTTCGTCAGGACAGAGTCCCgttctccatctctctgtccGACTATCATCCAGGAACACTCAACTGGaccgagCACGTGCTGGTGTCTTTCGGGGACGTGGTGGCGCTCAGTGTCCCGGTCGCTCTGTGTGACGGTCAGACCCACACGCTCAACGTGACTGTGTTGGGGAACAGCTCTCTGCTGGAGGTGGACGGGCAGCCGGCGCAGACGGAGGGGACGGAGAGCGCAGACGCTCTGGATCTGACGGCGTCTTACAGCACCTTCATAGGAGGCCTTCCTGACGTGTCTCTGGTGTCCGCGCCGGTCTCGGCCTTCTTCACGGGCTGCATGGACGTGCGGGTGAACGGTCAGCTGCTGGACGTGGACGAGGCCCAGCACAAACACAACGACGTCCGCTCTCACTCCTGCCCTCTGCTGGACGCACAGCAATAACAGCAGCTGACGCTCCGCACATACAGCACAGAGCCGCTAGACATGTATTACCCGCTTTAGACCAATCAAACACAAGCTACTGAGAGCGTGCTGTGAGATACTGTAACTGTACATAGGCCACTGTAAAATGCTTTAGAGGAGGATGACTAAAAACACCCGACTACCATTAAAGGCCTTCAGGCTTGATGTAGGTGCTCaacttcatcatcatcatcatcatcatcatcatcgttcGGGGTAGTTAGAGTTTTTTTTAGTCCTTCGTTCGagtttgtctttttattgttgaagttttatattttgttcatgTATGCTTTGTGTGTGAGACTGAAACTAATAAAGGCGGATGGTGTtgttatgatga
>XM_043246780.1
CCCATTCGCTGGCGTACGACGCAGAGCAGCCCGAACATTCTGCTGagcttcttcttttgttctgcaCCGAAACAGAAAGTCTCCGAGGCTCTGAAGGACACGTCGAGGGCATGTAAACCACGCTAGGGTTCGTTTTTTGGGCGATCTATCGCTTTAAAGGCATCTTTTCCCGGCGCTCGTGTAGAAAGCACTGCAGTGATCTGCTATTGCGGAGGAAAATTCTGCATCGGGAACTCCCTGCGTAGAGCAACTTTCACCAATAAACCGACGAATCTGCCGCTCAcgtttagagagagagagagacagagagagagaggagagagagagagaggcttgaACGTGCTGCAGAAACGCTGCTGTTCTGCTCTGAATGTGGCGGCTCAGTGCAGGATTGTGATCCACAACGAGCCAAAGTTTGACGCAGAACCAACATGAGAGAGTTCGTGTGCTTCGTGCTGCTGTGTGTCGGCTGCTCCTCGCCTCGAGTATTTCTACCCGAAGTATCAGGCGTGTATGGAGAGGTTTGGAGACTCTGAGAAGAAGAAGCAGGATCTGATCACGTGTGTCCACAaCATTCCAGACCAGTGTTCTCCTAACCCCTGTAATCATTACGGTACGGTGCGCTGTGAGGACAAAAAGGGCGAGTTCCAGTGTCATTGTTTCACAGGATGGAGTGGTGTCAGGTGTGAGAAAGATGTGGATGAGTGCAGCAGAGCAAACGCAGGATGTGAGCACCACTGTAACAACACCATGGGCAGTTACCGCTGCTCCTGTCGTCATGGATACACGCTCTCGGGTCACCACACGTGTCTGGATGTGGACGAGTGTGTGAAGACTCCAGACATCTGTGGATCCGCTCGCTGCTCGAACCTCGACGGGAGCCACGACTGCTTGTGTGACGACGGCTTCGTCTACGACAACATCTCCAAGAGCTGTGTAGACGTGGACGAGTGTGAGACGGATGTGTGTGAGGAGGAGTGTGTGAACACACCCGGGAGCTTCCGCTGCTACTGTGACGGACGACAGGGGAAGAGACTGGGACGAGACTTCAGGAGCTGTGAGCCCATCGAGCTTCACCGGTCGCTGGACCTGAGGAGGAACCCTCGCTCTCTGTACCTCGGACGCATGTTCAGCGGGATCCCTGTGGTACGACTGCGCTTCCGCCGCAGGGTTCACACCGGGTTCACGGCAGAGTTTGATCTCAGGACCTACGACCCTGAGGGCGTGATCTTCTTCGCCGGTGGCCACTTGAACAGCTCCTGGATTGTTCTAGTGATGCATTATGGGAAGCTGGAGCTGCAGCTGAAGTACGGAGCTGTGAGTCGAGTGACCAGCAGTGGACCGCAGGTCAACGACGGCCAGTGGCacaagATCTCGGTGGAGGAGCAGGGGCGGAGCCTCGTCATCAAGATTGACAGGGAGGCGGTGATGAAGATCGCGGTCAACGGAGATCTGTTCACGCTGAATAAAGGCATGCATGAGCTCAACCTGACGGTGGGCGGCGTTCCCTTCAGAGACGACGGACTGGTCAGCAGGATTAACCCTCGCCTGGACGGCTGCATGAAGGACTGGCGCTGGTTGACCGGTGAGGACACGTCCATCCAGGACACCGTCCAGAACAACGAGCGCATGCAGTGTTACGCCGTCGAGGACCACAGCGCCTTCTACCCCGGACACGGCTTCGTCTTCTTCAACCACAGCCACGGAGACAATCAGACTCTCAGTGTCCATGTGACCCTGCGCCCGGTCTCCTCTGTAGGCGTCCTGTTTGCTCTGGTTCGTCAGGACAGAGTCCCgttctccatctctctgtccGACTATCATCCAGGAACACTCAACTGGaccgagCACGTGCTGGTGTCTTTCGGGGACGTGGTGGCGCTCAGTGTCCCGGTCGCTCTGTGTGACGGTCAGACCCACACGCTCAACGTGACTGTGTTGGGGAACAGCTCTCTGCTGGAGGTGGACGGGCAGCCGGCGCAGACGGAGGGGACGGAGAGCGCAGACGCTCTGGATCTGACGGCGTCTTACAGCACCTTCATAGGAGGCCTTCCTGACGTGTCTCTGGTGTCCGCGCCGGTCTCGGCCTTCTTCACGGGCTGCATGGACGTGCGGGTGAACGGTCAGCTGCTGGACGTGGACGAGGCCCAGCACAAACACAACGACGTCCGCTCTCACTCCTGCCCTCTGCTGGACGCACAGCAATAACAGCAGCTGACGCTCCGCACATACAGCACAGAGCCGCTAGACATGTATTACCCGCTTTAGACCAATCAAACACAAGCTACTGAGAGCGTGCTGTGAGATACTGTAACTGTACATAGGCCACTGTAAAATGCTTTAGAGGAGGATGACTAAAAACACCCGACTACCATTAAAGGCCTTCAGGCTTGATGTAGGTGCTCaacttcatcatcatcatcatcatcatcatcatcgttcGGGGTAGTTAGAGTTTTTTTTAGTCCTTCGTTCGagtttgtctttttattgttgaagttttatattttgttcatgTATGCTTTGTGTGTGAGACTGAAACTAATAAAGGCGGATGGTGTtgttatgatga

