si:ch211-132g1.6


Basic Information

Item Value
gene id si:ch211-132g1.6
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1331683 ~ 1333824 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248843.1
ACTGCTAAACTGTTTTTTAGGTTGTGACCCACTAGTGGAGAAAAACTGTCCTAGATTATTGTCCCGCTCTGATCGAGAACAGGAAATTCTTTCTGTCAGTTGATTGTGAAAAGGTTCTGGAACGTTTGCTGTTTTCAGAAGAGCAATGAGCTGCAAACGCACTCTCCTATTTCTGTTCCTCTGTGGCTTTGCTGCTCTCTCTGTTTCGGTGAAATGTACACCAGAGCTACTAGAGGGAACATCCTGCACCATCGATCTAGCGTCAAAAAACATTGATAAATCTAAAGAGATCAAATGGGTCCATCTCTCCAGTGAGTTAGTGATTCACAGAAGAAATGGGAAGATCAGGACAAACACTCTCAGTGGAACAAATATAGAAGACAATGGGTCACTAACGTTTCAGAGTGTTAGTCTGAATAACACCggcaaatataaatacagtttatatgCTATTGATGGTACAGAGACAAGCGGGGAAGAGGAAATTCAAGTTTTtgCAAAGGCTCCTAAACCTACCGTGAGGATCGACTGCAAAGATGGTCTTAAACTCATCTGTGACGCTGGAAACCGTACAGATCTGTCTGTATCCTGGTATAAAGAAGCCAAAAGCATGAATATTGGAGAACTGAGCTTGAAATCTGGTCAAGTAGAGGCGAATAAACCGTACTCATGCAGAGTAAGCAATACGGTCAGCAACGAGGAAAGTAACAGCGTTACACCATCAtGTAAAGATGCAGGTACAGGCGCTCCAGGTGAAGCCCTGTTTCCTTCTACACTCTTTGGCTTTGATTTCTGGATCATGGTGAGCATTTTAGCGGGCGGCGGAGcccttctgctgctgctgatatGTGTCCTCATCATCTGTGCATGTCGAAGCTGCAGACGACGCGAGAAGCACACACGTGATGAAGAAGAGATGAGGCTGAGGATTCATACCAAACCAGAGCCAAAAAACGGTGAACAACAGCTAACTACAGATGACAACCTGAGCGTTCATGCTTTCCAAACAGCTTGTTTTTCACAGagctcctaaaaaaaaaaaagctgtaaaaacacGCCGAgatggtttttgttacttataccacaaatatatatatatcctaaaGTACATCAAcgactaaaataaaactctcaAAAGATGCACGCCATGGGACTTTTAACTCAAGGTTGTTACTATAATTAAAACTgaacttaataataatagtactgTCTGCtcatcatgaaaaaaatacaataaaaatctcACCCTTAAAACAAGTA
>XM_043248853.1
CACTGCTAAACTGTTTTTTAGGTTGTGACCCACTAGTGGAGAAAAACTGTCCTAGATTATTGTCCCGCTCTGATCGAGAACAGGAAATTCTTTCTGTCAGTTGATTGTGAAAAGGTTCTGGAACGTTTGCTGTTTTCAGAAGAGCAATGAGCTGCAAACGCACTCTCCTATTTCTGTTCCTCTGTGGCTTTGCTGCTCTCTCTGTTTCGGTGAAATGTACACCAGAGCTACTAGAGGGAACATCCTGCACCATCGATCTAGCGTCAAAAAACATTGATAAATCTAAAGAGATCAAATGGGTCCATCTCTCCAGTGAGTTAGTGATTCACAGAAGAAATGGGAAGATCAGGACAAACACTCTCAGTGGAACAAATATAGAAGACAATGGGTCACTAACGTTTCAGAGTGTTAGTCTGAATAACACCggcaaatataaatacagtttatatgCTATTGATGGTACAGAGACAAGCGGGGAAGAGGAAATTCAAGTTTTtgCAAAGGCTCCTAAACCTACCGTGAGGATCGACTGCAAAGATGGTCTTAAACTCATCTGTGACGCTGGAAACCGTACAGATCTGTCTGTATCCTGGTATAAAGAAGCCAAAAGCATGAATATTGGAGAACTGAGCTTGAAATCTGGTCAAGTAGAGGCGAATAAACCGTACTCATGCAGAGTAAGCAATACGGTCAGCAACGAGGAAAGTAACAGCGTTACACCATCAtGTAAAGATGCAGGTACAGGCGCTCCAGATGAAGAAGAGATGAGGCTGAGGATTCATACCAAACCAGAGCCAAAAAACGGTGAACAACAGCTAACTACAGATGACAACCTGAGCGTTCATGCTTTCCAAACAGCTTGTTTTTCACAGagctcctaaaaaaaaaaaagctgtaaaaacacGCCGAgatggtttttgttacttataccacaaatatatatatatcctaaaGTACATCAAcgactaaaataaaactctcaAAAGATGCACGCCATGGGACTTTTAACTCAAGGTTGTTACTATAATTAAAACTgaacttaataataatagtactgTCTGCtcatcatgaaaaaaatacaataaaaatctcACCCTTAAAACAAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248843.1 True 1260 mRNA 0.41 5 1331683 1333823
XM_043248853.1 False 1108 mRNA 0.40 5 1331683 1333824