Function

symbol description
gas6 Predicted to enable calcium ion binding activity. Acts upstream of or within sprouting angiogenesis. Predicted to be located in extracellular region. Is expressed in heart; nervous system; and neural tube. Orthologous to human GAS6 (growth arrest specific 6).

NR:

description
PREDICTED: growth arrest-specific protein 6

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K05464 GAS6; growth arrest-specific 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246771.1 True 2740 mRNA 0.55 15 2390877 2406287
XM_043246780.1 False 2572 mRNA 0.55 14 2390884 2406287

Neighbor

gene id symbol gene type direction distance location
pros1 pros1 coding upstream 3228 2371927 ~ 2387649 (+)
rasa3 rasa3 coding upstream 19742 2334161 ~ 2371135 (+)
LOC122345332 LOC107698899,LOC107751092,LOC107593812,LOC107580773 coding upstream 80489 2301741 ~ 2310388 (+)
mettl21e zgc:92518,LOC107748343,LOC107665805 coding upstream 90473 2297222 ~ 2300404 (+)
ercc5 ercc5,LOC104958986 coding upstream 94176 2286139 ~ 2296701 (+)
adprhl1 adprhl1,LOC107694472 coding downstream 63186 2469473 ~ 2481559 (+)
creg1 creg1,LOC107751059,LOC107694464,LOC107551109,LOC107739160,LOC107654633 coding downstream 155070 2561357 ~ 2564419 (+)
cd247 cd247 coding downstream 158259 2564546 ~ 2573977 (+)
gpa33a NA coding downstream 241140 2647427 ~ 2654848 (+)
LOC122351317 ildr2,LOC107662109,LOC107751053 coding downstream 249846 2656133 ~ 2676029 (+)
G440 NA non-coding upstream 17721 2372715 ~ 2373156 (+)
G457 NA non-coding upstream 63547 2323285 ~ 2327330 (+)
G439 NA non-coding upstream 114606 2275992 ~ 2276271 (+)
G450 NA non-coding upstream 115536 2275007 ~ 2275341 (+)
G415 NA non-coding upstream 215261 2174322 ~ 2175616 (+)
G463 NA non-coding downstream 14189 2420476 ~ 2421647 (+)
G485 NA non-coding downstream 83196 2489483 ~ 2491877 (+)
G504 NA non-coding downstream 132946 2539233 ~ 2540401 (+)
G505 LOC107751062,LOC107570084,LOC107694469,LOC107551096,LOC107747071 non-coding downstream 134200 2540487 ~ 2542309 (+)
G512 NA non-coding downstream 173029 2579316 ~ 2583647 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other upstream 198413 2185821 ~ 2192464 (+)
LOC122327253 NA other upstream 949211 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 1270156 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1941237 445940 ~ 449640 (+)
G10 NA other upstream 2212677 177716 ~ 178200 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 77353 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 87285 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 105285 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 118238 2524525 ~ 2527244 (+)
G482 dusp27 other downstream 188644 2594931 ~ 2596302 (+)

Expression


Co-expression Network