Neighbor

gene id symbol gene type direction distance location
si:ch211-132g1.1 NA coding downstream 6890 1318790 ~ 1324793 (-)
ptgfrnb LOC107730397,LOC107555256,LOC107653676,LOC107559799,LOC107677843,LOC107746979,LOC107717917 coding downstream 16145 1277500 ~ 1315538 (-)
slc5a3a slc5a3a,LOC107730390,LOC107677845,LOC107555245,LOC107559792,LOC107746980,LOC107653669 coding downstream 61758 1264771 ~ 1269925 (-)
rap2ab rap2ab,rap2a,LOC105911819,LOC106582448,LOC106512668,LOC101166017,LOC105933629,LOC103391592,LOC105907999 coding downstream 166748 1148672 ~ 1164935 (-)
kpnb3 kpnb3,ipo5,LOC107677849,LOC107653674 coding downstream 194618 1117841 ~ 1137065 (-)
LOC122350472 atp1a1a.3,atp1a1a.4,LOC107718012,LOC107698905,LOC107555258,LOC107717913,LOC107653679 coding upstream 13670 1347494 ~ 1353796 (-)
LOC122350536 atp1a1a.2,atp1a1a.4,atp1a1a.3,LOC107698906,LOC107555259,LOC107717913,LOC107555265,LOC107653679 coding upstream 30718 1364542 ~ 1370987 (-)
atp1a1a.1 atp1a1a.1,LOC107718011,LOC107555257,LOC107698904,LOC107653678,LOC107717912,LOC107568774 coding upstream 59105 1392929 ~ 1402824 (-)
LOC122350642 atp1a1a.4,LOC107717913,LOC107653679,LOC107555265,LOC108429865 coding upstream 70754 1404578 ~ 1412946 (-)
rcan1b rcan1b,LOC107555267,LOC107698909,LOC107568778,LOC107653682,LOC107718018,LOC107709340 coding upstream 108967 1442791 ~ 1455071 (-)
G244 NA non-coding downstream 46874 1282838 ~ 1284809 (-)
LOC122347488 NA non-coding downstream 68480 1256189 ~ 1263203 (-)
G231 NA non-coding downstream 357714 973746 ~ 973969 (-)
G125 NA non-coding downstream 441096 890244 ~ 890587 (-)
G99 NA non-coding downstream 607647 723745 ~ 724036 (-)
G247 NA non-coding upstream 10474 1344298 ~ 1346789 (-)
G260 NA non-coding upstream 107264 1441088 ~ 1441512 (-)
G297 NA non-coding upstream 233214 1567038 ~ 1567532 (-)
G303 LOC107698893,LOC107555241,LOC107751081,LOC107653672,LOC107571885 non-coding upstream 246919 1580743 ~ 1582087 (-)
G304 NA non-coding upstream 250067 1583891 ~ 1584684 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 100036 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 583319 738137 ~ 748364 (-)
G67 NA other downstream 895558 435808 ~ 436125 (-)
G20 NA other downstream 1144598 186420 ~ 187085 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other upstream 258245 1592069 ~ 1604984 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other upstream 1354941 2688765 ~ 2689464 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 1802684 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 2674016 4007840 ~ 4014287 (-)
G820 NA other upstream 2964486 4298310 ~ 4299193 (-)

Expression


Co-expression Network